Branchiostoma floridae (Florida lancelet): 118412445
Help
Entry
118412445 CDS
T01074
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118412445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
Sina_ZnF
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_5
TRAF3_RING
Fib_alpha
CCDC39
HmpF
zf-C3HC4_3
ATG16
RING_XB3-XBAT31
Rod_CreS
CALCOCO1
ADIP
Macoilin
zf-C3HC4_5
IFT57
CC_Liprin_beta
CCDC18_2nd
CENP-H
Exonuc_VII_L
TMEM120A-B
DUF16
CCDC89
Motif
Other DBs
NCBI-GeneID:
118412445
NCBI-ProteinID:
XP_035671213
UniProt:
A0A9J7KWU3
LinkDB
All DBs
Position
1
Genome browser
AA seq
540 aa
AA seq
DB search
MYTDLQYVFPLDDRYKCPICSSVLDAPRQTSCGHRFCDRCLQQAFRKGDAHCPIDKEVLS
ANEVFRDRCAEKEILQLVIYCPNREFGCKEQLPLKELESHLQECKYTRVECIHKDQGCDA
LFPRHQLAQHLEKECNFRQVSCKFCSEGIPLALMQDHLAQCPRAMASCPNGCGLTDVTRE
QVDQHLLEDCPLVEVECSYSGSGCSFKGQRGQLEEHNALSMAEHMGMLTASLARLELSYS
ESRRELQEVSNQRDLLQNTVEQQVTEITSLKQKVDKQDTKIGALQKMVANQTDKLTKFEE
DLTSAAKKVDVEDQKKDLVAVKETMKITENRLTMLETRGSGGGGLFSGVAGEVETQLASQ
DRQLGIHDVRLAEMDLRFQILETASFDGTLLWKIKDYTRRKHDATTGRTLSLYSQPFYTS
RNGYKMCARVYLNGDGMGKGTHMSLFFVVMRGDYDALLPWPFRQKVTLMLLDQDQGRRHL
SDTFRPDPTSSSFKRPTSDMNIASGCPLFVSQAVVEGSPYLKDDTIFIKVIVETSDLVGP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtatacagatctacagtacgtctttccacttgatgatcgctacaaatgcccgatttgt
agctctgtattagacgcaccccgccagacgtcgtgtgggcaccgcttctgtgacaggtgc
ttacagcaagccttcaggaagggtgatgcgcactgtcctattgataaagaagtcctttcg
gcaaacgaagttttccgagaccggtgtgctgagaaagagattctccaacttgttatctat
tgtccaaacagagagtttggctgtaaagaacaacttccactgaaagaattagagtctcac
ctacaggagtgtaagtacacccgagtggaatgtattcacaaagaccaaggctgcgatgcc
ctcttcccaagacatcagctagcacagcacttggaaaaggagtgcaacttcagacaggtg
tcatgcaagttttgcagcgagggaattccactggctctgatgcaggaccacctggcgcag
tgtcctagagcgatggcgtcctgtccaaacggatgtggcttaacagacgtcacgagggaa
caggtggatcaacatctccttgaggattgtcctcttgttgaggtggagtgcagctacagt
ggcagcgggtgtagtttcaagggccagcgaggccagctggaggagcataatgccctgtcc
atggccgaacatatgggtatgctcactgcaagtctcgcccgcttggagctcagctattca
gagtccagaagggagctgcaagaagtttccaaccagagagaccttctgcagaacactgtc
gaacagcaggtcactgagatcacatcgctgaagcaaaaggtcgacaagcaggacacaaag
ataggggctttacagaaaatggtggccaaccaaactgacaaacttacaaagtttgaagaa
gatctgacttcagccgccaaaaaggttgatgtggaggaccagaagaaggacctagtcgca
gtgaaagagacaatgaagataacggagaacagactgacaatgttagagaccagagggtcg
ggaggaggtggactgttttcaggtgtagcaggtgaagtcgagacacaacttgcatctcaa
gacagacaactcggcatccacgatgtccggctggctgagatggacctccgcttccagatc
ctggagacagccagctttgatggtaccctgctgtggaagatcaaggactacaccaggagg
aagcacgacgctaccacaggcagaactttgtccctgtatagccagcccttctataccagt
agaaatggctataagatgtgtgctagggtgtacctgaatggggatggtatggggaagggt
acgcacatgtccctgttctttgtagtcatgagaggagactatgatgccctgctgccctgg
cccttcagacagaaagtaaccctgatgctgctagaccaggatcagggcaggcgccacctg
tcggacacgttccgccctgacccgaccagcagcagcttcaagcgccctaccagcgacatg
aacatcgcttcaggctgcccgctgtttgtgtcacaggctgtggtggaggggagcccttat
ctcaaggatgacacgatttttatcaaagttattgttgagacatcggacttggttggtcca
tag
DBGET
integrated database retrieval system
