Bdellovibrio sp. KM01: HW988_14290
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Entry
HW988_14290 CDS
T08445
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk01501
beta-Lactam resistance
bdk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HW988_14290
01503 Cationic antimicrobial peptide (CAMP) resistance
HW988_14290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdk02000
]
HW988_14290
01504 Antimicrobial resistance genes [BR:
bdk01504
]
HW988_14290
Transporters [BR:
bdk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HW988_14290
Antimicrobial resistance genes [BR:
bdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HW988_14290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
HMA
Motif
Other DBs
NCBI-ProteinID:
QLY24613
LinkDB
All DBs
Position
complement(2945968..2949105)
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AA seq
1045 aa
AA seq
DB search
MRISDISIKNPVFAWMLMFGLMIFGLISFSRMGLSQLPDVDFPTVSVSVTLDGAAPEVME
TQVVDVIESALMGVEGVQSITSSSKTGSATITVEFSLDRNIDLALQDVQAKVSGAQRLLP
DNVDAPTISKTNPDDQPILWLALTYDKGDLEFLMKYARDYLKDRFTTVDGVGDIFLGGYT
DPVLRVFVNTKKLPGYNIAVNDVIDAIKSEHSEVPGGYIETKKSNFNVRTMGEAKTIEEF
KNIVISRRAGSLIQDSTNMVKIGQVADVSMGLDNITRISRFNGEPALGLGIRKQRGTNAV
AVAKAVKAKAEEIQSQLPEGMKIHVNFDSTQFIEKSVGELTHHLILAVVLTSLVCWAFLG
SWSATFNVLLSIPTSLLGAFIGLYFLGYTLNTFTLLGLTLAIGIVVDDAIMVLENIFRYN
EEGHGQIESAILGAREISFAAMAATAAVIAIFLPVAFMKGIIGKFLMQFGVTISIAVFLS
LVESLTITPMRCAGFVHHGERTTKIGKAFEAFMDSLKVGYERWLRKTLQMRWKVIIGSLV
FVALSFISVKFLVKEMSPAQDQSIFLARLILPVGSSLAYTDGQVKQAEEWLRSRPEVKQV
FASIGGFGGGISDANTAMMFITMKEFKERPIDQKTGKRMTQTDFMQVTREAFGKIQDVRP
VLMDMSQRGFSSGRGYPIEFTVMGSDWEKLAGYSQKIMDEMTKTGLMVDVDSNYLLGMPE
IQVKPDRVSAAQHGVSIAAVGTTVNALIGGVKAGEYPDGGHRYDIKVKLDNKEDAMVEIK
KLLIGNNRANLVPISRVTTQETTKALQSISRMNRQRAITITANLKAGASQQAAMDKILEI
GKKTLEPGYMIEQQGSSKTFKESIQSFFLAFILGIVIAYMILASQFNSFIDPATILLALP
LSFSGAFFALLLTGQSLNMYSAIGFLLLMGIVKKNSILLVEFTNTVRDRGALNADNALLE
ACPIRLRPILMTSIATIAAAVPSAMATGAGSETMRPMALCLIGGVLVSTILTLFVVPAAY
SISDRFRKRDKVREQTKQAFAAVGE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttcggatatttccatcaagaacccagtcttcgcatggatgttaatgtttgga
ttgatgattttcggtttgatctcgttttcaagaatgggtttaagccaattacctgacgtg
gattttcccacagtttcggtcagcgtaactttggatggtgcggctccagaagtaatggag
actcaggttgttgatgtcatcgaaagtgctttgatgggagtcgaaggtgtccaaagcatc
acttccagcagcaaaacagggtctgcaacaattaccgtagaatttagtttggaccgcaat
atcgatctcgctttgcaagatgttcaggcaaaagtttcaggtgcgcagcgattacttcct
gacaacgtcgatgctccaaccatttcaaaaacgaatcccgacgaccaacccattttgtgg
ttggcacttacttacgacaagggtgaccttgaattcctgatgaaatacgcgcgcgactat
ttgaaagatcgttttacgacagtggatggcgtgggtgatattttcctgggtggttacacg
gatcccgtgcttcgcgtattcgtaaatactaaaaaacttccgggttataatattgcagtg
aatgacgtgatcgatgcgatcaagtctgagcactctgaagttcccggtggttacattgaa
actaagaaaagcaatttcaacgtgcgtacgatgggtgaggcaaaaaccatcgaagagttt
aaaaacatcgtgatcagccgtcgtgccgggtctttgattcaagattccacgaacatggta
aagatcggtcaagtggccgatgtcagcatgggtcttgataacatcactcgtatttctcgc
tttaacggcgagccggcgttgggattaggtattcgtaaacagcgtggtacgaatgccgtg
gctgtcgcgaaagcggtgaaggccaaagcggaagaaattcagtcgcaactgccggaaggt
atgaaaattcatgtgaacttcgacagtactcagttcattgaaaaatccgtgggtgagttg
acgcatcacttgatcttggccgtggttttgacgtctttggtttgttgggcgtttttaggg
tcgtggtctgcaacattcaacgttttactttctattccaacttcgttgttaggtgccttc
atcggtttgtatttcctgggatacacgttgaacacgttcacgttgctaggtttgactctc
gccatcggtatcgtcgtcgacgatgccatcatggttctggaaaatatctttaggtataac
gaggaagggcacggacagattgaatccgcgattcttggtgcgcgtgagatttcttttgcg
gcaatggcagcaacagcggccgttatcgcgatcttccttcctgtggcgttcatgaagggg
atcattggtaagttcttgatgcaattcggggtgacaatttccatcgccgtgttcttgtca
ttggtggaatccctgacaatcacgccaatgcgttgtgctggtttcgttcaccacggtgag
cgtacgactaaaatcggtaaagcgtttgaagctttcatggattctttgaaagtgggctat
gaaagatggttgcgcaaaactttgcaaatgcgctggaaagtcatcatcggttctttggta
ttcgtggctttgtcatttatctctgttaaattcctggtgaaagaaatgtcacccgctcaa
gatcaaagcattttcttggcgcgtttaatattgccggtgggaagttctcttgcttataca
gatggtcaagttaagcaagcggaagagtggttgcgttctcgccctgaagtaaagcaagtc
tttgccagcatcggtggtttcggtggcggtatctctgacgccaataccgcgatgatgttt
atcactatgaaagagttcaaagagcgtccgattgatcaaaaaacgggtaagcgcatgacg
caaactgatttcatgcaggtgactcgtgaggcgttcggtaaaatccaagacgtgcgcccg
gtactgatggatatgtcccaacgtgggttctcaagtggtcgtggttatccgattgaattt
accgtcatgggttctgactgggaaaagcttgcgggctattcgcaaaagatcatggatgaa
atgactaagaccggtttaatggtcgacgtcgattccaattaccttttgggtatgccagaa
attcaggtaaaaccagatcgcgtttcagcggctcaacatggtgtgagcatcgcagctgtc
gggacgacggtgaatgctttgatcgggggagtgaaagccggggagtatcctgacggtggt
caccgctacgacatcaaagtgaaattggataataaagaagacgcgatggttgagatcaaa
aagttgttgattggaaacaaccgcgcgaacttggttccaatctctcgcgtgacaacgcaa
gagacgacgaaggctttgcaaagtatctcacgtatgaatcgtcagcgtgcaattaccatt
actgcgaacttaaaagccggtgcttctcagcaggcagcgatggataagattttggaaatc
ggtaaaaagactttggaaccgggttacatgatcgagcagcagggttcttcgaaaaccttc
aaagaatcgatccaaagtttcttcctagcattcatcttgggtatcgtgatcgcctacatg
atcttggcttcccaattcaactcgttcatcgatccagcgacaatcttgttggcattgcca
ctaagtttctcgggtgcgttctttgccttgttgttaacgggccaatctttgaacatgtac
tcggccatcggattcttgctcttgatgggtatcgtgaaaaagaactcgatcttgttggtt
gaattcacgaacaccgttcgtgatcgtggtgcactgaatgcggataatgcattattggaa
gcatgtccaattcgtcttcgtccgatcctgatgacgtcgatcgcaacgattgccgcggcg
gttccctctgcgatggcaaccggtgccggttccgaaacaatgcgcccaatggccttgtgc
ttgatcggtggggttttggtttccacaatcttgactttgttcgtagtgccagcagcgtac
tcgatctccgacagattcagaaaacgcgacaaagtccgcgagcaaaccaaacaagccttc
gccgccgtcggcgaataa
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