Branchiostoma floridae (Florida lancelet): 118415173
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Entry
118415173 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118415173
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118415173
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118415173
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118415173
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_3
Ank_2
TRP_2
Ank
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118415173
NCBI-ProteinID:
XP_035675447
UniProt:
A0A9J7L410
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Position
5:13182914..13189288
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AA seq
728 aa
AA seq
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MEARFLGLVRDNDVLEVTVALSEVNGITDFPLDLGSLRDKFGRSVLELAVDSGSREVAEV
LLDHGAPIGDALLYAVDRQDVDAVRILLQREIMRGPTYCVDLEDGSSAFPSYMTPVMLAA
MKNNYDILEMLLQAGFPTPAPDDYKWTTDISESIAWLDAYRAVCSPSYILLTSTDPFRTA
FRTAKALRDVLWKREQYRPEVEQLADQCETFAYELLGEVRSTKEIEAILGHPCTPEDSTC
GKSTSTLRLAMDLQLKQFTTHPLCIDHVEKLTYKKIIDYDQSFSGWEQASSAYGMAIKAI
LGLAYPFLCMAHLLAPQSKIGAFSSIPVVRTMYWTYSWIILLVLLMVESQSYRVGPAEID
SIVRGTPVPSIRISPSAILIMIWVTDIAWKNLQDVWSEGLMEHFKHLWNILDFMMVAVFL
AQFTLRVWASLKLDVYSADSTVADDWARRANENTLQPIVVADALFSIFTIVVFIRAISLF
TSYRFLGMLLISIGRMLMDIAKFIVFSGLILFAFACGLNQLYWFYGTMHQYLCSKYSKSN
LQTACSNLFGFDTLPNSLQALFWTGFGVLDLTTLDLKPGTSPVDLFQIQEWPVITETVGK
VIYTVYQVIGVLVIVNLIIAIMSDSYTRTEEDKRTDWAFSMIKQQLYNLDVDVSLPPPFG
LMMSVRNALVRPVLILCGRRNNPPDSDTNAERAVHPAQSSLPAKQDVYNMVVGRLITRYL
LRKERSLE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacgttttctgggtctcgttcgcgataacgacgtgttggaagtaactgtggcg
ctttctgaggtgaatggtatcacagactttcctcttgaccttgggtcactccgggacaag
ttcggcaggtctgtactggagctagccgtggacagcgggtcgcgggaagtggccgaggtt
ctgttagaccacggcgcacctattggtgacgcgctgctgtacgcagtcgacagacaagac
gtcgacgctgtgcggatcttgctgcagagagagatcatgagaggtccaacgtactgcgtg
gaccttgaggatggcagcagcgccttccccagctacatgactccggtcatgctagcagcc
atgaagaacaactacgatatcctagagatgctgcttcaagctggcttccctacacctgcg
ccagacgactacaaatggacaaccgacatcagcgagtccatcgcttggctggacgcctac
cgtgcggtgtgcagtccgtcctacatcctcctcaccagcaccgacccgttccgtacggcc
ttccggacggccaaggctcttcgggacgtcctttggaagcgggaacagtaccggcctgag
gtggagcagctggcggaccagtgtgagacgttcgcgtatgagttactgggggaagtacgg
tcaactaaggaaatcgaggccattctcggccacccatgcaccccagaggactctacgtgt
ggaaaatccacctctactctgcgtttagccatggacctccagttaaagcagttcacgaca
caccctctgtgtattgaccacgtcgagaagctgacgtacaaaaagattattgactacgac
cagtccttcagcggatgggagcaggcgtcctctgcctacggcatggctatcaaggcgata
ctcgggctggcgtatccattcctgtgcatggcccacctcctggcaccccagtcaaagatc
ggagcgttttcgagcatccctgtcgtccggacgatgtactggacctactcctggatcatc
ctgctggttctgctgatggtggagtctcagtcctaccgagtcggtccggcggaaatagac
agcatcgtcagaggcacccctgtaccgtcgataagaatatctccttccgcaatactgatc
atgatatgggtcactgacatcgcatggaaaaatttgcaagacgtttggagcgaaggcctg
atggaacattttaaacacctgtggaacatcctagactttatgatggttgctgttttcctg
gcacagttcaccctccgggtttgggcatctttaaagcttgatgtctactcagcggatagt
acggtggcggatgactgggcacgcagagcaaatgagaacaccttgcagccgattgtagtt
gcggatgccctcttctccatcttcacgatcgtcgttttcatccgagccatatcgctgttc
acctcgtatcgctttctggggatgctgctgatctccatcggacgaatgctcatggacatc
gcgaagttcatcgtcttttccggactgatcctgtttgccttcgcgtgcggcttgaaccag
ctgtactggttctacgggacgatgcaccagtacctctgttccaaatactcaaagagcaac
ctacagacggcttgttcgaatttatttggttttgacacacttcccaactccctacaagcc
ctgttctggactggctttggtgttcttgacctgactacgcttgacctgaagccaggtaca
agtcccgtggacctgttccagatacaagaatggcctgtcatcacagagactgtcggcaaa
gtcatctataccgtgtaccaagtcattggtgtgttggttatcgtcaatctgatcatcgcc
atcatgagcgactcatataccagaacagaggaggacaaacgcactgactgggccttttcg
atgataaaacagcagttgtacaaccttgatgtggacgtgtccctgccgccacccttcggc
ctgatgatgtccgtgaggaacgctcttgtccgcccggtgttgatattgtgtggtcggcga
aacaatcctcctgattcagacacgaacgcagagagagccgtccacccagctcagtcatca
ctgcctgcgaaacaggatgtgtacaacatggttgttggcaggcttataaccagatatttg
ctgcgcaaggaaaggagtctggaataa
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