Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1561
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Entry
BBDE_1561 CDS
T04222
Name
(GenBank) isoleucyl-tRNA synthase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBDE_1561
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdn01007
]
BBDE_1561
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdn03016
]
BBDE_1561
Enzymes [BR:
bdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
BBDE_1561
Amino acid related enzymes [BR:
bdn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
BBDE_1561
Transfer RNA biogenesis [BR:
bdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BBDE_1561
Prokaryotic type
Other AARSs
BBDE_1561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
BAQ27555
LinkDB
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Position
complement(1847017..1850343)
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AA seq
1108 aa
AA seq
DB search
MSETTNHVYPKAAAGEQSANVAPNPSFPKLEESVLDYWEKDDTFAKSVERRPSGDHSQNE
FVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKEL
GIDSVDQIKEIGIDKFNDACRASVLKYTNEWKDYVHRQARWVDFEHGYKTLNIPYMESVM
WAFKQLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKLRDEED
AYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGRFAGKKFYLGKPLLGSYAKELGENY
EIVRELKGAEMEGWRYYPVFPYFAGDEHAAEGQVPGPEGYQIFTADYVDTVEGTGLVHQA
PYGEDDMNTLNAKGIKSVDVLDAGCKFTSLCPDYEGQYVFDANLPILRNLRAGDGPLARV
PEDQRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKDRLLELNQQINWIPDN
VKDGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLEELKADFGDYPRD
HEGNVNMHRPYIDELTRVNPDDPTGKSHMRRITDVMDCWFESGSMSFAQYHYPFENKETF
EQHFPCDYIVEYIGQTRGWFYVLHIMATALFDKPAYKNVICHGIVLGSDGQKMSKHLRNY
PDVNGVFNDFGSDAMRWFLMSSPILRGGNLIVTADGIRDTVRQVMLPVWSSYYFFTLYAN
AANGGAGFDARSLRADEVAALPEMDRYLLARTRRLIEKTQAALDDFLISDACEAVSDFID
MLTNWYIRNNRDRFWNEDENAFNTLYTVLEAFMRVIAPLAPMEAEAVWRGLTGGESVHLA
DWPFLADPTSGEATELGRVLVDDPALVDAMEKVREVVSSTLSMRKAKQIRVRQPLSKLTV
IVSDPDAVAAYAEILKSELNVKDVELCTLEDAESRGLKIINELRVNARVAGKRLRKDVQF
AIKASKSGAWHVDASGVPVCETPNGEIALEEGEYELINSVEEKNAEEAASSVSAALPTGG
FVILDTELNDDLIAEGYARDVIRAVQDARKAADLEISDRIALKLTVPTGDVAKVEQFKDL
VASETLATSFEVVAGAEGSELAVEVAKA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaaccaccaatcatgtgtatccgaaggctgctgccggtgagcagagcgccaac
gtcgcgccgaaccccagcttcccgaagctggaggagtccgtgcttgactattgggagaag
gacgataccttcgccaagtccgtcgagcgtcgtccatccggagatcacagccagaatgaa
ttcgttttcttcgacggtccgccgttcgccaatggtctgccgcattatggccatctgctg
accggctatgccaaggatgtgattccgcgctaccagaccatgaagggccgcaaggtcaac
cgcgtgttcggctgggatacgcacggtctgccggccgagctcgaggcgcagaaggaactg
ggcatcgactccgtcgaccagatcaaggaaatcggcatcgacaagttcaacgacgcctgc
cgtgcctccgtgctcaagtacaccaatgagtggaaggactacgtgcaccgtcaggcgcgc
tgggtcgatttcgagcatggctacaagaccctgaacattccgtacatggaatccgtgatg
tgggccttcaagcagctgtatgacaagggcttggcctatcagggctaccgtgtgctgccg
tattgcccgaaggatcagacgccgctttccgcacacgagctgcgtatggacgccgacgtg
taccaagaccgtcaggacaccaccgtgtccgtggccgtgaagctgcgcgacgaggaagac
gcctacgccgtattctggaccaccaccccgtggaccgttccgaccaacttcgccatcgtg
gtcggcgccgacatcgactatgtcgaagtacgtccgaccgaaggcaggttcgccggcaag
aaattctatctgggcaagccgctgctcggctcctatgccaaggagcttggcgagaactat
gagatcgtgcgcgagctcaagggtgccgagatggagggttggcgctactatccggtcttc
ccgtatttcgctggcgacgagcatgccgccgagggtcaggttccggggccggaaggctat
cagattttcaccgccgattacgtcgataccgtcgaaggtacgggcctcgtgcatcaggct
ccgtacggcgaggacgatatgaacacgctcaatgccaagggcatcaagagcgtggacgtg
cttgacgcgggctgtaagttcacgtcgctgtgcccggattacgagggtcagtatgtgttc
gatgcgaatctgccgattctgcgtaacctgcgtgcaggcgatggtccgctggcccgtgtg
ccggaggaccagcgcgcgattctcttccaggagaagagctacgtgcactcctatccgcac
tgctggcgttgcgccaccccgctgatctacaagccggtgagctcttggttcgtgtccgtg
accaagatcaaggaccgtctgctcgagctcaaccagcagatcaactggattccggacaac
gtgaaggatgggcagttcggcaagtggcttgccaatgcccgcgactggtccatctctcgt
aaccgtttctggggttcgccgattccggtgtgggtatccgacgatccgaagtatccgcgc
gtcgacgtgtatggctcgcttgaggagctgaaggccgacttcggtgattatccgcgcgat
catgaaggcaatgtcaacatgcatcgcccgtatatcgacgaactgacccgcgtcaacccg
gacgatccgaccggcaagagccacatgcgccgcatcaccgacgtaatggactgctggttc
gaatccggttccatgagcttcgcccagtaccactatccgttcgagaacaaggaaaccttc
gaacagcacttcccgtgtgactacatcgtggaatacatcggccagacccgtggctggttc
tatgtgctgcacatcatggccaccgccctgttcgacaagccggcatacaagaacgtgatc
tgccacggcattgtgctcggttccgacggtcagaagatgtcgaagcatctgcgcaactat
ccggatgtgaacggcgtgttcaacgacttcggttccgacgctatgcgttggttcctcatg
agttcgccgatcctgcgtggcggcaacctcatcgtgaccgccgacggcatccgcgatacc
gtacgtcaggtgatgctgccggtgtggagctcctactatttcttcaccctgtatgccaac
gcggctaatggcggtgccggtttcgacgctcgttcgctacgtgccgacgaggttgccgcc
ttgccggaaatggatcgttacctgctggcccgcacccgacgtctgatcgagaagacccag
gctgcgctggatgacttcctgatttccgacgcctgcgaagccgtgtccgatttcatcgac
atgctcaccaactggtacattcgcaacaatcgcgaccgcttctggaacgaggacgagaac
gcgttcaatacgctgtacaccgtgcttgaggcattcatgcgcgtaatcgccccgcttgct
ccgatggaggccgaagccgtgtggcgtggcctgaccggcggcgagtccgtgcatctggcc
gattggccgttcctggctgatccgacttctggcgaggcgaccgaacttggtcgcgtgctg
gtggatgatccggccttggtcgatgctatggagaaggtacgcgaggtcgtttccagcacg
ctgtccatgcgtaaggcgaagcagattcgcgtgcgccagccgctttccaagctgactgtg
atcgtctccgatcctgatgccgttgctgcctacgccgaaatcctgaagtccgagctcaac
gtcaaggatgtcgagctgtgcacgcttgaggatgccgaatcccgcggcctgaagatcatc
aacgagctgcgcgtgaacgcccgagtcgcaggtaagcgtctgcgcaaggacgtgcagttt
gccatcaaggcttccaagtccggtgcctggcatgtcgatgcctccggcgtgccggtgtgc
gagactccgaacggtgagattgcactggaagagggtgaatatgagctgatcaacagcgtg
gaggagaagaacgccgaagaggccgccagctccgtgtccgctgcgctgccgaccggtggt
ttcgtgattctcgacaccgagttgaacgacgacctgattgccgaaggctatgctcgcgac
gtgatccgtgccgtgcaggatgcccgcaaggctgccgatctggagatctccgaccgtatt
gcgttgaagctgaccgttccgacgggtgacgtggcgaaggtcgagcaattcaaggatctt
gtggcttccgaaacgcttgccacctccttcgaggttgtggccggcgccgagggctccgag
ttggcagttgaggttgccaaggcctga
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