Bdellovibrio sp. KM01: HW988_02690
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Entry
HW988_02690 CDS
T08445
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HW988_02690 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_02690 (nth)
Enzymes [BR:
bdk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HW988_02690 (nth)
DNA repair and recombination proteins [BR:
bdk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HW988_02690 (nth)
Prokaryotic type
HW988_02690 (nth)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QLY27274
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All DBs
Position
525685..526335
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AA seq
216 aa
AA seq
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MATTVTSKKKAPLEQTISLLKRYYPDAHCALNHRNPFELLVATVLSAQCTDERVNMVTPA
LFEKYPTPLAMSKAPLGSLESLVRSTGFFKNKAKNLKSAATDLVKKYDGEIPQDLEALVG
LAGVGRKTANVVLGNAFDIPSGIVVDTHVTRLSNRLGWVKTENAVQIEKILCKVVPEDDW
ILLSHLLISHGRAICKARKPDCAHCFLETTCPKRGV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacgacggtgacgagtaaaaagaaagctcctctcgagcagactatatccctttta
aagcgctattatcctgacgctcattgcgctctaaaccatcgcaatccttttgaattacta
gtcgccacggttttatccgcacaatgcacggatgaacgcgtgaacatggtgaccccagca
cttttcgagaaatatcccacgccactggccatgtcgaaagctcctttggggagtttagaa
agcctggttcgttccacgggattttttaaaaacaaagccaagaatttgaagtctgctgcc
actgatttggtgaaaaaatatgacggcgaaatcccccaggatcttgaggctttggtcggg
cttgcgggggtaggccgaaaaaccgcgaatgtggttttgggtaacgcatttgatatcccc
agtggcatcgtggttgatacgcatgtcacacgcttgtcgaatcgcctgggttgggtaaaa
accgaaaacgctgtgcagatcgaaaagattttgtgcaaagtggtgccagaagacgattgg
attttgttatcgcatttattgatttcacatggtcgagctatctgtaaggcgagaaaacct
gattgcgctcactgcttccttgagacgacttgcccgaagcgcggagtctag
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