Bacillus freudenreichii: NCTC4823_02059
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Entry
NCTC4823_02059 CDS
T06767
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4823_02059 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02059 (nth)
Enzymes [BR:
bfd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC4823_02059 (nth)
DNA repair and recombination proteins [BR:
bfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC4823_02059 (nth)
Prokaryotic type
NCTC4823_02059 (nth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
VEF47998
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All DBs
Position
1:2098945..2099619
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AA seq
224 aa
AA seq
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MLNKQEVRFCIDTMGEMFPEAECELIHSNPFELVIAVLLSAQCTDVLVNKVTESLFKKYK
TPEDYLKVPLEELQQDIRSIGLFRNKAKNIQKLCYLLLENYGGEVPSDRDELVKLPGVGR
KTANVVVSVAFGVPAIAVDTHVERVSKRLAFCRWKDSVLEVEKALMRKIPEELWSVSHHR
IIFFGRYHCKAQNPQCEICPLLDLCREGKKRMKQKDKKVMQKNG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaacaagaagtcaggttttgcatcgatacaatgggggagatgtttccagaa
gctgaatgcgaattgattcattcgaatcccttcgaacttgttattgcggtattattatca
gcccagtgtactgatgtacttgtaaataaggtgacagaatcgctttttaaaaagtataaa
actccggaggattatttgaaagtgcctcttgaggagctccagcaagatattcggtcaatt
gggcttttccggaacaaagcaaagaacatccaaaaactatgctatttgcttttggagaat
tatggtggggaagtgccgtcggatcgtgatgagcttgtcaaacttcccggtgttggacga
aaaactgcaaacgttgttgtctccgttgcttttggtgttcctgctattgcagtggatacg
catgttgaaagggtcagtaaaaggctagctttttgccgttggaaagacagtgttttagaa
gtcgaaaaagcgctaatgcgaaaaattccagaagaactgtggtctgtcagccatcatagg
ataatcttttttggaagataccactgtaaagcccaaaatccgcaatgtgaaatttgtcca
ttgcttgatttatgcagggaagggaaaaagagaatgaaacaaaaggataagaaagtaatg
caaaaaaatggatga
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