Bactrocera dorsalis (oriental fruit fly): 105222641
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Entry
105222641 CDS
T09719
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105222641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdr03400
]
105222641
Enzymes [BR:
bdr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105222641
DNA repair and recombination proteins [BR:
bdr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105222641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
105222641
NCBI-ProteinID:
XP_049310837
UniProt:
A0ABM3JNM4
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All DBs
Position
4:complement(37987427..37991071)
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AA seq
923 aa
AA seq
DB search
MDISKNIKFSEACNILQRIQKATSPAAKEKLVRHYYESFQKFRLLFRERVGLTAADREDG
GTSFYCILRCLVPREDMSRKAYGLQVSTLGSVYTEVLQLNKDSRDAKLLQARTYNGSSND
FAEILREVLLLRAGNGKGMSDLSLYDVHQMLDTIAEGDRQDTKKVLTSLAEVATSAEQMW
FVRLLLKNLRLGIGEQRIFAIIHPQARDLLRRCSDLKRVCCLLANNEISHEPLTDQPNET
KNPINTFNLNNIVQPFQHIKAMLCEMFHGSLEQLMAEDVLYLETKMDGERFQLHYENERF
KYISRNGIDYTDSFGADFMTGSLTPSLQTLLPNNLQSIILDGEMMVYDMQRKCYRDKGEN
TDVKHLNKRQNWRPCFVVYDVLYYNGSSLLEMPYVQRCQRVVELVSREELGILQIMRPIK
LTSAAQFQELFQQALDAQAEGVVLKKQNSIYQPGIRNGGGWYKIKADYITGLTTEFDLLV
IGGFYNKTRTFIQSFLLGVLKYNSETQYEVYSVGKVDNRTRQRAILNDTLKQHWHDCKRE
PPPSWYHYKQSSADGRPDVWIEPNKSVILQIRATDLAPSSAFALSKSLHFPRVEMWRNDK
LWHECLSWHNYMTMIQGESGLTKIHKRQVELSDLLLPQKKRKLTAAERRKLGALSYERRF
DPAEVKQRSNLFEGFSFCILSASLKTGYTPEALKALVVTNGGEIVENPLQDPRCISVAGD
ITFRVETLCKSRRYSIAKLSWLVNTCEKQELELTPIDMICTTEELEAEFSKIFDKYGDSY
SQCTDVDNLMRVLEGIKDEDIAVAQSSATDLAELETLLFDESVDYFKNCNAAFYSIDQQT
KLARLIFTYFGGKCLDVNASNFQSIKYVLVNINLIDKVKLKAWIAERFKNYLGNLYVVNI
AWIFHSQRANRKLDILEYMWSEI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcgaaaaatatcaaattttctgaagcgtgtaatatcctacagagaatacaa
aaggctacaagtccagctgcaaaagaaaaactagtacgccactattacgaatcatttcaa
aagtttcgtcttttattccgtgaaagagtgggactgactgcagcagatcgagaggatggc
ggtaccagtttctattgcatccttagatgtctagtaccccgtgaggatatgtctcgtaaa
gcatatggactccaagtcagtacgcttggtagtgtctacacagaagtgctacaactaaat
aaagattcccgcgatgcaaagcttttacaagcgcgtacctataatggttctagcaatgat
tttgcagagattttgcgcgaagtgctgttgctgcgagccggtaatggcaaaggcatgagt
gacctgtcgctttatgatgtgcatcagatgttagatactatagcagagggtgatcgccag
gacacgaaaaaggtattaaccagcctagcagaggtagcaacgtccgcagagcaaatgtgg
ttcgtacgtttactgctaaagaacctgcgtctgggtattggcgaacaacgtattttcgcc
atcatacatccgcaagcaagagatctccttagacgttgctcagatttgaaacgcgtctgc
tgtttgctggcaaacaacgaaataagtcatgaacctttaaccgaccaaccaaacgaaact
aaaaatcctatcaacactttcaatctaaataacatcgtacaaccgtttcaacatataaaa
gctatgttatgcgaaatgtttcatggcagcttggagcaattaatggctgaggatgtgctt
tatttggagaccaaaatggatggtgaacgttttcaattgcattacgaaaatgaacgtttc
aaatatatatcacgtaatggcattgactacactgatagtttcggtgcagactttatgacc
ggatcattgacaccatcgctccaaacactattaccgaataatctacaatcaataattctc
gatggcgaaatgatggtgtacgatatgcagcgaaaatgctaccgcgacaaaggcgaaaat
acagatgtcaagcatttgaataagagacaaaattggagaccttgtttcgtggtctatgat
gtgctatattataacggtagcagcttactggaaatgccctacgtgcagagatgccaaaga
gttgttgaactagtaagcagggaagagcttggtatattgcaaataatgcgtccaatcaaa
ttaacatcggcagcgcagttccaagagctttttcagcaagcgctagatgcgcaggcggag
ggggtagtgctgaaaaaacaaaactccatctaccaaccaggcatacgcaatggtggcggt
tggtacaagataaaggccgattacatcactggcttgaccactgaattcgatttactggtc
attggtggtttctacaataaaacgcgcactttcatacaatccttcttgcttggcgtactc
aaatacaactccgaaacacagtacgaagtttatagcgttggcaaagtggacaatagaaca
cgccagcgggcaatattgaatgacacactcaaacaacattggcacgattgtaagcgggag
ccaccaccgagctggtatcattacaagcaaagcagtgctgacggccggcccgatgtgtgg
atcgaaccaaataagtccgtcatactgcaaatcagggcaaccgatctagcgccttcttcg
gctttcgccttgtctaaatcattgcattttccgcgcgtagaaatgtggcgcaacgacaaa
ctgtggcacgagtgcctctcgtggcataattacatgacaatgatacagggggaaagtggt
ctcacgaaaatccacaagcgccaagtggaattgagtgatttgttattgccgcaaaagaag
cgtaaattaacagcggccgagcggcgcaaattgggcgctttatcctatgaacgccgtttc
gatccagctgaggtaaaacagcgctccaatttgtttgagggcttctcattttgcatactg
agcgctagcttgaaaaccggttacacgccagaggcactcaaagcgttggtggtcaccaat
ggcggtgagatagtcgagaatcccttacaggaccccagatgcatatcagtggcgggcgat
atcacatttcgtgtggagactttatgcaaatcgcgccgttatagcattgccaaactaagc
tggctggtgaacacctgtgaaaagcaagagttggaattaacgccaatcgacatgatttgc
acgacggaagagctggaggctgaattctccaaaatattcgataaatatggtgactcatac
agtcagtgcacggatgtggacaatttaatgcgtgtgctggagggcataaaggacgaagac
atcgctgtcgcgcagtcatccgccaccgatttagccgaacttgaaacgttgttgtttgat
gaatccgtcgattattttaaaaattgcaatgctgcattttatagcatagatcagcaaacg
aaattggcgagattgattttcacgtatttcggcggcaagtgcttggacgtaaatgcatcc
aactttcaaagcatcaaatatgtgctggtcaatataaatttgattgataaagttaaattg
aaagcgtggattgccgagcgtttcaagaattatttaggcaatctttatgtcgttaacatt
gcttggatatttcattcacaacgcgccaacaggaaactcgatatacttgagtatatgtgg
agcgaaatttaa
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