Brachypodium distachyon (stiff brome): 100841533
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Entry
100841533 CDS
T01717
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04120
Ubiquitin mediated proteolysis
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100841533
04120 Ubiquitin mediated proteolysis
100841533
09124 Replication and repair
03420 Nucleotide excision repair
100841533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100841533
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100841533
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
100841533
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100841533
Multi subunit type E3
SCF complex
Ring finger protein
100841533
Cul2 complex
100841533
Cul3 complex
100841533
Cul4 complex
100841533
Cul7 complex
100841533
Cul8 complex
100841533
Cul9 complex
100841533
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100841533
TCR (transcription coupled repair) factors
Cul4-CSA complex
100841533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
100841533
NCBI-ProteinID:
XP_003569574
UniProt:
I1HB59
LinkDB
All DBs
Position
2:319715..322921
Genome browser
AA seq
126 aa
AA seq
DB search
MSAMETDGPDAPPPAPAPAPAGEGSSAAGPSSSRKSNKRFEIKKWNAVALWAWDIVVDNC
AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
FQKYGH
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatggagacggacggccccgacgcgccgccgcccgcccccgcccccgccccc
gccggcgagggctcctccgccgccgggccctcctcctcccgcaagtccaacaagcgcttc
gagatcaagaagtggaacgccgtcgcgctctgggcatgggatatcgtcgtcgacaactgc
gccatctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagc
gccaccagcgaggagtgcactgtcgcctggggtgtctgtaatcatgcttttcacttccac
tgcatcagcaggtggctcaagactcgtcaagtgtgcccattagacaacagcgaatgggag
ttccagaaatatggccactag
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