Bifidobacterium fermentum: QN062_03055
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Entry
QN062_03055 CDS
T10739
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
bfk Bifidobacterium fermentum
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bfk03051
]
QN062_03055 (dop)
Enzymes [BR:
bfk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
QN062_03055 (dop)
Proteasome [BR:
bfk03051
]
Prokaryotic proteasome
Bacterial regulatory particles
QN062_03055 (dop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
XDS51176
UniProt:
A0AB39UG62
LinkDB
All DBs
Position
complement(763503..765191)
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AA seq
562 aa
AA seq
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MSVLRLMGTETEYAVSDFEDTRSNPMQLPFDVVAGVADPSTQGIRWDYGEEDPTHDARGM
RLSRAAAPASMLTDAPQLHITNVIAPNGGRIYVDHAHPEYSAPETNDPFMAVRYDHAGDA
LMEQAAIRAGRRTGRQIQLHRNNVDGKGASWGTHENYQMLRSVPFAQVQGLMTAHFVTRQ
IYAGSGRVGIGERSETPGFQLSQRADYIHSRIGLQTTFERPIINTRDESHSTDEFRRLHV
IVGDANRMDVPQVLKLGTTSMLLWMLEMRMLRPELNRVEGHMPLDFVDPVEAMHIVSHDL
GLSARLALDGGEEITALEMQRRLLEAVERTGSDVYGRRGGDSSGIDWPDPSTERVMHMWR
EILSDLCKVRDAGDEERLGMRDEASRIEWLAKWQLLHALEIRIRHREHGRMPGTGVSNGA
SNGESAESWSDPRLRALDLAWSAVDSGKGLFARMQGRLERTVSDDELRQACAEPPQDTRA
WLRARLVRRFPTQIIGVAWARMTVRDDRGGDHAKTLRLDMRDSSKFGKSRCEAVLQRADS
AAEAVEMLAAEPFAADRDWRLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgttgcgcctcatgggcaccgagaccgaatatgcggtgagcgacttcgaggat
acccggagcaatcccatgcagctgcccttcgacgtcgtcgctggtgtcgcagacccatcg
actcaagggattcgttgggactatggggaagaggatccgacgcacgatgcccgtggcatg
cgtctgagcagagctgccgcaccggcaagcatgctgacggatgcgccgcagctgcatatc
acgaatgtgatcgctcccaacggtggccgaatctacgttgaccacgcccacccggaatat
tccgctccggagacgaacgaccccttcatggctgtccgatacgaccatgcaggcgacgca
ttgatggagcaggcggcgatcagggcaggtcgacgcaccggaaggcagattcagctgcat
cggaacaatgtggacggcaaaggtgcgagctggggaacccatgagaactatcagatgttg
cgcagcgttcccttcgcgcaggtccagggtctgatgaccgcacatttcgtcaccaggcag
atctatgcaggttccggccgcgtaggcattggcgagcggtccgaaaccccgggatttcaa
ctgagtcagcgtgcggattacattcacagtcgaatcggcctgcagacgacattcgagcgt
ccgatcatcaacacgcgcgatgaatcgcacagcacggacgaattcagacgcctgcatgtg
attgtcggcgatgccaaccgcatggatgtgccgcaggtccttaagctgggcaccaccagc
atgctgctgtggatgcttgagatgcgaatgctcaggccagagcttaaccgcgtggaaggt
catatgcctctcgacttcgtcgaccccgtggaggccatgcacattgtctcgcacgatctg
gggctttctgcaaggctcgctcttgatggcggggaagagatcactgcgctggagatgcag
cgtcgtctgctggaagccgttgagcggaccggatccgatgtatacggcagacgtggcgga
gattcttccgggattgactggccggatccatcgacggaacgcgtcatgcatatgtggagg
gagattctttcggacctgtgcaaggtaagggatgcgggtgacgaagagcgtctcggaatg
cgagatgaagcgtctcgaatcgagtggctggcgaaatggcagctcctgcatgcgcttgag
attcgcatccgtcatagggagcatggccggatgcctggaaccggcgtatccaatggcgca
tccaatggcgaatctgcggagtcatggtcagatccgagactccgcgcactcgatcttgca
tggtcggccgtcgattccgggaagggactgttcgcaaggatgcaaggtcgcctcgaacgc
acggtcagcgacgatgagttgcggcaagcctgcgcggaaccgccgcaggacacccgagca
tggttgcgtgctcggcttgtcagacgctttccgactcagatcatcggcgtcgcctgggca
aggatgaccgtccgtgatgacaggggcggcgaccatgccaagacgctgaggctggatatg
cgcgattcctcgaagttcggcaagtctcgttgcgaggctgtgctgcagcgagccgacagt
gcggccgaggcagtcgaaatgctcgcggccgaaccgttcgcggccgatcgtgactggcga
cttcgctga
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