Branchiostoma floridae (Florida lancelet): 118413602
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Entry
118413602 CDS
T01074
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118413602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118413602
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118413602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
EGF
FXa_inhibition
EGF_3
Plasmod_Pvs28
EGF_PEAR1L
EGF_MSP1_1
Glyco_hydro_98M
Motif
Other DBs
NCBI-GeneID:
118413602
NCBI-ProteinID:
XP_035673025
UniProt:
A0A9J7MMW4
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All DBs
Position
1:complement(22354561..22383334)
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AA seq
1421 aa
AA seq
DB search
MDLRTLAPVFFFVVCIGNVQSSGYSSSRRNTYSGSIPAGFRVRYVARGTAGQNPSTSQQR
HSGGKDRQAWQLRGPNVCSPNRCCPGWKINTSTRTCTTPRCAFKCLHGGICVRPNRCSCQ
SGYRGVACHIAPRSYGKSTGRTGSSPDGQRPTGTAEDRTLGPVQPKRRGDGFEAQAYTST
GGRQLYSVGRQRQTVSLGSNGQITHLQEGQGRQRITLTPGQSVSFVGGESHRVVSATAGQ
SVPLRPGQKVTIVGLTNRQGLSGSGARSGTRENEDQRSGVRVSQIVGTGGRQQTVTLPDG
RTVSLAGFRVSSPGGVALPMAAQVGGSGLLGKQSTDPLAGEGSLSGVTVVGQQNVRGMCY
GDIKGRQCVDPLGGKARVTQAECCKTFGKGWGDSCFMCPHMLGQVDGCPAGHQRNQTTGG
CADIDECKAFPGLCENGRCTNNPGSFHCSCRVGYMLDATGTRCIAESRGRCYKEMTDRGE
CGVDLTGLSITKHVCCCTIGESWGPQCERCPDPNSQNFKWLCPGGLGFQRRTAYIGGGGR
TDEQTRTDQVVDFDECSTMVNICQYGRCFNTIGSYYCLCNPGYRLEGSRTKCVAIPTRTN
CDTTIGLCPNGRCINFRDSYVCNCDSGYQYDPREKTCIERPRSICETMLNLCPNGRCRPS
GNSYTCVCNPGYKLDQVRKTCVAERTVSVCESRPGVCRNGRCVDSRGSYLCMCNPGYRQD
LGGRACADINECSYRNGRCHHGTCVNTEGSFTCRCDDGYKLSPDRKSCIDLDECPSQTTC
TSPNQCLNFMGSYYCMCSAGYRHHGDNTKACIEEEINECAIDPSLCQNGECINTRGSFVC
RCDTGYKTDDTMTQCLDEDECQLDPSLCPNGRCYNNEGSYVCACDRGYRIDASRTQCLDV
DECEANSKLCRDGECVNTPGGYRCRCDQGYIPSPDQRACVDVDECSIGNPCGQSVCQNLP
GHFTCVCTQGLVFDEDTQRCMSAWLAEQRQSRKQCFSELTDLDFGCADNPAGFNVTKEEC
CCSLGVAWGDSCELFPCPSRNAADYLELCATLSGFLMKHDQNNEIYIEDINECELFNNPC
NNAICRNTPGSYVCICPDGYFLNEQELTCTDINECAQFPCGSGTCLNLPGSYECSCLGNQ
IPDPTKKRCIERPLTLPLEPPAASYTVFEPRDVCWTSVIGPNLFCSNALPFNMTRAQCCC
RSDVQAWGVDCRLCPKLGTDAFRDLCERIKPGTSVDQHAFYMENIGPVAGQVPLIPGQQP
GLDRRPGWLGPYAGGAPPGRTPPAQLPPGILAPRQGHPSAAYVPSEAQSLQQGYASETLD
ADCKIEGGCGFGRCLRVDGGGYICDCYSGYKLDNKGLKCVDMNECEELGDLCRNGTCINT
AGSYICHCHPGHAPKPDQPNFCVKQQNTEPPTQDSLSRTEE
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggatctcagaacacttgctcccgtcttcttcttcgttgtttgcatcggaaacgtccag
agtagcggatactcttcctctaggagaaatacctacagcgggtcgattccagccggtttc
agggtgcgttatgtcgcacggggcactgccggacagaacccatccactagtcaacaacgg
catagtggaggcaaggatagacaggcatggcaactgagaggacccaacgtctgttccccc
aatagatgttgccctggatggaagatcaacacatcgactcgtacatgcacaacaccaaga
tgtgcgttcaagtgtttacatggagggatctgtgtgcgtcccaaccgctgcagctgccag
agcgggtaccgaggagtggcgtgccacatcgcgcctcggtcctacggcaagtcgacgggc
agaacaggttcatcacccgacgggcagagaccgacaggtacggcggaggaccgaaccctt
gggccggtccaaccaaagaggcgaggcgacgggttcgaagcacaggcgtacacttcaacg
ggaggtcggcagctgtactctgtcggtcgccagagacaaactgtctctttaggatcgaat
ggccaaataacccacttacaagaaggccaagggcgtcaacggatcaccctgacaccgggt
cagtcagtgtcgtttgtcgggggagaaagtcaccgagtcgtcagtgcgacagccgggcag
tctgtacctttgcgtccgggacaaaaagtcacgattgtcggtctgactaacaggcagggt
ttgtctggcagtggggcgaggtccggtacgcgggagaacgaggaccagcgaagtggagtc
agagtatcgcagatagtgggaacaggtggcaggcagcaaacagtgaccctcccggacgga
cggacggtgtcgctggccgggttcagggtgtcgtcaccaggaggcgtggcgcttcccatg
gcagcacaagtcgggggctccggccttctcggcaaacagtccacggaccccctggctgga
gaggggtccttgtccggagtgaccgtggtgggacagcagaacgtacgcgggatgtgttac
ggagacatcaagggtcggcagtgcgtggaccctctcgggggcaaggccagggtgacgcag
gcggaatgctgcaagaccttcggcaaaggctggggagactcctgcttcatgtgcccacat
atgttaggacaagttgacggttgtccagcaggacaccagaggaaccagacaacagggggc
tgcgctgatattgacgaatgcaaggcgttcccgggtttatgtgagaacggacggtgtacc
aacaacccaggaagcttccactgcagctgccgtgtgggctacatgttggacgccactggc
accagatgtatcgcggagtcacggggacgttgttacaaagagatgacggacagaggggag
tgtggtgtagatctgacaggactctccatcaccaaacacgtgtgctgctgcaccatcggg
gaaagctggggacctcagtgcgagaggtgccccgatcccaactcacagaacttcaaatgg
ctgtgccctggaggcctgggctttcagaggaggacagcatacatcggaggtggtgggcgg
acagacgaacagaccaggacagatcaagtggtggactttgacgagtgttctaccatggtg
aacatctgccagtatggacgatgtttcaacaccatcgggtcctactactgcctctgcaac
cctggctaccggctggagggttcaaggacgaaatgcgtagcgatcccaacgcggacgaac
tgtgacactacaatcggcctttgtcctaacgggagatgtatcaacttccgcgactcctat
gtctgcaactgtgactccggctatcagtatgatcctcgggaaaagacttgtatcgaacgt
ccccgcagtatctgcgaaacgatgctgaacctgtgcccgaacgggagatgccgacccagt
gggaacagctacacgtgcgtgtgcaacccagggtacaaactggaccaagtcaggaaaaca
tgtgttgcggagcgcaccgtgagtgtgtgtgagagcaggccgggtgtgtgtagaaacggc
cggtgtgtggacagccgcggctcgtacctgtgtatgtgcaatcctgggtacaggcaggac
ctgggcgggagggcgtgcgcagacatcaatgaatgcagctaccggaacggcaggtgccac
cacggcacctgcgtcaacacggaggggagcttcacctgcagatgcgacgacggttacaag
ctgtctccggaccgtaagagctgtatagacttagacgagtgcccatctcagacaacctgt
accagccccaaccaatgtctcaactttatggggagttactactgtatgtgttcggcaggg
tatagacaccacggggacaacaccaaagcttgcatcgaggaagagatcaacgaatgtgcg
attgatccgagtctctgtcagaatggagaatgtatcaatacacgagggtccttcgtgtgt
agatgtgacaccggctacaagacagacgacacgatgactcagtgcttggatgaagacgag
tgccaactcgaccctagtctctgtcccaatggccgttgctataacaacgaggggtcgtat
gtttgcgcctgtgacagaggctatcgcatagacgcatcacggacgcagtgtcttgatgta
gacgagtgtgaagcaaactcaaagttgtgcagagatggtgaatgtgtcaacacccccggt
ggatacaggtgcaggtgtgaccagggatacatccccagtcctgaccaaagagcgtgtgta
gatgtggatgagtgcagtattgggaacccatgtggacagtcggtctgtcagaacctgcca
ggccacttcacctgcgtgtgcacacagggcctggtgtttgatgaggacacccagaggtgc
atgtctgcttggctggccgagcagaggcagtcgcggaagcagtgcttctctgagttgacg
gatctagacttcgggtgcgctgacaaccccgcagggttcaatgtcactaaagaagagtgc
tgctgcagtctgggggtggcatggggagactcctgcgagctgttcccatgcccaagtaga
aatgcagctgactatctggagctctgtgcaacattaagtggcttcctgatgaagcatgat
caaaataatgagatttatattgaagacataaatgaatgtgaactgttcaacaatccctgc
aataatgcgatatgtaggaacaccccaggcagctacgtatgcatctgtccagatggatac
tttctcaacgagcaagaacttacatgcactgacattaatgaatgtgcccagtttccctgc
ggctcagggacatgtttgaaccttcccggctcctatgagtgcagttgtctcggcaaccag
attcctgatcccaccaagaagaggtgtatagagcggccactgaccttacccctggagcct
ccggcagcatcatacacagtatttgaaccacgtgatgtttgttggaccagcgtgattggc
cctaacctgttctgctccaacgccctgccgttcaacatgacccgtgcccagtgctgctgc
cgtagtgatgtgcaggcctggggagtggactgtaggctctgccccaagcttggtacagat
gcttttagagacctgtgtgaacgaattaagccaggaacttcagtagaccaacatgctttc
tacatggagaacataggcccggtcgcaggccaggtgcccctcattcctgggcagcagccc
ggcctggaccgcagaccagggtggctgggaccttacgccgggggcgcaccaccgggaagg
acacctccggcccagctgcctccagggatcctggcacccaggcagggacacccgagcgct
gcctacgtcccatcagaggctcagtcgttacaacaggggtacgcttcggagacgttagat
gctgactgtaagatcgagggcggctgtgggttcggtcgctgcctcagggtcgacggggga
ggctacatctgtgattgctactctgggtacaaactggacaacaaaggcctgaaatgtgtt
gacatgaatgagtgtgaggagctgggagacctgtgcagaaatggcacctgcatcaacact
gctggttcctacatctgccactgtcatcctggtcatgcacccaagcctgaccaacccaac
ttctgtgtgaagcaacagaacacagaaccgcccacacaggactcactgtccagaacagag
gaatga
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