Bradyrhizobium dasycarpae: ACETMP_23975
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Entry
ACETMP_23975 CDS
T11709
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bdy Bradyrhizobium dasycarpae
Pathway
bdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACETMP_23975 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdy03400
]
ACETMP_23975 (nth)
Enzymes [BR:
bdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACETMP_23975 (nth)
DNA repair and recombination proteins [BR:
bdy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACETMP_23975 (nth)
Prokaryotic type
ACETMP_23975 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
UCC1_N
Motif
Other DBs
NCBI-ProteinID:
XHA09741
LinkDB
All DBs
Position
5005573..5006370
Genome browser
AA seq
265 aa
AA seq
DB search
MAKITRKPAPHKAPVPKQKAKAVAAKPKPVKTKPIKTSAPAKKSLKATKPNSSRPWTPAE
VYDAFSRFRKANPEPKGELEHVNPFTLLVAVVLSAQATDAGVNKATRALFEVADTPQKML
DLGEERLRDYIKTIGLYRTKARNVIALSAKLLSEFGGEVPRTRAGIESLPGAGRKTANVV
LNMAFGEHTMAVDTHVFRVGNRTGLAPGKTPLEVELGLEKVIPAAFMLHAHHWLILHGRY
TCLARKPRCEVCLINDLCRWPEKTV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatcacccgcaagccggccccgcacaaagcgcccgtgcccaagcagaaggca
aaggccgtcgcagcgaagcccaagcccgtcaagaccaagcccatcaagacatcggctccg
gcgaaaaaatcgctcaaggccaccaagcccaattcctcgagaccctggacgccggccgag
gtctacgacgccttcagccgcttccgcaaagccaatccggagccgaaaggggagctcgag
cacgtcaatccgttcacgctgctggtcgccgtggtgctgtcggcgcaggcgaccgatgcc
ggcgtcaacaaggccacgcgcgctctgttcgaggtcgccgataccccgcagaagatgctc
gacctcggtgaggagcgcttgcgcgactacatcaagaccatcggcctctaccgcaccaag
gcgaggaacgtgatcgcgttgtcggcaaagctgctcagcgagttcggcggcgaggtgccg
cgcacgcgcgctgggatcgagtcgctgcccggcgccggccgcaagaccgccaacgtcgtg
ctcaacatggccttcggcgagcacaccatggcggtcgacacgcacgtcttccgcgtcggc
aaccgcacggggctggcgcccggcaagacgccgctggaggtcgagcttggtctggaaaag
gtgatcccggccgcgttcatgctgcatgcccatcattggctgatcctgcacggccgttac
acctgcctcgcccgcaagccgcgctgcgaggtctgcctgatcaacgatctctgccgctgg
ccggagaagacggtctga
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