Bacillus freudenreichii: NCTC4823_02126
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Entry
NCTC4823_02126 CDS
T06767
Symbol
yodJ
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd00550
Peptidoglycan biosynthesis
bfd01100
Metabolic pathways
bfd01502
Vancomycin resistance
bfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC4823_02126 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC4823_02126 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC4823_02126 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfd01002
]
NCTC4823_02126 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfd01011
]
NCTC4823_02126 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bfd01504
]
NCTC4823_02126 (yodJ)
Enzymes [BR:
bfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
NCTC4823_02126 (yodJ)
Peptidases and inhibitors [BR:
bfd01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
NCTC4823_02126 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
bfd01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
NCTC4823_02126 (yodJ)
Antimicrobial resistance genes [BR:
bfd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
NCTC4823_02126 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
LPAM_1
DUF1244
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
VEF48061
LinkDB
All DBs
Position
1:2160138..2160938
Genome browser
AA seq
266 aa
AA seq
DB search
MKKMTSIIVAGLLLAGCQWSQFQGENRQEQKPDSTSESSSIKEKSAERKNQKDSELILDA
AYFNEVNGKQEIMNASNTMALVNKTFALPSDYVPDDLIRPKVDFSFGNQDIEKSYLRKEA
ADALEKMFKAAKNEGILLYASSGYRSYDRQNGVFQAEVNKSGETKAAQAVAVPGTSEHQT
GLAMDITSESVQHLLVQEFENTSEGKWLKDNAHRFGYILRYPKGKEDVTGYQFEPWHFRY
VGEKAAKIIYERNWTLEEYFDNVAKI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgactagcatcatcgtggctgggctcttgcttgctggatgtcaatggagt
caattccagggagaaaacagacaggaacagaaaccggacagcacctcagagtcttcttct
ataaaggaaaaaagtgcggaaaggaaaaatcaaaaagattccgaacttattttagatgct
gcatattttaatgaagtaaatggtaaacaggaaattatgaatgcaagcaatacgatggca
ttagtgaataaaacatttgctttgcctagtgattatgtaccagatgatttgattcgtccg
aaagtggacttttcctttggaaatcaggatattgaaaaaagctacttaaggaaagaagct
gcagatgccttagaaaaaatgtttaaagcagcaaaaaatgaaggtattcttttgtatgct
tcttccggataccggtcttatgaccgtcaaaatggggtttttcaagcagaggtaaataaa
tcaggagagactaaggctgcccaggctgttgccgttcctggaacaagcgaacatcagaca
ggattggcaatggatataacaagtgagtctgtacaacatcttttagttcaggaattcgaa
aacacatctgagggcaaatggctaaaggacaatgcacatcgctttgggtatattctacga
tatccaaaaggcaaagaagatgtcactggatatcagtttgagccatggcacttcagatat
gtaggggaaaaagcagcaaaaatcatctatgagcgtaattggacacttgaggaatacttc
gataatgtagcaaaaatataa
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