Bactrocera dorsalis (oriental fruit fly): 105233935
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Entry
105233935 CDS
T09719
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105233935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105233935
Spliceosome [BR:
bdr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105233935
Complex C
U5 SnRNP specific factors
105233935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Roc
Septin
Ras
TniB
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
105233935
NCBI-ProteinID:
XP_011214413
UniProt:
A0A034VA86
LinkDB
All DBs
Position
2:28071994..28077069
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AA seq
975 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDEDDDQSIYGQQEPQDEQDEDAMDEEEEHQDDEDKEVTAVV
LHEDKRYYPTAIEVYGPDVETIVQEEDAQPLDKPLIEPIKKLKFQIKEQELPETTYNMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFEQAEERTLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSFLMNVFDTPGHVNFSDEVTAAMRMCDGIVLFVDAAEGVMLN
TERLLKHAVQEKMAITVCINKIDRLVLELKLPPQDAYFKLKHIVEEINALLSTYGNGNDN
LLVSPALGNVCFASSLYGFCFTLKSFAKLYADTYDGVNYVEFAKRLWGDMYFHSKSRKFT
KKPPHNSAQRSFVEFILEPMYKVIAQVVGDVDTTLSDTLAELNIRITKEEMKSNIRPLLR
LVCNRFMGDFNGFVDMCVEHISSPLDNAKRKVDHIYTGPKEGEIYKDMMECNQNGTLMVH
SAKMYPTDDCTFFQVMARVISGTLHAGHEVRVLGENYTLQDEEDSRVLQVGRLWVYEARY
KVELNRVPAGNWVLIEGIDQCIVKTSTIVDINAPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKANKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENEVVSINWNKKRIGEF
FQVNYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKNLLTSVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDAVIAGEALHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLLNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggatttgtatgatgagtttggcaactacattggccctgagttagacagtgat
gaagatgatgaccaaagcatttacgggcaacaagaaccgcaggacgaacaagacgaggat
gctatggatgaagaggaggagcaccaagatgacgaagataaagaagtgacggcggttgta
ttgcatgaagacaaacgttactatcccacagcaatcgaagtgtatgggcctgacgtggaa
actattgttcaagaggaagatgcgcaaccactcgataagccacttattgaacccattaaa
aaacttaaatttcaaattaaagaacaagaacttcctgaaaccacgtataacatggaattc
atggcagatttgatggacacaccaccattaatacgaaatgtcgcactggtggggcaccta
catcacggaaaaactacatttgtggattgtttaatacgtcagacccatccacaattcgaa
caagctgaagagcgcacacttcgctacactgatacactatttaccgagcaggagcgcggt
tgtagtatcaaagccacacctgtgactttagttttgcaggatgtaaagcaaaaaagcttt
ctgatgaatgtttttgatacgcccggtcatgtgaatttttcggatgaagtgacggctgcc
atgcgtatgtgcgatggtattgtgttatttgtagatgctgccgaaggtgtaatgctgaat
actgaacgcttgctgaagcatgcagtacaggagaaaatggcaataactgtttgcatcaat
aagattgatcgtttggttttggagttgaaattaccaccacaggatgcatatttcaaactc
aaacatattgtggaagaaataaatgcgttgttgagcacttatggcaatggcaatgacaac
ttgctagtttcaccggctttgggcaatgtgtgcttcgctagttcgctgtatggtttttgt
tttactttgaaatccttcgcaaaactttatgcggacacttatgatggtgttaattacgta
gaattcgccaagcgtttgtggggtgatatgtacttccacagtaaatctcgtaagtttact
aagaagcctccgcataactcagcacaacgtagttttgtcgagtttattttggaacccatg
tataaggttattgcccaagtcgttggcgatgttgacactacactctccgatacattggct
gagctgaatattcgtatcactaaggaggaaatgaaatcgaatatacgcccacttttacgt
ctagtgtgcaatcgctttatgggtgatttcaatggctttgttgatatgtgtgtggagcac
attagttcgccactggataacgctaaacgtaaggtggatcacatatatactggaccgaaa
gaaggcgaaatttataaagatatgatggaatgcaatcaaaatggcacattaatggtgcac
agtgctaaaatgtatcccacagacgactgcacatttttccaagttatggcgcgtgtaatt
tccggcacgttgcacgccggtcacgaagtgcgtgtgctgggtgaaaattacaccctgcaa
gatgaagaggactcccgtgttttgcaagtgggtcggttgtgggtatacgaagcacgctac
aaagtggagttaaatcgtgtaccggctggaaattgggtactaattgagggcattgatcag
tgtattgttaagacatccactattgtggacataaatgcgcctgaagacttgtacattttc
cgaccgttgaaattcaatacacagagtattataaaaatcgccgtggaaccggtgaatcct
tcggagttaccgaaaatgttggatggcttacgtaaagctaataaatcttatccgttgtta
tcgacacgtgtggaggaatccggagagcatgtcatcctgggcactggcgagctttatttg
gattgtgtgatgcacgatttgcgtaaaatgtattcggaaattgacatcaaagttgccgat
cctgtggtagcattctgcgagactgtggtggaaacaagttcgctgaaatgtttcgctgag
acaccaaataagaagaacaagatcaccatgatttccgagccgctggaaaaaggactcgcg
gaggatatcgaaaatgaagtggtgtcaattaattggaataaaaaacgaattggcgagttt
ttccaagtaaactatgattgggatttgctggcagcacgttcaatatgggcattcggacca
gatgcaactggaccaaacattctggttgatgatacactgccatccgaagtagataaaaat
ttacttacctcggttaaggactctatagtacaaggtttccaatggggtacgcgtgaggga
ccgctttgcgaggagcccatacgtaatgtgaaattcaaaatattggacgctgtaatagct
ggcgaagcgttgcatcgtggtggtggccaagtcatacccacagcacgtcgtgttgcatac
tcagctttcctcatggctacgccgcgtttaatggaaccgtatttgttcgtagaagtacaa
gcgccagccgattgcgtgtcggctgtatacacagttttagccagaaggagaggtcatgta
acacaagacgctccagtttctggttcacctctctacaccattaaagcatttataccagcc
attgactcgttcggtttcgagaccgatttacgtacacatacacagggacaggccttctgc
ttgtccgtatttcatcattggcagattgtaccaggtgatccgttggataagtctatagtg
ataagaccattagagccgcaacaagcttcgcacctggcgcgtgaatttatgataaagacg
agacgtcgcaagggcttgtcagaggatgtttctatcaacaaattcttcgatgatcctatg
ttgttggaattggcgcgacaagatgtgctcctcaattatccgctataa
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