Bdellovibrio sp. KM01: HW988_03200
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Entry
HW988_03200 CDS
T08445
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00300
Lysine biosynthesis
bdk00550
Peptidoglycan biosynthesis
bdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HW988_03200
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HW988_03200
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
HW988_03200
Enzymes [BR:
bdk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HW988_03200
Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
Precursor biosynthesis
Amino acid ligase
HW988_03200
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
QLY26053
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Position
632276..633772
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AA seq
498 aa
AA seq
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MKLQHLFSTIPGIAGHVLPDIEVSGIFNDARKVIADGLFVAIRGVKVDGHSFIPDAINNG
ASVLVVEDPNQVPNNFKGFVLRVENTREALDVLASHYHGDPAEEMFCVGVTGTNGKTSVT
YMVEAIFNHSQNPTGVIGTVNHHLLDKVWPSDMTTPDPINLQKRLREFKDAGAKAVAMEV
SSHALDQHRVDSVPFNTVIFTNLTRDHLDYHETMEKYFESKQRLFTDLLWKTEKLPCFAI
INIDDKYGRRMHVADPAVLWTYGADKSADLSFKIKTMDFALTVFDLKTPVGVTEVELPMS
GTHNVMNAVAAIGAGLSAGIPLDVCKAAIASFTGVPGRLQAVPNNKNLSVFVDYAHSPDA
LENVLTALTKVRESLKSNAKIWTIFGCGGDRDKGKRPLMAEMALKFSDAVVVTSDNPRTE
EPQSIIEDILKGVNAQDKNRVIVLADRKEAIHATIRRAQEGDVILIAGKGHEDYQIIGST
KFPFSDVQVAEQALQGRV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacagcatcttttttcaacaattccaggaatcgccggccatgttttgccagac
atcgaagtctctgggattttcaatgatgcgcgtaaggtgattgctgacggacttttcgtt
gccattcgtggtgtcaaagtcgacggccacagtttcattcctgacgctatcaacaacggt
gcttctgttttggtggtcgaagatcccaatcaagttcccaataactttaaaggtttcgtt
ttgcgcgtggaaaacactcgcgaagcccttgatgttttagccagccactatcacggtgac
cctgcagaggaaatgttctgcgtgggtgtgacgggtacgaacggtaaaacttcagtgacc
tatatggttgaggcgatttttaatcactcgcaaaacccaaccggtgttatcggaactgtg
aaccatcacttgctggataaagtttggccgtcagatatgacaacgccagatccaatcaat
ctgcaaaaacgtctgcgtgaattcaaagacgctggtgccaaggctgtggccatggaagtt
tcctcgcatgcgttggatcagcaccgcgtggacagtgtcccgttcaatacagtgatcttt
acgaatctgacccgtgatcatttggattatcacgaaacgatggaaaaatatttcgagtca
aaacagcgtctgttcacagacctgttgtggaagactgaaaagctgccatgttttgcgatc
atcaatatcgatgataaatacggccgtcgcatgcacgtggcagaccctgcagttctttgg
acatacggtgctgataagtccgcggaccttagtttcaaaatcaaaactatggattttgca
ttgacggtgtttgatttaaaaactcccgtgggagttactgaggtggagttaccaatgtca
ggtactcacaatgtgatgaatgctgtggcagcgattggtgccggtctatcggcaggaatc
ccattggatgtttgtaaagccgcgattgcgagctttacaggggtccccggaagattgcag
gcggtaccaaataataaaaacctttctgtctttgtggactatgcccactcgccagacgct
ttggaaaacgttctgacggcattgacgaaggtgcgtgaaagtctcaagtccaatgccaag
atctggacgatctttggttgtggtggagaccgcgataaaggcaagcgtcccttgatggcg
gagatggctttgaagttctctgatgccgtggtggtcacttccgacaatccacgcaccgag
gagccgcaatctattatcgaagatattttaaagggcgtgaatgcccaggataagaaccgt
gtgatcgttttggcggaccgcaaggaagccattcatgcgacgatccgcagagcccaagag
ggcgatgtgattttgatcgcaggtaaaggtcacgaagactatcagattattggaagcacg
aagtttccattcagtgatgtgcaggtcgccgaacaggcgctgcaggggagagtgtaa
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