Pseudobdellovibrio exovorus: A11Q_2021
Help
Entry
A11Q_2021 CDS
T02492
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex00300
Lysine biosynthesis
bex00550
Peptidoglycan biosynthesis
bex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A11Q_2021
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A11Q_2021
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bex01011
]
A11Q_2021
Enzymes [BR:
bex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A11Q_2021
Peptidoglycan biosynthesis and degradation proteins [BR:
bex01011
]
Precursor biosynthesis
Amino acid ligase
A11Q_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Gam
Motif
Other DBs
NCBI-ProteinID:
AGH96237
UniProt:
M4VA05
LinkDB
All DBs
Position
complement(2058590..2060086)
Genome browser
AA seq
498 aa
AA seq
DB search
MKLQQLFSYFGSLESNTTTEGILQQEIESICFDARQVKPNSVFVALKGGAHDGHDYLEQA
ITAGAVALVVENKSKIPEGYPYFVFEVPDTRQALDLLAARFYGFPSQDLFCFGVTGTNGK
TSITYILEHILNHQNRLTGVMGTVNHRIGEQVWESQMTTPDAVTLQSRLKDFLDAGGKAA
ALEVSSHALEQRRAHSVHFNTVIFTNLTLDHLDYHKDMANYFSAKQKLFTDLMWMSVKIP
KFAVINTDDPYGRRLRVAEEVIAWTYGKDEADFQFRILNMSFTETEFQVRTAVETIKAVL
PVSGEHTIYNIVASAVAALSCGISLEKSFEALKSFHGVPGRLQRVDSLSSKTVFVDYAHT
PDALENVLKALQSVRKNSKLNNKIITVFGCGGDRDRSKRPLMAAIAAKMSDFVVVTSDNP
RTEDPQAIVDEVVKGLPPNFSHVIVEVDRDLAIKKAIEQAADDDVILIAGKGHEDYQIIG
TEKRHFSDFEVARNHLNN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcagcaattgttttcttatttcggtagcctcgaatctaatacgaccacagag
ggtattttacagcaagaaatagagtcgatttgcttcgatgcgcgtcaagtaaaaccgaat
tcggtttttgtagcccttaaaggcggtgctcacgatgggcacgactaccttgaacaagct
attacagccggagctgtagccttagttgttgaaaataaaagcaagattcccgagggctat
ccctattttgtctttgaagtgccagatacaaggcaggcattggatttattggccgcgcga
ttctatggttttccctctcaagacctcttttgttttggcgttacgggcactaatggcaag
acttcgattacctatattctagagcatatactcaatcatcagaatcgtctgacaggtgtg
atgggaacggtcaatcatcgaattggggaacaagtgtgggaatcgcaaatgaccactccc
gatgcggtcacgttacagtcgcgcttgaaggattttttggatgctgggggaaaagcggct
gcgctagaggtttcttcgcatgctcttgagcaacgacgtgcccacagcgtgcatttcaat
actgtgatttttacgaatttaactttggatcacttggactatcacaaggatatggcgaat
tatttttcagccaaacaaaaactattcacagatttaatgtggatgagtgtgaaaatccct
aagttcgcggtgatcaatacagatgacccgtatggacgccgcctgcgcgttgccgaagaa
gtgatcgcatggacttacggaaaagacgaagcagattttcaatttagaattttaaatatg
agttttactgaaactgagtttcaagtgcgtaccgcagttgaaacaattaaggctgtattg
ccggtttcaggtgaacacacgatttataatatcgtcgccagcgcggtggcggcgctttct
tgtgggatcagcttagaaaaaagttttgaagctcttaaatcatttcatggagttccgggg
cgtttgcagcgggtggactctttatccagtaaaacagtttttgtcgactatgcccacacg
ccggatgccttagagaatgtcttaaaagctctgcaaagcgtgcgtaaaaattctaaattg
aataataaaatcatcactgtatttggctgtggcggagatcgcgatcgctcgaaacgcccc
ttgatggcggccattgcagcgaagatgagtgattttgttgtggtgacttcagataatccg
cgaacagaagatccgcaagctattgtggatgaagtggtgaaaggactaccaccgaatttt
tcgcatgtgattgtagaagtggatcgtgatctggcaattaaaaaagcaatcgagcaagcg
gcagatgatgatgtgattttgattgcgggtaaaggtcatgaagactatcagattatcggt
accgaaaagcgacacttcagcgattttgaagtggcacggaaccacttgaataattaa
DBGET
integrated database retrieval system
