Branchiostoma floridae (Florida lancelet): 118417807
Help
Entry
118417807 CDS
T01074
Name
(RefSeq) interferon regulatory factor 8-like
KO
K09446
interferon regulatory factor 5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118417807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118417807
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118417807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
118417807
NCBI-ProteinID:
XP_035679433
UniProt:
A0A9J7LD65
LinkDB
All DBs
Position
6:3749418..3764365
Genome browser
AA seq
581 aa
AA seq
DB search
MATGGSTRAREPTTMPVAVPDNSRDRLRPWLYGMIDRGEVPGVEWLDADKKKFKIPWKHA
GKHEYDQDRDSKLFKEWAVHTGKFRPGIDKPEPAVWKTRLRCALNKHPKIHEVKNESQPE
DPINPYKVYVFSDKPIKSSAKQRHRSGSVSSGNSSDGYEDSRSPEEAVTPLAAPPSQQII
TAVTTSGVCLGNSPPRIFTEPQAFTSTTTTPSLGDTATSSMREDSLTKILQDMLGQPGHG
DGVQTMQELLQGMQGVPGLCPSGEFTIQEVSLPMDVTTAADNPAVITEPLYTNAPIKIET
QQLANVDMTQLGVGAEVTCDEDMETDDVMPKPVPTVPTAVVAPELRIYPAHELDIEVVYY
KAGKVFQHHVTNRTGCRLWFGDRNQPNLRQTVDPNLSPYLYGPADAEQILLPPRQPSNRQ
KDDEVVQGLLNNMERGLVLTTENGNISATRLCKTKVFWKSNDNRNGQAERLEREQVVPVF
DYQNYLRELSAYGNSGGPKPKCEVIFSFGKCWSDDVPLENTPIYVIVRSRTAQHLMMAVD
KGATDHDAQNALRSIDAMVSNSNEFDKLATDVKEYVKVKDF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagggtcaactcgtgctcgtgaacctaccaccatgcccgtcgcagttccc
gacaactcccgagaccggctccggccctggctatacggcatgatcgaccgcggcgaggtc
ccgggcgtggagtggctcgacgccgacaagaagaagttcaagattccgtggaaacacgcc
ggcaagcacgagtacgaccaggatagagattccaaactgtttaaggaatgggcggtccac
accggcaagtttcggccggggatcgataagcccgagccggcggtgtggaagaccaggctg
cggtgcgccctcaacaagcaccccaagatccacgaggtgaagaacgagagccagccggag
gaccccatcaacccttacaaggtctacgtcttctccgacaaaccaatcaagagcagtgcc
aagcagaggcaccggtccggcagcgtgtccagcggtaacagctcggacggctacgaagat
tcccgaagtcccgaagaggccgtcactcctctcgctgcacccccgtcccaacagatcatc
acagcggtgaccaccagtggagtctgtctggggaactctccgcctcgtattttcaccgag
ccacaggccttcacatcaacaacaacgacacccagtcttggagacaccgcaacttcgtct
atgcgagaggactccctaacgaagatcctgcaggacatgttgggccagcccggccacggg
gacggggtccagaccatgcaggagctgctgcagggtatgcagggcgtccccgggctctgt
ccgtcgggcgagttcaccatacaggaggtctccttgcccatggacgtcacaaccgccgct
gataaccccgccgtcatcacggaaccgctctacactaacgcgcccatcaagatcgagacc
caacagctggcgaacgttgacatgacccagctgggggtcggggcagaggtcacgtgtgac
gaggacatggagaccgatgacgtcatgcccaaaccggtgcccactgtccccacagctgta
gtcgccccagagctcaggatttatccggctcatgagttggatatcgaggtcgtctactac
aaagccgggaaggtcttccagcatcacgtgaccaacaggaccggctgccgtctgtggttc
ggcgaccggaaccagcccaacctgagacagaccgtcgaccccaacctgtccccttacctg
tacgggcctgccgacgcggaacagatcctgctgccgccgcgccagccctccaacaggcaa
aaggacgacgaagtggtgcaaggtctgctgaacaacatggagcggggtctcgtgctgacc
acggaaaacggaaacatctctgccacccgcctctgcaagaccaaagtcttctggaagagc
aacgacaaccgcaacgggcaggcggagcgtttggagagggaacaggttgtgccggtgttc
gactaccagaactacctgcgtgagctgagcgcctacggcaacagcggaggccccaagccc
aagtgcgaggtcatcttcagcttcgggaagtgctggagcgatgacgtaccgctggagaat
acgcccatctacgtcatcgtgcgcagccgcactgcgcaacacctgatgatggccgtggac
aagggcgcgaccgaccacgatgcgcagaacgcactgcgcagcatcgacgccatggtgtcc
aactcgaacgagttcgacaagttggccacggacgtgaaggaatacgtcaaggtcaaggac
ttctag
DBGET
integrated database retrieval system
