Branchiostoma floridae (Florida lancelet): 118406540
Help
Entry
118406540 CDS
T01074
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118406540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118406540
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118406540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_1st
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_4th
Ig_NUP210_6th
NUP210_Ig
Big_2
Ig_NUP210_14th
Ig_NUP210_16th
Ig_NUP210_8th
Motif
Other DBs
NCBI-GeneID:
118406540
NCBI-ProteinID:
XP_035662496
UniProt:
A0A9J7K9Y0
LinkDB
All DBs
Position
19:17060656..17093273
Genome browser
AA seq
1720 aa
AA seq
DB search
MAALYKSLWLIILQISLSFASKLNAPKVLLPYYSTVATNFTLEASDGCFTWRSTRPEVAT
VQIVPVHHGKECSNKAVVTAVSTQPNKLTSIILAEEQETGQMLRCDVIVDRIHSITVETT
TRELYLEDSPESFEIKALDDELNTFSSLEGEEFDWTLVNDPESDVPAATILRILRFADTS
YAAPPDVLTLESAGKQGNVALVEGIKTGSAKVNIKLKDPIYKDVSPAEVQLVVIDNLLLN
PSYDVYLVQGQRIKYRVERFRQGKINEVAMPSTQYMFELQGGSYKIASLDRDTSTVTALA
MGTTTITLYDKNIKLQEAPHHPTAGIHVVEPGSLKFLIAPGKSNVLETGREYEVTIEVYS
KNPHKIYPSENLLIEGHFPTDFFEVLHSSKNGSYHVVRTVLKGFPDIKGTMKGIIKTNGE
ADLLPTPVEGSQSVEIYDPIQVLPPITVFPWEPSSRLTYQKMLKAIGGSGAFTWSSSAAA
VATINSKGVVTTATVGSTVVTASDVKNTAHTGKAKVYVLPPSDIQFLPSPVEAEIGTTLD
LPLALFADLSQNPRVLHHYDDCRLLKMEFKFSDKAVFQLVEGATAVESPVNTSCRAVQVK
ALTQGHTQLTASYRHASVNLQATVTIAAYNPLKPVDPEDIAVVAIGSSKDVVFQGGPLPW
VLDTSKYHPRALGEKNALVSIDHVPSYGGQKNLHIFRVLCKDLGDQTLTSTVANGPTAKN
QFPASARATVQFSCAVPTSLQLYPVLKYPQSDVPCPITPESGQQIPVHNYEYLDVDVVVT
DGNGRHFDNFSSLAIAWETSDQSLADFVSPTTSIREIHGQGKYTGHKVLTSMQTVVPKRK
RGSMTITGAIQGYNKHFFQYHGIKIATDLSPRISSSLDLLLVDDVKLAPDSVSIFNHPSN
KVQIVVSGGSGHFHVEPSDSRISQVFYNDKTRSIEVVPVDNGALTLTVHDLCLEMPRPAR
AVIYISGVEVIEVKMVDKVQLYNVIRADVRVLDSSGEPLAASVFPLMNLTPHPATGIISV
RPDPKLAADPYTVRYEVKGDALGHTTLSFQASAKSGETISSLPMNVQVFPPLKLSPRNIT
LIIGEVFQVVAIGGPQPLADIVYSIGNSDIATIDNSGLIEAVAVGDTVVTGVAQTEDPES
RATITCSQDQVFVYVVRLTGVKIHAPLNRIQTGAKMPLYVMGVNEHQTPFTFGHAIPGLT
FHWSLGNKDVIDLQPVYKENGVTLSEDDAYAMRVRALNQGQTNVGLRVKWSPRSYDQVEV
GATLTDTAHLHVFEKLRLMVPETDGSLLLMSPKSVGQIRTNRDGACKVVYELITCPEEGS
VVAVDSQGRVTAGSATGQANIKVTAMEESGLKQTIIVLVKVKPVSYITVNSETDVASVGN
KLSVIPVGMTITLRVSFHDNVGEEFHATSAVLKKRPNRFDLTQISRGPENGTFVLKAAHV
GHTILKVWDEGNPRIADYVPIPVGYAISPALATVSRGDIICLSTQLKLKEGSLAKWETSD
QRVVQVVGTTGLALATNPGTTTINYRLSTTQATHTEVTVVPVDEVQILTNGVKFVTNVPQ
QEPYLVPVVLGTGATNVQGNCSKDLLASMTEQQAFLQKSLFHCGLLFSSEVTEVSAREMF
LATPGFDPESGQYFCRVSQVQQNTHQVQAMSTVETSLQLQIFVQAADGQPEVSSSIASLR
FYPAFHLGKADLVLSNKQTRGEVTVSGVLDVLNNLQVCQQ
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactttacaaatctttgtggctgattattctccagatttcgctcagttttgcc
tcaaaactgaacgcaccgaaggttttactcccgtactattctacagtagctacgaacttt
acgttagaagcaagcgatggctgtttcacgtggaggtcaacgagaccagaggttgcaacc
gtccagattgtcccagtgcatcatgggaaggaatgttccaacaaggctgttgttacggcc
gtgtcgactcaacccaacaaacttacctctattatactagcagaggaacaggaaacggga
cagatgctgcggtgtgacgtcatcgtggacaggattcactccatcacagtggagaccacc
acgcgggaactttacctggaggattccccggagtcgtttgagatcaaggcgcttgatgac
gagctgaacacgttcagtagtctggaaggagaggaatttgattggacgttagttaacgat
cctgagtctgatgtacctgctgctactatcctcaggattctgaggtttgctgacacctcc
tacgccgccccgccagacgttctcacgctggagagtgccgggaagcaggggaacgtcgct
ctcgtagagggcattaaaactgggtctgccaaggtcaacatcaaactgaaggaccccatc
tacaaggatgtatcgccagcggaagtccaactggtcgtgattgacaacttacttctcaac
ccatcctacgacgtgtaccttgtacagggacagcgtatcaagtacagggtggaaagattc
agacagggaaagatcaatgaggtggccatgccttctacccagtacatgtttgagctacaa
ggtggaagttataagattgctagtctggacagggacacttccactgtgactgctcttgct
atgggcaccaccaccatcacactgtatgacaagaacatcaaattgcaggaagctccacat
cacccaacagctgggatccatgtggtggaaccaggctcgctcaaattcctgattgcgcct
ggtaagagtaacgtactggagacaggcagagagtatgaagtcaccatagaggtttacagc
aagaacccacataagatctacccttcagagaacttgctcatagaaggacattttccaacg
gacttctttgaggttctccactcgtccaagaacgggtcgtaccatgtggtgagaactgtc
ctaaaggggttcccagacatcaaggggaccatgaagggaatcatcaaaactaacggagaa
gcagacctcctccccaccccagtggagggcagccaatcagtggagatctacgaccccatc
caggtcctcccgccaatcactgtgttcccatgggaaccaagcagcaggctgacctatcag
aagatgctgaaggctattggagggagtggcgccttcacttggtcgtcgtcagccgcagct
gtcgccacgattaacagcaagggcgtggttaccacggcaactgtgggatctacggtcgtc
actgcttctgatgtcaagaacactgcccacactggaaaggcaaaggtgtacgtgttaccc
cccagtgatatacagttcctaccttcacctgtggaagctgagattggcacaacgctggac
ctgcctctggctctgtttgcagacctttctcaaaaccccagagtgctgcaccactatgat
gactgtagactactcaagatggaattcaagttcagcgacaaggcagtcttccaacttgta
gaaggtgcaacagctgtggaatctcctgtgaacaccagctgcagagcagtgcaggtgaag
gcactgacccagggccacacccagctcacagcttcatacagacatgcgtctgtcaaccta
caggcaacagttaccattgcagcatacaacccactaaaacctgtagacccagaggatata
gctgtggtggccattggttcatctaaagatgtggtgttccaagggggacctcttccctgg
gtgttggatacatccaaatatcaccccagagcactgggtgagaagaatgcactagtctct
atagaccatgttccttcttatggaggccagaaaaatcttcacatcttccgagtgttgtgt
aaagatcttggggatcagaccctaacctctacagttgcaaatggcccaaccgcaaagaac
cagtttccagcttcggcccgagcgacagtccagttctcgtgtgcggtccccacctcgctc
caactgtacccagttctcaaatatcctcagtcagatgtgccctgtcccatcactccagag
tcaggacagcagatcccagtgcacaactatgaatacctggatgtggatgttgttgtcacc
gacggcaacgggagacactttgacaacttctcctcattggccatcgcctgggaaaccagt
gaccaatcactggccgactttgtcagccccaccacctccataagagagattcatgggcaa
ggaaaatacactggacataaagttctcacgtccatgcagacagtcgtgccaaagagaaag
cgaggttccatgaccatcacgggagccatccaaggatacaacaagcacttcttccagtac
catgggatcaagatcgcaactgatctcagtcccaggatcagcagcagcctggatctccta
ttggtggatgacgtaaagttagcaccagattcggtgtccattttcaaccatccatccaac
aaggtccagattgtagtaagtggagggtctggccacttccatgtggagccaagcgacagc
agaatctctcaggtcttctacaacgacaaaaccagaagtattgaggttgttccagtagac
aacggtgctctgaccttgaccgtacatgacctctgtctggagatgccccgccctgcccgc
gctgtcatatacatctcaggtgtagaggtcatagaggtcaaaatggtggacaaggtacaa
ctctacaacgtgatccgtgcggatgttcgtgtcctggactctagcggagagcctcttgct
gcgtctgttttcccacttatgaacctcaccccacaccctgctacaggcatcatcagtgta
agaccggacccaaagcttgcagcggacccgtacacggtacgatatgaggtgaaaggtgac
gccctgggccacaccacgctctcgttccaggctagcgccaagtccggagaaaccatcagc
agtctgccaatgaatgtacaggttttccccccactgaaactgagccccagaaacatcacc
ctgatcataggagaggtgttccaggtagtggctataggagggcctcagccactggctgac
attgtctacagtattgggaacagtgacatcgctacaatagacaacagcggactgattgaa
gctgtggcagttggtgacaccgtcgtaacaggcgtggcacaaactgaagacccggagagc
cgtgcgaccattacgtgctcccaggaccaggtgtttgtatacgtggttcgactgaccggt
gtgaaaatacacgctcctctcaacaggatacaaactggggcaaagatgccactgtacgtg
atgggagtcaacgaacaccagacccccttcactttcggacacgccatccctggcctcacc
ttccactggtcgctaggcaacaaggacgtgatagacctccaacctgtgtacaaggagaat
ggtgtcacactatcagaagacgatgcatacgcgatgcgtgtccgagctctgaaccagggc
cagactaatgtcgggttacgagtgaagtggtcccctcgtagctacgaccaggtggaggtg
ggcgccaccctgacagacacggctcacttacacgtcttcgagaaactgcgactgatggta
ccggaaaccgacggcagcctccttttgatgagtcccaagtctgtcggacaaatcagaaca
aacagagacggtgcctgtaaggtggtgtatgagctcatcacctgtccagaggaagggtca
gtcgtggccgtagactcccagggcagagtgaccgctgggtccgccaccggtcaagccaac
atcaaggtcactgctatggaggagtccggactgaagcaaaccatcattgtcctggtcaag
gtgaagccagtgtcctacataacagtcaacagtgaaactgacgtggccagtgttgggaac
aaactgtccgtcattcccgtcggcatgacgatcaccctccgcgtcagtttccatgacaac
gttggtgaggagttccacgcaaccagcgctgtgttgaagaaaagacccaacaggtttgac
ttgacacagatctcccgaggcccagagaacggcacctttgtgttgaaggcagcacacgtg
ggtcacaccatacttaaggtgtgggacgaggggaaccccaggatagcagactacgtaccc
atccctgtaggctatgccatcagccccgcccttgcaactgtatccaggggtgacatcatc
tgtctgtcaactcagctcaagctgaaagaagggtccctggccaagtgggagacatcagac
cagagagtggtacaggtagtgggtaccacaggactggccctggccaccaaccctggtact
accaccatcaactacagactgtctacaacacaggctacacacacagaggtgacagttgtg
cctgtggatgaggtgcagatcctgaccaatggggtgaagtttgtgaccaacgtaccacag
caggagccgtacctggtaccagtggtactggggactggagccaccaatgtacaagggaac
tgtagcaaggacctgctggcttccatgacagagcagcaagccttcttacagaagtccctc
ttccactgtggcctgctgttctcatctgaagtgacagaggtctctgctagagagatgttc
ctggctactccagggtttgacccagaatcaggtcagtacttctgtcgcgtgagccaggtt
caacagaacacccaccaggttcaggccatgagcaccgtagaaacatctctccagctacag
atttttgtacaagctgcagatggccagccagaagttagctcgtcaatcgccagcctgaga
ttctatcctgccttccatctgggtaaggctgacctggtgctgagtaacaagcagacgcgc
ggagaggtcaccgtgtctggagtgttggacgtgctgaataacttacaggtttgtcagcag
taa
DBGET
integrated database retrieval system
