KEGG   Brachypodium distachyon (stiff brome): 100841533
Entry
100841533         CDS       T01717                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03420  Nucleotide excision repair
bdi04120  Ubiquitin mediated proteolysis
bdi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100841533
   04120 Ubiquitin mediated proteolysis
    100841533
  09124 Replication and repair
   03420 Nucleotide excision repair
    100841533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bdi04121]
    100841533
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100841533
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     100841533
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100841533
  Multi subunit type E3
   SCF complex
    Ring finger protein
     100841533
   Cul2 complex
     100841533
   Cul3 complex
     100841533
   Cul4 complex
     100841533
   Cul7 complex
     100841533
   Cul8 complex
     100841533
   Cul9 complex
     100841533
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100841533
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100841533
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 100841533
NCBI-ProteinID: XP_003569574
UniProt: I1HB59
LinkDB
Position
2:319715..322921
AA seq 126 aa
MSAMETDGPDAPPPAPAPAPAGEGSSAAGPSSSRKSNKRFEIKKWNAVALWAWDIVVDNC
AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
FQKYGH
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtctgccatggagacggacggccccgacgcgccgccgcccgcccccgcccccgccccc
gccggcgagggctcctccgccgccgggccctcctcctcccgcaagtccaacaagcgcttc
gagatcaagaagtggaacgccgtcgcgctctgggcatgggatatcgtcgtcgacaactgc
gccatctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagc
gccaccagcgaggagtgcactgtcgcctggggtgtctgtaatcatgcttttcacttccac
tgcatcagcaggtggctcaagactcgtcaagtgtgcccattagacaacagcgaatgggag
ttccagaaatatggccactag

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