KEGG   Branchiostoma floridae (Florida lancelet): 118426751
Entry
118426751         CDS       T01074                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118426751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bfo03000]
    118426751
   04121 Ubiquitin system [BR:bfo04121]
    118426751
   03036 Chromosome and associated proteins [BR:bfo03036]
    118426751
Enzymes [BR:bfo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     118426751
Transcription factors [BR:bfo03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    118426751
Ubiquitin system [BR:bfo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     118426751
Chromosome and associated proteins [BR:bfo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118426751
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     118426751
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC JHD F-box LRR_6 Cupin_8 PHD zf_RING_Vps8
Other DBs
NCBI-GeneID: 118426751
NCBI-ProteinID: XP_035692199
UniProt: A0A9J7M140
LinkDB
Position
11:complement(4662036..4727541)
AA seq 1195 aa
MESKSGSGRQLRAKPPKHYDDEEEIEDEIEGKRTFSVEEKLKSDRFTEDFVEYMEGTDFG
LKYFQKNGFHNPICFKNKEGLGIRIPGQEFNVNDVRQFVGSRRMVDVMDVNTQKGIEMTM
QQWTKYFEQKEREKLYNVISLEFSHTRLENHVVQPKVVRQIDWVDTAWPPHLKDKQTEST
NAIADMKYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHILHGGKVFWLIPPTPENLELYE
KWVLSGKQGDLFFGDMVKNCARIRLEEGYTFFIPTGWIHAVYTPKDSLVFGGNFLHSFSI
PAQFRVWDIEDRTHVPMKFRYPFYEEIHWYLLDQYLSCLTGKSYLNKEILDRDDEDSQEA
TQLKVILESKVTENVRVCAKEGRTTPVKKEKDDSEDTHDTRKQQNGHHVNGDRDKGEESK
VNGGPRVGTRTRRSRVRGMEDEEDDSKSKESLLEERSESPKPAKFDKKSVSQSDFTKTKD
NQSENDVEEKDTENSKTEHAGSEKAAGLGEDRQYVHLTKYELEGLGYLVDRLEKQPANKR
NVPDALTDPDSLLKDVKTLLEEHKPDKEEESVTGKPSIYWPQSENRIKPVKKKTYGASSS
AAKPKMKSATGNISRRRTRCRQCEACTRGDCGECHFCKDMKKYGGPGRMKQSCIRRKCLR
PALPNNASCKVCGSDDRDDESDTTLMECVICGEIVHPDCLQCEGEGVVNDDLPNSWECPK
CSLEGKTEKMMCRVMKRPHAAEGRSADGDSPTGKKRKESSTSSEVSDDSPKKGSTAEEIK
HPGKRARSNESLRSENNRSLKKKRHHSESPRPGTSDLEKEKHGGNKKAFGKKLSGAVNGH
SQPITLVKRGPPNLRRSPRGRKARPPSPARPLKLEQRVIRPRPISPPNDSMILNDGTNHP
LPRKLWMLIFQNLANKELCSCMAVCKMWNRWCTFHRLNQPSDSSPQCLATCKTWNRWGND
HRLWKVIDLSYARTLNPSMLEGVVRRQPMTLDLSWTNVPRRHLSWLIQRLPTLKHLVLSG
CAWSGVSALCTSTCPLLRSLNLCWAEGIKDSTMKDLLSPPADRPGAPDNRSRLRMMTDLR
LAGCDVAEGTIQLLVKHMPHLSHLDLSYCTKISDSCIELLTAEGSPIRDSLTDINLMGCR
KLSDDSLKLLSHCPNLLKVDVRSCAQVSPEACQQFACGREEPMAIKEDKLIMLAP
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggaaagcaagtcaggctctggccgccagttgcgcgccaaaccgcccaaacactacgac
gacgaagaggaaatcgaggatgaaatcgaaggaaaaaggaccttcagcgtcgaggaaaag
ctcaagtcggatagattcaccgaagacttcgtcgaatacatggaaggaactgatttcggc
ctgaaatactttcagaaaaacggcttccacaatccaatatgcttcaagaacaaggaagga
cttgggataaggatacctggtcaggaattcaacgtcaacgatgttcgacagttcgtaggg
agcaggcgcatggtggacgtgatggacgtgaacacgcagaaggggatcgagatgaccatg
cagcagtggaccaagtacttcgagcagaaggagcgggagaagctgtacaacgtcatcagt
ctggagttcagccacacccgcctggagaaccacgtggtgcagccaaaagtggtccgtcag
atcgactgggtggacaccgcctggccgcctcacctcaaggacaaacagacggagtccacc
aacgccatcgcggacatgaagtacccaaaggttcagaagtactgtctgatgagtgtgaaa
ggttgttacaccgacttccatgtggactttggagggacatctgtgtggtaccacatactg
catggaggaaaggtgttctggctgatcccccctactcctgagaacctggagctgtatgag
aagtgggtcctgtcggggaagcagggggacctgttcttcggggacatggtgaagaactgt
gccaggattagactggaggagggctacaccttcttcatacctacaggctggatccatgct
gtgtatactcctaaagactcgctggtgtttggaggaaactttctgcacagcttcagcatc
cctgcacagttccgagtctgggacatcgaggacagaacgcacgtgcccatgaagttccgg
tacccgttctatgaagagatccactggtacctgctggaccagtacctcagctgtctcaca
ggcaagtcatatctgaataaggagattttggatagagacgacgaagattcacaggaagcc
actcaactcaaggtcatcctcgagtccaaggtcacggagaacgtccgggtgtgtgccaag
gagggaagaacgaccccagtcaagaaagagaaggacgactcggaagacactcacgacaca
aggaaacagcaaaatggacatcatgtgaacggggacagggacaaaggggaagagtcaaag
gtcaatggtgggccaagggtcggcacgagaacacggaggtcacgagtgagaggaatggaa
gacgaggaggatgacagcaaatccaaggagtcgctcctggaggagagatccgaatcacca
aagccagccaagtttgacaagaagtctgtgagccaatcagatttcacaaagacaaaagac
aatcaatcagagaatgatgtggaggagaaggacacagagaacagtaaaacagagcatgct
gggagtgagaaagcggcagggttgggggaggaccgccagtacgtccacctgaccaagtat
gagctggaggggctggggtacctggtggacaggctggagaaacagccggccaacaagagg
aacgtcccggacgcactgacggatcctgacagtctgctgaaggatgtcaagacattgctg
gaggaacacaagcctgacaaggaggaggagtctgtcacagggaaaccctccatctactgg
ccgcagtctgagaacaggattaagcctgtgaagaagaagacctacggtgcctccagcagt
gccgccaaacccaagatgaagtcagcgacaggaaacatcagccgtcggcggacccggtgt
cggcagtgcgaggcctgcacgcggggggactgcggggagtgccacttctgtaaggacatg
aagaagtatggcggccccggacgcatgaagcagagctgcatcaggagaaagtgtctgagg
cctgctctaccaaacaacgcgtcctgtaaggtgtgcggctcggacgatcgtgacgatgag
agcgacacgacgctgatggagtgtgtgatctgtggggagatcgtgcaccccgactgtctg
cagtgtgagggagagggcgtggtcaacgatgacctgcccaatagctgggagtgtccgaag
tgtagtctggaggggaagactgaaaagatgatgtgcagggtgatgaagagaccccatgca
gctgaaggtagaagtgcagatggtgacagtccaactggcaaaaagagaaaggaatcaagt
acgagtagtgaagtgtcagatgactcaccaaagaagggaagcacagctgaggaaatcaag
cacccagggaagagagcaaggagcaacgaatcactgcgttcagagaacaacagaagtctg
aagaagaaacggcatcattccgagtctccccgacctggcacaagtgaccttgaaaaggag
aaacatggcggaaacaagaaagcctttggaaagaaactgtcaggagcggtaaacggacat
agccagccaatcacactggtcaaacgtggcccgccaaacctacgccgaagccctcgcggc
cgtaaagcacgacccccctccccagcgagaccgctgaagttagaacagcgggtgatacgt
ccgcgcccgatcagtccgccaaacgacagcatgatattgaatgatggcacaaatcatccg
ttgccacggaaactgtggatgctgattttccagaacctggccaacaaggaactgtgcagt
tgcatggcagtgtgcaagatgtggaaccgttggtgtacgtttcaccgcctgaaccagccg
tccgacagttccccccagtgcctggccacgtgtaagacctggaaccgctggggtaacgac
catcgcctgtggaaggtcattgacctcagctacgccaggacgttgaaccccagcatgctg
gaaggcgtggtccggcgccaacctatgacccttgacctgagctggaccaatgtacccaga
agacacctgagttggctgattcagaggctgccgaccctgaagcacctggtcctgtcgggc
tgtgcgtggtcgggagtctctgccctgtgcacctccacatgtccactgctgcgctcactc
aacctgtgctgggctgaggggatcaaagactccaccatgaaggacctcctgtccccccct
gctgaccgccccggggctccggacaacaggagccgtctgcgaatgatgacagacctgcgg
ctggccggctgtgatgtcgcagaaggaactatccagctcctggtgaagcacatgccacac
ctcagtcacctggacctcagctactgtaccaagataagtgacagctgtattgaactgcta
actgcggaggggtcaccaatccgagactcgctgacggacatcaatttgatgggttgccgg
aagttgtcagacgacagcctgaaactgctgagtcactgccccaatctgctgaaggtggat
gtgcgatcctgcgcccaagtgtctccagaggcgtgccagcagtttgcgtgtggcagagag
gagccaatggccatcaaagaggacaagctgataatgctggcaccctga

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