Bacteroides finegoldii: BFINE_52190
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Entry
BFINE_52190 CDS
T09648
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bfin
Bacteroides finegoldii
Pathway
bfin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BFINE_52190 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfin03400
]
BFINE_52190 (nth)
Enzymes [BR:
bfin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BFINE_52190 (nth)
DNA repair and recombination proteins [BR:
bfin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BFINE_52190 (nth)
Prokaryotic type
BFINE_52190 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
IMS_HHH
TRAFD1-XIAF1_ZnF
DUF6063
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
BDW79424
LinkDB
All DBs
Position
4425218..4425895
Genome browser
AA seq
225 aa
AA seq
DB search
MRKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPTLYKDFP
TPEALAATTPEVVFEYIRSVSYPNNKAKHLVGMAKMLVNDFQSQVPDNLEDLTKLPGVGR
KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELIKNIPEELIPIAHH
WLILHGRYVCQARTPKCATCGLQMICKYFCNTYKVTKEESKAKNK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaaagaacgttatgagaaagtgatcgcctggtttcaggagaacgtgcctgtg
gccgaaacagaattgcattacaacaatccgtacgaactgctgatcgcagtaatcctctcc
gcccaatgcacggacaaacgggtaaatatgattactccgactttatataaagattttcca
actccggaggctttggcagccaccactcccgaagtcgtttttgaatatatccggagtgta
tcttatccgaacaacaaggcgaaacatctggtcggcatggcaaaaatgctggtgaatgac
ttccaaagccaagttcccgataatctggaagacttgacaaagctgcccggtgtgggcagg
aagacggccaacgtgattcagtccgtagtattcaataaagcggcaatggcggttgacaca
cacgtattccgggtaagccaccgcatcggattagtgccggacagttgcactactccgttt
agtgtggaaaaagaactgataaagaatattccggaagaactgatccctatcgcccatcat
tggctaatccttcacggtcgttatgtttgtcaggcacgtactcccaaatgtgctacctgt
ggtttgcaaatgatatgcaaatatttctgtaacacctataaagttacaaaagaggaatca
aaagccaagaataaataa
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