Branchiostoma floridae (Florida lancelet): 118406716
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Entry
118406716 CDS
T01074
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118406716
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118406716
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
GPHH
ATP-synt_B
UPF0239
Motif
Other DBs
NCBI-GeneID:
118406716
NCBI-ProteinID:
XP_035662883
UniProt:
A0A9J7HNZ5
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Position
19:complement(1705308..1776571)
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AA seq
1747 aa
AA seq
DB search
MEKEITPNRNFRPLTNDSVKEIQRLIDEKKERLRKIKEGEIDEDEIEEHEIEDPDPKLSV
GCVLPDYLGEFPDDYVGRPLEDIDPYYADKETFIVIAKDRSIFRFSTTSACYIFTPFHPI
RRLALYTLVHSLFSTLVMLTILVNCVFMTMTNPPEITEYIFTGIYTFEMTVKLLARGFAL
THFSYLRDPWNWLDFGVIGLAYITIFVDLGNLSALRTFRVLRALKTISVVPGLKTLVSAL
IQSVINLRDVLILTVFALCVFALVALQIYMGQLRQKCIRIIPEFMNISEYLSFWPNSTLP
DEYWDNYTSWSGLGDDFLVTVPNITDQMWFLWNNNTENFQIGDISEYKVCGNSSGGGICA
EGFRCLPGFGPNPNYGYTNFDSFGWAALASFRLIVQDYWENLYQLILAVAGPVHIMFFIV
VIFLGSFYLVNLILAVVAMSYEDASSETAEEEAEAAAKAAAEAEAETASEAQKSLERASK
KTASAAGDIEKGAGAVDYDSDDEEEETIAQKLDRIFCSWSCPPVWNKFANLCFLFICDPV
MELFITLCIVLNTLFMAMDYHGKSEHMTYVLQQGNYAFTGIFAGEMVLKMIALGLKQYFT
VGWNIFDSIIVTLSLVELGLEGVKGLSVLRSFRLLRVFKLAKSWPTLNLLISIIGNSLGA
LGNLTFILGIVVYIFAVIGMQLFGEYYTAEAFGGTLPRWHFQDFFHGFMIIFRVLCGEWV
ETMWDCMHCAGSAYPACLIMFLLTMVIGNLVILNLFLALLLSSFSGDNIGESGSDEPNNL
QIAIDKIKWFPKFLLSLCLPCVPTPKKNWPPYTDQGKEEEEEESGIHMIDGQAVIMQNGS
VSKLEDPDKWSASNGVVVPIAGFDSELDITGMSPSQKKLNYDEMGEKKGSNYSLSSGSVT
SGSLETLSEKEKGTLEAESTKSHSETTLTGEGKGGEGEEEEPPTKCWEDLEENAPDCLCE
GCYKKIAFCANVDETGWGPTWNAIRARAHWIIEHKWFETFIIAMIMFSSLALAIEDRHIR
QRPTLKKILEYADLYFTFIFFIEMLFKWLGYGYKKYFTNAWCWLDFIIVMVSLVSLVAKI
MGMENVSAFKSLRTLRALRPLRAISRAEGMRVVVNALICAIPSIGNVLLVCLIFWLIFAI
MGVQLFGGKYYKCVDDEGNKVNASYVRDEFECGQKNLSWINAPINFDHVGQAYLSLFQVA
TFKGWMDIMYDAIDSTDVGLQPEYEINLFMYLYFVLFIIFGSFFTLNLFIGVIIENFNAQ
KKKGGEGSSIDLFMTEDQKKYYAAMKKLGSKSPTKGIPRPANKVQAFFYDVAMHQIFEIF
IMIIIGLNMVSMMIEHYGQTQEFTDNLALVNIVFIGIFTWEMVWKMTAFGFKYFSQGWNI
FDCVVVVMSILGILLEDIIEKYFVSPTLLRVIRVARIGRILRLIKGAKGIRTLIFSLAIS
APALFNIGLLLFLVMFIYAIFGMISFMDVIRNKGLTEITNFETFGNSIISLFEVCTSAGW
DGLLAGVMVEPPDCDPEPSEDYPNGNCGNSSLAIFFFLSYLVLNFLVMSNMYIAVILDNF
SNAVAEADEGGVTEDDVDMYYSLWERYDPHATKYIHLDQVSKFLHELDAPLRVPKPNKVT
IVYLDLPICTEDRVYCRDLLTKLTDKVMDTLHQEKTEEELAEALADPERPEDYEVISSTM
ARRREELAAMAVQRAFRRWMLKASIERAPEFLKREDDDEDITSMKSTDDMKDEGSPKADK
SRRASLT
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggagataacgccaaaccgaaactttcgtcctctgaccaacgattctgtgaag
gagatacagcggctgatagacgagaaaaaggagcgacttcggaagatcaaggaaggagaa
atagacgaagatgaaatcgaagaacatgagattgaggaccccgatccgaagctgtcggtg
ggatgtgtccttcccgactacctcggggagtttcccgatgattacgtgggtcgaccttta
gaggacattgacccgtattatgcagataaagagacgtttatcgtgatagcaaaggacagg
agcatattccgtttcagcaccactagtgcctgctatatcttcactcctttccatcccatc
cgacgactagcactctacacactagtgcactcattgtttagcacgttggtcatgctcaca
atcttagtgaattgcgtgtttatgactatgacaaatccaccggaaatcacagagtatata
ttcaccggcatctacacttttgagatgacagtaaagttattggctagagggttcgctctt
acacatttctcttacctgagggatccatggaattggctagactttggagttatcggatta
gcatacattaccatattcgtagatctggggaatttgtcagctctgagaacctttcgagtt
ctgcgagcattgaagactatctcagtagtcccaggtctgaagactctggtcagcgctttg
atccagtccgttatcaacctccgagacgtcctgatcctgaccgtcttcgctctctgtgtg
ttcgccttagtcgctctccaaatctacatgggacagcttcgccaaaagtgcattagaatt
attcccgaattcatgaacatttccgaatacctttctttttggcccaactcaactttacct
gacgagtattgggacaattatacaagttggtcaggattgggggacgactttttggtcacc
gttccaaatatcacagatcagatgtggtttctttggaacaataatacagaaaactttcaa
ataggagacatctcagaatataaagtttgcggcaacagcagcggtggaggaatatgtgct
gaaggctttaggtgcctgccagggtttggccccaaccccaactatggttacaccaatttt
gactcatttggctgggccgcactggcatccttcagactcatcgtacaggactactgggaa
aatctttatcagttgatattggcggtggcaggcccagtgcatataatgttctttatcgta
gttatattcttgggatcattctacttggtcaaccttatcttagctgttgtggcgatgtct
tatgaagacgcttcatcggaaacagcagaggaagaagcagaagctgcagcgaaagctgcg
gctgaggcagaggcagaaacagcgtcagaggctcagaaaagcttagaacgagcatcaaag
aagacggcctcggctgccggtgatatagagaagggagcaggagcagtggactatgattcg
gatgatgaagaggaggagacgattgctcagaagctggacaggatattctgcagctggtcc
tgccctccagtgtggaacaaattcgctaacctgtgttttcttttcatctgtgatcccgtc
atggaactgttcattaccctttgcatcgttctcaacactctcttcatggccatggactac
cacggcaaatccgaacatatgacttacgttctccagcaggggaactacgcttttaccggc
attttcgctggtgagatggtattgaagatgatagctctgggtctgaagcagtacttcact
gtgggctggaacatctttgactccattattgtgacgctaagtctcgtggagcttggactg
gagggcgtgaaaggcttgtcagtactccggtctttccgtttgcttcgagtcttcaagctg
gccaagtcctggccaacgctgaatcttctcatctccatcatcgggaactcgctgggcgct
ctgggcaacttgacgttcatccttggcattgtggtgtacatcttcgccgtcatcggcatg
cagctattcggggagtattacacagccgaggcgttcggtggcacattgcccaggtggcac
ttccaagacttctttcatggcttcatgatcatcttccgagttctgtgcggcgagtgggtg
gagactatgtgggactgtatgcactgtgccggctccgcgtacccagcctgtctcatcatg
ttcctcctcaccatggtcattggcaatcttgttatcctcaacctcttccttgccctgctt
ttgagttcctttagtggggataatataggagaatcgggatcggatgagcccaacaaccta
cagattgccatcgacaaaataaaatggtttcccaagtttcttctgtcgctgtgcttaccc
tgtgtccccacgcccaagaagaattggccaccgtacactgaccaaggtaaagaggaggag
gaggaggaaagtggcatacacatgatcgacggacaagcagttatcatgcagaacggttcg
gtcagtaagttggaggatccggacaaatggagcgcgtccaacggcgtcgtggttcccatc
gccggctttgactccgaactggacatcacgggaatgagcccgtcccagaagaagctgaac
tatgatgagatgggtgagaaaaaaggcagtaactactccttatcctcggggagtgtgacg
tccgggagtctggagacattgagtgagaaggaaaaggggacgttggaagccgagagcact
aagtctcactccgagaccactctgactggggaggggaagggaggagagggggaggaagag
gagccccctacaaagtgctgggaagatctggaggagaacgctcccgattgtttatgtgaa
ggttgctacaaaaaaattgctttttgtgcgaatgtcgatgaaaccggatggggacccacg
tggaacgccattcgggcgcgtgcgcactggattattgaacacaagtggttcgagactttc
atcatagcgatgattatgttcagtagcttggctctggcgatagaggatagacatatccgc
caacgcccgaccttaaagaagattcttgaatatgcggatctttactttacgtttattttc
ttcatcgaaatgttattcaagtggcttggatacggctataagaagtacttcacgaatgcc
tggtgctggctggacttcattattgttatggtgtcactggttagtttggtggccaaaatc
atgggcatggaaaacgtctccgccttcaaatccctccgaacacttcgagcacttcgacct
ttacgagctatatctcgagcagagggaatgagggtcgtcgttaacgctttgatttgcgcc
atcccctccatcgggaatgtgctactggtgtgcctcatcttctggctcatatttgccatt
atgggagtacaactcttcggagggaaatactacaaatgcgttgatgatgaagggaacaag
gtgaacgccagctacgtcagggatgagtttgaatgtggccagaaaaatctgtcctggatc
aacgcgccgatcaactttgaccacgttggacaggcatatctttcactgtttcaagtggca
acttttaaaggctggatggacattatgtatgacgccattgacagtacggatgtgggcttg
caacccgaatatgagataaatctcttcatgtacctgtacttcgtcctcttcatcatcttt
ggttccttcttcactctcaacctcttcattggtgtcatcattgaaaatttcaacgcacag
aagaaaaagggtggagaaggatcctctattgacttgtttatgactgaggatcagaagaag
tactacgctgccatgaaaaaactgggttccaagtccccaaccaagggaatcccgaggcct
gcgaataaagtccaggcatttttctacgatgtagccatgcatcagatattcgagatcttt
atcatgattatcatcggcctgaacatggtgtccatgatgatcgaacactatggccagacg
caagagttcaccgacaacctggccttggtcaacatcgtgtttatcggcatcttcacatgg
gagatggtatggaagatgactgcctttggctttaaatacttcagccaaggctggaacatc
tttgactgcgttgtcgtcgttatgtccatattaggaattctgttggaggacatcatcgaa
aaatatttcgtctcccctacattactaagggtcatccgtgtggcaaggattggccgaatc
cttcggctcattaaaggagccaaaggcatccgtactctgatattttctttagccatatct
gcaccggctctgtttaacataggactgctgctcttcctcgtcatgttcatttatgccatt
ttcggaatgatttccttcatggatgtgattcgtaataaaggcttgactgagatcaccaac
tttgaaacgttcggtaacagcatcatatcgctgtttgaagtctgcacctctgccggctgg
gacggtcttcttgccggtgttatggtggagccgcccgactgtgacccggagccttccgag
gattatccaaacggaaactgtgggaacagttccctggccatcttcttcttcttgtcttat
ttagtcctgaacttccttgttatgtccaacatgtacattgctgttattctggacaacttc
agtaacgccgtggcagaagccgatgaaggaggcgtcacggaagatgacgttgacatgtac
tattcactttgggagcgctacgacccgcacgctaccaaatacatccatttggaccaggtg
tcgaaatttctacatgaacttgacgcccctcttagagtgcccaaaccaaataaagtcact
atagtctacctggacctgccaatatgcacggaggatagggtatattgtagagaccttttg
acaaaactgacggataaggtgatggacacgcttcaccaagagaagacggaagaagagctg
gctgaggcgttagctgatccggaaagacccgaggactatgaggtgatcagctccaccatg
gcgagaaggcgcgaagagctcgctgctatggccgtccagagggcctttaggaggtggatg
ttgaaagcttccatcgaaagggctccggagtttttgaaaagggaagatgacgatgaagac
ataacaagtatgaaaagtacagatgacatgaaggacgaaggatcgccgaaggctgataaa
tctcgcagggcttctctaacatag
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integrated database retrieval system
