Branchiostoma floridae (Florida lancelet): 118416830
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Entry
118416830 CDS
T01074
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118416830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118416830
04121 Ubiquitin system [BR:
bfo04121
]
118416830
Membrane trafficking [BR:
bfo04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
118416830
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118416830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SPT8
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
F-box
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WD40_like
Beta-prop_Nup120_160
PALB2_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF12
WD_LRWD1
F-box_4
Motif
Other DBs
NCBI-GeneID:
118416830
NCBI-ProteinID:
XP_035677993
UniProt:
A0A9J7LAL5
LinkDB
All DBs
Position
1:8123908..8135003
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AA seq
489 aa
AA seq
DB search
MSMFADREAVANNIVAAFDAFTPEEQNVVLRQILLKCQPLQLRFVYAELKTLLAVDFVAH
LPRELTERIFSYLDGVEMSRAACVSRLWREKTNNEGLWQRLCKLKRWEHFGFNEDLSREE
SCSSPTSTSRTSPRFTPVNSDVISLSPLCHWKDVYIRAHHLNKNWATGKYTVMPALRGHE
GRVNCMDCDGKLLVSGGGDNSVRLWDLATGKCINQLEGHTDSVTGIELRNNIVVTSCADS
VIRVFEASSGRCLKVMQGHTSGVEHLCFDGANLVSASNDRTVRVWSLSSGKCIHNLTGHT
DDIQLLCMHGDLAVSSSWDQTLRLWDIRRGLCLQILVGHAEVVYCCQFDERRIVSGGADS
FVKIWNPQTGECTKTLSGHTGEVYCLKYNEDVIASGAADSIVRLWSFAGECLHELREHIG
VVRCLLQEGDRLISGGDQKKVVIWNTKEGKLLNVVHRNPTLLHLMWANETKLVLASPESP
GTVSILSYW
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtttgcagaccgcgaagccgtagcgaacaacatcgtggcggcgttcgacgcg
ttcacgccggaggaacagaatgtggtgctgcggcagatcctgctgaaatgccagcccctt
cagctgagatttgtgtatgcggagctgaaaaccctcctggctgtggactttgtggcccac
ctgccccgcgagctgacagagaggatcttctcctacctggatggagtggagatgtcccgc
gctgcctgtgtcagcagactgtggagggaaaagactaacaatgagggattatggcaaagg
ctgtgtaaattaaagaggtgggaacattttgggtttaacgaggacctatcccgtgaggag
tcctgcagcagccccacatccacctcccgtacctccccgcgcttcacgcctgtcaacagt
gacgtcatctccctgtcaccgctgtgtcactggaaggatgtgtacatcagggctcatcac
ctcaacaagaactgggcgacagggaagtacacggtcatgcctgcactcaggggccacgag
ggcagggtcaactgtatggactgtgatggcaaattacttgtgagtggagggggagacaat
agtgttcgactgtgggaccttgcaacagggaagtgtattaaccagctggagggacacaca
gactctgtcactggcatagaactcaggaacaacattgtagtgaccagctgtgcagacagc
gtgatcagggtatttgaggcttccagtggtcggtgtctgaaagtcatgcagggtcacaca
tcaggggtggagcacctctgctttgatggggcaaatcttgttagtgcatcaaatgacagg
acggtgagagtctggtcattgtcatcagggaagtgcatccacaacctaacagggcacaca
gatgatattcagctcctttgtatgcatggagaccttgctgtcagctcgtcctgggaccag
accctgcggctgtgggacatcagaagggggctgtgcttacagatacttgtgggacatgca
gaagttgtgtactgttgccagtttgatgagaggagaatagtgagtggtggagcggactcc
tttgttaagatttggaacccccagacaggggagtgcaccaagactctgagtggacacaca
ggagaggtgtactgtttgaagtataatgaggatgtcattgcatcaggggcagctgacagc
attgtcaggttgtggagctttgcaggggagtgcctacatgagctgagggaacacatcgga
gtggtgcgctgtctcctgcaggaaggggacaggctcatctctgggggggaccagaagaaa
gtcgtcatctggaacacaaaggaaggcaagctgctgaatgtggtacacaggaacccgaca
ttgctgcacttgatgtgggctaacgagaccaagttggtgctggcctccccagaatccccc
ggcactgtctccattcttagttactggtaa
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integrated database retrieval system
