Branchiostoma floridae (Florida lancelet): 118409810
Help
Entry
118409810 CDS
T01074
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409810
Membrane trafficking [BR:
bfo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118409810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
118409810
NCBI-ProteinID:
XP_035667023
UniProt:
A0A9J7KN10
LinkDB
All DBs
Position
2:7142856..7383611
Genome browser
AA seq
2104 aa
AA seq
DB search
MALLLHLICVGPFRGRGDRVAKVTFRGVAHYTKILEGVEEDAYFDETFEWPVASPIEGNE
YVEVQVYNYSKVFSNRLIGTFRMVLQKLIQEGQLSITETLLDANNTVINTEVDLELKYQA
PDGTVGNWMREEFHFPQEDDDTVSLLSGNSRFSSSSKGVKGIFGGKKGSVSKHGRSSRGV
DSVSQYGSRMSLGSEEIHIRDGGGGSQDNVSMTSVNQNVTNKKSKPTPVIETGSQKAQDF
QICITIIEARQLAGLNMDPVVSVQIGEERKFTSQKESTNCPYYNEYFVFDFHMSPDMLFD
KIITLSVLHSRNLLRSGTMVGSFKLDVGTVYDAPDHQFYHKWALLTDPEDVTGGPKGYLK
CDIAVVGKGDSIKTPPKSSEDDEDDIEANLLLPEGVPAERQRAKFIVKIFRADGLPKMST
GLMANVKKAFTSETRDLVDPFVQVEFAGQRDGRTSVKKGSYQPEWNEQIVFCEMFPPLCR
RFKIQLRDHDSVNNEVIGTHFLDLNMVSDDGDKGFLPTFGPTFINLYGSTRDYSLMDEHQ
ALNEGVGEGVAFRARLLIQLKCEMCTDETEGVSNEVQVESCSALSDTAAGRIDEFFLFGS
FLEATMIDRKIGDKPITFELSIGNYGNNVDGQNASTAPKGGDGGDSSEEEDEEDGSSANS
VTPAIKPVTNDRFLSTLQLRRLDRYYYHMPFYEEKPCVYIKSRWEDHRRRLYNQNMLAKV
IEKGEEGMSDVQEMITMERPHPERRLRGVLEELSVGCNRFCSLLQKASGKDGNSAGRTKL
DKERARTLLREVEIIGKEAKKMKATVRASTYKDKLKQTQSFVNKLKVLNIEPQDSLPDIF
IWMLSNNKRIAYTRFPSRDILYSIVAEETGVNCGKVQTLFLKLPGKRGTGPSGWTIQAKL
QLYLWLGLNKHKKDFLGGLPKGYEQTKAIQSAGRLQSVPPVTLKYEERQTFQLRAHMYQA
RSLVASDASGLSDPFARVVFSTRSMKTEVISETLAPTWDQLLVFDDLTLFGNPKSMAEEP
PTIVIEIFDQDTVGKSEFIGRALAKPTIKMANERYTLPKFPPTLDWYPIFRGQEQAGELL
AAFELIQMPIHEEEILQALYEQWDDKSKSEFPRGAKLPPVTQPLESDRGPIVPVPRGIRP
VVSKHRIEILFWGVRELKRLQLTSVDRPRVDIECAGQIIQSTVIANAKKNPNFSIPVKFF
DVDLPENELFMPPLTIRCVDCRTFGRFTLVGTHVVNSLHKFMYKPSPETPEGSIANGTLP
IDDGRSFHGSIHGDTRSVRSVRADDVAVKIDTMSHVSHSSQHKEETVIKIDPVSTHMNGE
AKTEVYKDLSMNASQLAPESSEGDNKEKEGEGGEEGGEMKKKKKGGKEEEQEEEETDEST
LDWWSKYFASLETLREWQEQQEAIDKKEELEAEKEDSQTDGKIIDKGKFLSTTATKTVKY
RGEPEEKDKKKKKKDKKKDKKKDKDKDKDKDDNKAGEEGKSKLAKLSPKTSRKKDKSSGV
TELKRNIYEGIEQLKIYPCPLEDVDDFNGFHEWLHTFELLRGKKEEGDDDSRIVGKFKGC
LQVYKPKEGDDGTGSVIGGGEMINPTGMFAHIPNNDPVGVLVRVYIVKAIDLHPADVNGK
ADPYLKLSLGKHQVNDKENYVSKQLNPVFGKSFDFEATFPMESMLCVQIFDWDLVGIDDL
IGETKIDLENRYYSRHRATCGVSSFYAIHGYNAWRDPQKPTEILKKLCKDGKVDGPHFSP
GKVRVGGRVFEGAKEVEDENGGKRPSDEPSALVALNQWHEIAKAGCALVPEHVETRPLYN
PEKPGIEQGKVEMWVDMFPMDMPPPGPPTDISPRKPKSYELRVIIWNTDDVIAEDDDFFT
GEKMSDIYVKGWVKGNTEDKQETDIHYRSLTGEGNFNWRFIYPFEYLAAEEKIVISRKES
LFSWDETEYKIPARLNLQVWDADHFSADDFLGSLVMDLNHFPRGAKTSKQCTLDMLKTDG
SVPQVNLFKQKRVKGWWPFAAKGEDDELELTGKVEAELNLMSAEEAEKSPAGLGRNEPDP
LEKPKRPDSSFMWFLNPLKSLRYILWKNYKWTIIKIVCVLLLAAFIGVLLYSMPGYMVKK
ILGA
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcttcttcacctcatctgcgtgggtccgttccgcggccggggagaccgggtc
gccaaagtcacctttcggggtgttgctcactacacaaagatcctggagggagtggaggaa
gatgcctatttcgatgaaacatttgaatggccggttgccagccccatcgagggcaacgag
tacgtggaagtccaggtctacaactacagcaaggtgttcagcaacagacttatcggcacc
tttcgcatggtgctccagaaactgatacaagaaggacagctgtcaatcacagaaacactg
ctggacgcaaacaacaccgtcataaatactgaagttgacctggagctgaagtaccaggcc
cccgatggcacggtcggcaactggatgcgagaggaattccacttccctcaggaagatgac
gacacggtctctctactcagcgggaactcccgattcagcagcagctccaaaggggtgaag
ggaatctttggagggaagaagggcagtgtgtccaaacatggccgatcctcacgaggggtg
gactccgtgtcacagtatggctcacgcatgagtctaggctcagaagagatccacatccga
gatgggggcggtggatctcaagacaacgtgtctatgacgagtgtcaaccagaacgtcacc
aacaagaagtccaagcctactcccgtgattgagaccggatcacagaaagcacaagacttc
cagatatgtatcacaatcatcgaagcccgccagctggctgggctgaacatggacccagtg
gtgtctgtacagattggtgaggagagaaagttcaccagtcaaaaggagtccaccaactgt
ccatactacaatgagtacttcgtttttgacttccacatgtctccagacatgttgtttgac
aagatcatcaccttgtccgtgctacactcccgcaacctgctgcgctctggcaccatggtc
gggtcgttcaaactggatgtgggcaccgtctacgatgctcctgatcaccagttctaccac
aagtgggccctgctgacggacccggaggatgtgacaggtggccccaagggttacctgaag
tgtgacatcgccgtggtcgggaagggggactccatcaagaccccgcccaagagcagcgag
gatgatgaggacgacatcgaggcaaatctgctgctcccagagggagtaccagcagagaga
cagagagccaagttcattgtcaagatcttcagggccgacggccttccgaagatgagcact
ggactgatggccaacgtgaagaaggcttttaccagcgagactagagacctcgtggatccg
tttgtacaagtggagtttgcaggacaaagggatggtcgcacttccgttaagaaaggcagt
tatcaaccggagtggaacgagcaaatcgttttctgcgaaatgtttccgccgctttgtcgg
cgctttaagatccaactgcgtgatcatgacagtgtgaacaacgaagtgattgggacacat
tttcttgatctgaacatggtatctgatgatggtgacaaagggttcttgcccacttttggt
cccaccttcatcaacctgtatggcagtacgagagactactccctcatggacgaacatcag
gcactgaatgagggagttggcgagggtgttgcgttccgcgcaaggctgctgatccaactg
aagtgtgaaatgtgtacagacgaaactgaaggagtttcgaacgaagtgcaagtggagtcc
tgctctgccctttctgatactgctgctggccgtatcgatgagttcttcctgttcggctca
ttcttggaggcaaccatgatcgacaggaagatcggcgacaagcccatcacattcgagctt
agcatcggaaactacggtaacaacgttgatggccaaaacgccagcacagctccaaaggga
ggagatggaggggacagttcagaggaggaggacgaggaggatggaagttctgctaactcc
gtcactccagccatcaaacctgtaaccaatgacagattcttaagtaccctccagttacga
aggctagatcgatactactaccacatgccgttctatgaggagaaaccatgtgtctacatt
aagtcccgctgggaagaccatcggcgcagactctacaaccagaacatgctggccaaagtc
attgagaaaggggaggaaggcatgagtgacgtccaagagatgatcaccatggagcggcca
caccctgagcgccgccttcgaggggtactggaagaactgtctgtcggctgcaaccgcttc
tgtagcctgttgcagaaggccagcgggaaagacgggaatagtgctggtaggaccaaactg
gacaaagaacgtgcacgcacgctcctgagagaagtcgaaatcattggaaaggaagccaag
aagatgaaggccaccgtgcgggcttccacatacaaggacaaactcaagcaaacccagtcg
tttgtcaacaagctcaaagttctcaacattgagccccaggacagcctgcccgacatcttc
atctggatgctgagtaacaacaagcgcatcgcctacacacgcttcccatcccgggacatc
ctgtactccattgtggctgaggagacgggtgtcaactgtggcaaggtgcagaccctcttc
ctcaagctgcctgggaagcgcggtaccggccccagcgggtggaccatccaggccaaactg
cagctctacctctggctgggcctgaacaaacacaagaaggacttcctgggtggcctgccg
aagggatacgagcagactaaggctattcaaagtgctggccgcctgcagtctgtccctcct
gtcactctcaaatatgaagaacgtcagaccttccagctgcgggcccacatgtaccaggct
cgcagtctggtggcctccgatgcgtccggtctctccgatccgttcgcgcgcgtcgtgttc
tccaccaggagcatgaagacggaggtcatttccgagacgctggcgccgacttgggatcag
ctactggtgttcgacgacctcaccttgttcggcaaccccaagtccatggctgaggagcca
ccaaccatcgtcattgaaatctttgaccaggacaccgtgggaaaatcagaattcatagga
cgagccctggccaagccgaccatcaaaatggccaacgagcggtacaccctgcccaagttc
ccccccacgctggattggtaccccatcttccggggccaggagcaggcaggggagctgctg
gctgcttttgaactgatacagatgcccatacatgaggaagagatccttcaggctctgtac
gaacagtgggacgacaaatcaaagtctgagttcccgaggggagccaagctgcccccagtg
acccaaccgctggagtctgaccgtggccccattgtccctgtaccacgtggaatcaggccc
gtggtcagcaagcacagaatagagatcctgttctggggtgtgcgtgagctgaagcgcctc
cagctgaccagcgtggaccgcccacgtgtggacatcgagtgtgccggacagatcatacag
tccaccgtcatcgcaaacgccaagaagaaccccaacttcagcattcccgtcaagttcttt
gacgtggacttgcctgaaaatgaactgttcatgcccccactgaccattcgctgtgtggac
tgccgcacctttggccgattcacccttgtgggcacccatgtggtgaactctctgcacaag
ttcatgtacaagccctcaccagagacacccgagggcagtattgccaatggcaccctgcca
atagacgatggccgttctttccatggctccatccatggcgacactcgctccgtgagatcc
gtccgagctgacgacgtggccgtcaaaatcgacaccatgtcgcacgtctcccattcctct
caacacaaggaagaaacggtcattaagattgatcccgtgagtacacacatgaatggtgag
gccaagacagaggtttacaaagatctctccatgaacgctagccagcttgccccagaatcc
tcggagggtgacaacaaggagaaggaaggggaaggaggagaagaaggaggggagatgaag
aagaagaagaagggaggcaaggaggaggagcaggaagaagaggagacagatgagagtacg
ctggactggtggtccaagtactttgcatccctggagactctccgagagtggcaggaacaa
caggaagctatcgacaaaaaggaagaactagaggcagagaaggaggacagccagacagac
ggcaaaatcatcgacaaaggaaaattcctgtccaccacagctactaagactgtgaaatac
cgtggtgagcctgaagagaaggacaagaagaagaaaaagaaggacaagaagaaggacaag
aagaaggataaagacaaggacaaagataaagatgacaacaaggctggagaggagggaaaa
tcaaaactcgctaaactgagcccaaagacgtcccgcaagaaggataagagctctggggtc
accgagctgaagcggaacatctatgagggtatagagcaattgaagatctacccctgtcct
ctggaggatgtggatgactttaatggcttccacgaatggctgcacactttcgaactgctt
cgcgggaaaaaggaagagggtgacgacgactcccgtattgtcggcaagtttaagggttgc
ctgcaagtgtacaagcccaaggagggcgacgatggcaccggcagtgttattggtgggggc
gagatgatcaacccaacgggcatgtttgcacacatccccaacaatgaccctgtcggggta
ctggttcgagtctacatcgtcaaggccattgatctccaccctgccgatgttaacggcaag
gctgacccatacctcaagcttagtctgggcaagcaccaggtcaatgacaaggagaactat
gtgtcgaaacaactcaaccctgtctttggcaagtcgtttgactttgaagcgactttcccc
atggagtccatgctgtgcgtgcagatctttgactgggatctggttggaattgatgatctg
attggggagaccaagattgacctggagaaccgctactacagccgccaccgcgccacctgt
ggagtatccagcttctatgccattcatggatacaacgcatggcgcgacccccagaagcca
actgaaatcctgaagaaactgtgcaaggacgggaaggtcgacgggccccacttcagcccc
gggaaagtgcgtgttggaggccgtgtcttcgagggggcaaaggaagtggaggatgagaat
ggtgggaagaggccctctgacgaaccatctgcacttgtggccttgaaccaatggcacgag
atcgccaaggcgggctgcgcgctggtcccagaacacgtggagaccagacctctgtacaac
cctgaaaagccgggcatagagcagggcaaggtggagatgtgggtggacatgttccccatg
gacatgccaccgcccggccctcccaccgacatctcccctcgcaagcccaaaagttatgag
ctgcgtgtcatcatctggaacaccgatgatgtgattgccgaggacgatgacttcttcact
ggggagaagatgtctgacatctacgtcaagggctgggtgaagggcaacaccgaggacaaa
caggagactgacattcactaccgatcactgactggggaaggaaacttcaactggcgtttc
atctacccatttgagtacctggcagcggaggagaagatcgtgatctccaggaaggagtcc
ctcttctcctgggacgagaccgagtacaagatcccggctcgcctcaacctgcaggtgtgg
gacgccgatcacttctctgccgacgatttcttgggatcccttgtgatggatctgaatcat
ttcccacgaggagccaaaacatccaagcagtgcaccctggacatgctgaagaccgacggc
agtgtgccgcaggtcaacctcttcaagcagaagcgtgtcaaggggtggtggccattcgct
gcaaagggtgaagatgatgaactcgagctcactggcaaagtagaagctgaactcaacctc
atgtctgcagaagaggctgagaagagccctgctggactgggccgaaatgaaccagatcct
ctggagaaacccaaacgtcctgactcctctttcatgtggttcttgaaccctctgaaatct
ctgcgctacatcctatggaagaattacaagtggacaataatcaaaatcgtgtgtgtgctg
ctcttggcggcctttatcggtgtgctcctctactccatgcccggctacatggtcaagaag
atactcggggcctag
DBGET
integrated database retrieval system
