Branchiostoma floridae (Florida lancelet): 118406715
Help
Entry
118406715 CDS
T01074
Name
(RefSeq) sodium channel protein type 3 subunit alpha-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118406715
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118406715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
IQ_SCN5A_C
Zip
GPHH
Motif
Other DBs
NCBI-GeneID:
118406715
NCBI-ProteinID:
XP_035662875
UniProt:
A0A9J7HNN1
LinkDB
All DBs
Position
19:complement(1617203..1690166)
Genome browser
AA seq
2126 aa
AA seq
DB search
MPDKVVDLGGIWKALSPQTLKDIEARIKEEEKRKKERQEAGEEEEDEEVEELQPNKKLEA
GSALPDKYGEVPIELVGRPIEEIDDYYKTKWTFVVIAKDRTIFRFSTTNGCFLLSPFNPL
RRLALFTLTHSLFSTLVMLTILVNCVFMALNDPPKITEFIFNGIYTIEMLVKLSARGYAL
QHFTYLRDPWNWLDFAVVVLAYVTMFVDLGNLSVLRTFRVLRALKTISVVPGLKTIVNAL
IQSVINLRDVIILTSFGLCVFALVGLQLYMGQLRQKCVMEFPENGMNLAEFCYKFRDASQ
NALPNEYLHCADDLKMFNGNDEEIEQPRWVVNWVSWKDYFNYSTPRYKDIKGQITPEKKG
YCFPPPNDDPLFNETETVHDIMFEWIDDSDCNVSVVNATNNAAVWHAWYYNKDHWLMARG
LDGLCRNKSEDDPFCNPGFRCLRIGGNPDFGYTSFDNIGWALLTAFRLINQDYWENLYQQ
VLGTAGHANMLFFLLVIFLGSFYLVNLILAVVAMSYEEASQQTEDEEEEAMGAAGESGSG
SSSESDSESESSSANVAARRKRSGSRSSRSSSRSGSKCGSTCKVHPSCSIVSWTALNGAF
PSNSNFLSMQDIEMQPDGEVEAVQEKHTMEETEKEKSEKEIAVRKAGFVRDDEEYDSSDW
ETDDEEPPTPLQIAFNVLCGWKCPPCWNVIARISFLFICDPVMELFITLCIIFNTVFMAM
DYHDISQNKPFEKTLEVGNYVFSGIFAGEFFFKLIGMGPKDYFAVGWNMFDSFIVILSCI
EILMEQLMGGGLAGFSVLRSFRLLRVFKLAKSWPTLNKLLSIIGNSMGALGNLTFVLGIV
IYIFAVLGMQVFGECYRTWTPLLDRPRWNFEDFLRSFMIVFRVLCGEWIESMWDCMRCDI
VKFENCPGHENPEEKGVRYTCVPFFLLTVLIGNLIILNLFLALLLSSFSGLEESGDEGSG
EPNNIVIGVNKIIFFFKYIIYCFLPCFVPKPKKNWPPFDQEEEEDAEDEGGDDDEEWKIE
KTYVDGEVPTMDGEAVVLQNGYVGKRPSLAESGTPWSSQNGIPVAMCGFNSEMDIIDVTK
APRKKKESESNEKESENQYIPDGECIKDNKEMEESKDENKDGNRSSSTSNGLSKASTTPA
KSSSEPSLCQKENGVVPMMDKIGNGLGSIPDKLSDGVLSNGKLSEGMLDPAYTPTKLSDG
VLNMDEKPDGDLPDDPGSPGSKEKQSDYASSGVIVEYPPDCWPEKWAMPCCDECIKSPIG
IKFAALRVKAYWIIEHNYFETFIIIMIVLSSGALAFEDKYINTEEKIIVKTVLGYADYAF
TVIFTIEMVLKMLGYGFKTYFTNAWCWLDFIIVMASLVTAIPNLMGMGDSVPESLKTVRV
IRALRPLRAISRAEGMKVVVNALIGAIPSVTNVLMVCLVFWLIFAIMGVQLFKGKFFKCM
DEVNNPGEFKMKTCIIFNETFCNDPIAEVIPATCYDLNKNEKPACVLMEGPTDYCETQAI
CQECNNLYKTPTKIAELCEDFQEMCNITCPASYNVGYKVTEDVEDFLCYDENGGLKGPEM
YFNKSVCLARNKTWENYKINFDNVGIAYLSLLQIATFKGWIQIIEHAVDGTDVDLQPVRD
FGSMWYLYFVIFIIFGAFFTLNLFIGVIIDNFNAQKKKPGDGDGSSADLFMTEDQKKYME
QMKKLGSKSPSKGIPRPDNNFQGFFYDVAMTQAFEVVIMAFIMFNMLTMMMEHEGSSQKF
KDILEKINLVFIAVFTGEMVWKMIAFGPKYFSQGWNIFDFVVVVMSIITQGLEDVMAALP
VPPTLLRVIRVARVGRILRLVKGAKGIRTLIFSLLVSLPALVNIGLLLFLIMFIYAIFGM
MNFAHCKRMQGLNEVINFETFFNSIILLFQVCTSAGWDGILNGLQDQLIPTINGTTPTKE
QIDAGILDDIDKCWSLSRYTYLGIFFFVSYLIMNFLIVVNMYIAVILDNFSAATEEAAGG
GVTEDDIDMYYSLWERYDPHASKYISLSKISQFVHQLDDPLRIAKPNKITLAYLDIPICT
GDRLYCKDILKRLTERAMGTFDNDKEAVDEEEEEAVTTDHPEDYQRIGSTLTRRREEVAA
MVIQRAIRKYVLKHDFDKEQAPQIIF
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaaggtggtggacttgggtggcatttggaaagccttgtctccgcagactctg
aaagatatagaggcgcggatcaaagaggaagagaaaaggaagaaggaacgccaggaagcg
ggggaggaggaggaggatgaagaagtggaagaactacagcccaacaaaaaactggaggct
ggatcagcccttcctgataagtatggggaagttcctattgaactggttggaagacctata
gaagaaatcgacgattactacaagaccaaatggacgttcgtggtgatcgccaaggacagg
actatcttccgtttcagcacaacgaacggatgcttcctcctgtcacccttcaacccgctg
cgccgcctggcactcttcacgctcacacattcattattcagcaccttagtcatgctgacc
atcctcgtcaactgcgttttcatggcgctgaacgatccgccgaagatcacagaattcata
ttcaacggcatttacacaatagaaatgctggtgaagctctcagccagggggtatgccctc
caacacttcacatacttgagggacccgtggaactggctggatttcgctgttgtcgtgctt
gcatacgtcacaatgttcgtagacttgggcaacctctccgttttgagaacatttcgagtg
cttagggctttgaagacaatatcagtggtgcctggtttaaaaaccatcgttaacgcctta
attcagtctgtcatcaacctccgtgatgtcatcattctgacatcctttggcctgtgtgtg
tttgccttagttgggttgcagttgtacatgggtcagctacgacaaaagtgtgtcatggag
ttcccagaaaatggaatgaacttggcagagttctgctacaaattccgcgatgctagccaa
aatgcgttgccaaatgaatacttgcattgtgcagatgacttgaaaatgtttaatggcaac
gatgaagaaattgagcaacctcgttgggtggtaaattgggtgagctggaaagactacttt
aattattccacaccacgttacaaggacatcaaaggacagattacaccagaaaagaaggga
tactgcttcccaccccccaatgatgacccattattcaacgagacggagacggttcacgac
atcatgtttgaatggatagatgacagtgactgcaatgttagcgtagtgaatgcaaccaac
aacgcagctgtctggcatgcctggtattataataaagaccattggttgatggctcgtggc
ttagacgggctttgcaggaacaagtcagaagatgacccgttttgtaatccaggattcagg
tgtcttcggattggagggaatccagattttgggtacacaagctttgataacatcggctgg
gccctgctgactgccttccgtcttatcaaccaagactactgggagaacctctatcaacag
gtccttgggacagctgggcatgccaatatgcttttcttcctattggtcatcttcttaggc
tccttctaccttgtcaacttgattcttgctgttgttgccatgtcttatgaagaggcatca
caacagacggaggatgaggaggaggaagctatgggagcagcaggagaaagtggcagtgga
agcagctcggagtcagatagtgagagtgaaagcagctccgctaacgttgcagcgcggaga
aaacgtagtggcagtagaagtagtcgaagcagcagtcgaagtggcagtaaatgtggaagc
acctgcaaggtgcacccttcgtgcagcattgtgtcctggacagccttgaatggagcattc
ccctccaactccaacttcctgtccatgcaagacatagagatgcagccggatggagaggtg
gaagcagttcaagaaaaacacacaatggaggagactgagaaagaaaaatcagaaaaggaa
attgcagtgaggaaggctggttttgtccgtgatgatgaagaatacgattcatcggactgg
gagactgatgatgaagaaccacctactccattacaaatagcttttaatgtgctgtgtggc
tggaagtgcccgccatgttggaacgtcatcgccagaatcagtttcctgttcatctgtgac
cctgtcatggagctcttcatcacgctgtgtattatattcaacacagtcttcatggccatg
gactatcacgacatctcgcaaaacaaaccgtttgaaaagaccctggaagttggcaattat
gttttcagtggaatctttgcaggggaattttttttcaagttgattggtatggggccaaaa
gattactttgcagtgggctggaatatgtttgactccttcatcgtgattctcagttgtatt
gagatcttgatggagcagttgatgggtggcggtctagcaggattctcagttcttcgatca
tttcgattgctccgtgtcttcaagttagccaagtcctggcccacgctgaacaagttgctg
tccatcattgggaattccatgggcgcccttgggaacttgacctttgtcctgggcatcgtc
atctacatctttgctgtgcttggcatgcaggtgtttggcgaatgctacaggacatggaca
ccgctcttggataggcctcgttggaactttgaggacttccttcgtagcttcatgattgtg
ttccgcgtcctgtgtggagagtggatagaatccatgtgggactgcatgcgctgcgacata
gtcaagtttgagaattgtcctggtcatgaaaatccagaggaaaaaggtgtcagatatacc
tgtgtccccttcttccttctgacagttctcatcggcaacctaattattttgaacctgttc
cttgctttgctcctcagttcatttagtgggttggaagagtctggagatgaaggcagcgga
gaacccaacaacattgtgatcggcgtgaacaagatcatttttttctttaagtacatcata
tattgtttcctaccttgctttgtaccaaaaccaaagaaaaactggccaccatttgaccag
gaggaggaggaagatgctgaagatgaaggtggagatgatgacgaggagtggaagattgag
aagacttatgtggatggggaggtcccaaccatggatggcgaggcagttgtgctccaaaat
ggttatgttgggaaacggccatccttggcagagtccggtacaccatggagctctcagaat
gggatacctgtagccatgtgtggcttcaactccgaaatggacatcatcgacgtcaccaag
gctcctaggaagaaaaaggaatcagagagcaatgaaaaagagtcagaaaaccagtacatt
ccagatggtgaatgcataaaggataataaggaaatggaagaatcaaaagatgagaataag
gatggcaatcggtcatcgtccacctctaatgggctcagcaaagcaagtactaccccagct
aaaagttccagtgagccatccttgtgccagaaagaaaatggtgtggtcccaatgatggat
aagataggaaatggactcggttcaatacctgataaattatctgacggtgtgttgtccaat
ggtaagctatctgagggtatgcttgaccctgcgtacactcccaccaaactgtctgatggt
gtgttgaacatggatgagaagccagatggcgacctccctgacgacccaggctccccaggc
tcgaaggagaagcagagcgactatgcaagttctggtgtgattgtagaatatccaccagac
tgctggccagaaaagtgggctatgccatgttgtgatgagtgcatcaagtcaccaatcggc
atcaagtttgctgctctgagagtcaaggcttactggatcattgaacacaattactttgag
accttcattatcataatgatcgtcttgagcagtggagcactggcttttgaagacaaatac
atcaacaccgaggaaaagattatcgtcaaaactgtccttggatatgcggactatgccttc
acggtcatatttaccattgaaatggttctcaaaatgcttggctatgggtttaaaacatac
ttcaccaatgcctggtgctggctggatttcatcattgtcatggcttccctggtcactgcc
atccccaacctgatgggcatgggagactccgtaccggaaagcctgaagacagtgcgggtc
atacgtgcactccgacccctgcgagctatctccagggcagagggcatgaaggttgttgtc
aacgctttaattggtgcgatcccttctgtgacaaacgtattgatggtatgcttagtgttc
tggctgatttttgccatcatgggcgtccagctgttcaaaggaaagttcttcaagtgtatg
gacgaagtcaacaacccgggagagttcaaaatgaagacgtgcatcattttcaacgagacc
ttctgtaacgaccctatcgctgaggtcatcccggccacctgttatgatttgaataaaaat
gagaagcctgcctgcgtgttgatggaagggcccaccgactattgcgagacacaagccata
tgccaagagtgcaacaacttgtacaaaacacctacaaagatagcagaactgtgtgaagat
tttcaggaaatgtgcaatattacctgcccagcatcgtacaatgtaggttacaaagttact
gaagacgtggaggactttctatgctatgatgaaaatggaggtttaaaaggaccagagatg
tatttcaacaagagcgtgtgtctagctaggaacaaaacctgggaaaattacaagataaac
tttgacaacgttggaattgcttacttatcactactacaaatagcaacatttaaaggatgg
attcaaatcatagagcatgcagtagatggtaccgatgtggatctacagcccgtgcgtgac
tttggcagcatgtggtacctgtattttgtcattttcatcatctttggagcttttttcacc
ctgaacctgttcattggtgtcatcattgacaatttcaacgcccagaagaaaaagccagga
gacggagatgggtccagtgcagacctgttcatgactgaagaccagaagaagtacatggaa
cagatgaagaaacttggctccaaatccccatcaaagggtattcccagaccagataacaac
tttcaaggattcttctatgatgtcgccatgacgcaagcatttgaagtggtgatcatggcg
ttcatcatgtttaatatgctcaccatgatgatggagcatgaaggatcaagtcagaagttt
aaggatatcctggaaaaaatcaacttagtcttcattgccgtctttaccggcgagatggtg
tggaaaatgatagccttcgggccaaaatacttctcacaaggctggaacatctttgacttt
gtggttgtggtgatgtctattatcacccagggactggaggatgtgatggcggccctaccc
gtaccccccactctgcttcgagtcatccgtgttgccagagttggccgtatcttaagatta
gtcaagggggccaagggtattcggaccctcatcttttcccttctggtgtctctgccagct
ttagtcaacattggcctcttactgttccttatcatgttcatctacgcgatctttggaatg
atgaactttgcccattgtaaaagaatgcagggtctcaacgaagtcataaactttgagacc
ttctttaacagcatcattctgctgtttcaagtctgcacctctgccggttgggatggcatc
ctaaacggtttacaggatcaattaattcccacgatcaacggtacaacaccaacaaaggaa
caaattgatgcgggaatactcgatgatattgacaagtgctggagcttatccagatacact
tacttgggaatattcttttttgtttcatacctaataatgaatttcctgatcgtcgtcaac
atgtatattgcggtgatcttggacaatttcagcgccgctacggaggaagccgcagggggt
ggcgtcacagaagatgatatcgacatgtactattctctttgggagaggtacgatcctcat
gccagcaagtacatctctttgtcaaaaatatcgcagttcgtccaccagttggatgatcca
cttcgcatagccaagcccaacaagatcactctggcctacctggacatccccatctgtaca
ggtgatcggctctactgcaaggacatcttgaagaggctgacagagagggccatgggcacg
tttgataatgacaaggaggcggtagatgaggaggaggaggaagctgtgaccacagaccac
cctgaagattaccagcggatcggctccactctcacgaggaggcgtgaggaggtggccgcc
atggtgatacagcgtgctatccgtaagtatgtgctgaaacatgatttcgacaaggagcag
gcgccgcagatcattttctga
DBGET
integrated database retrieval system
