Branchiostoma floridae (Florida lancelet): 118427448
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Entry
118427448 CDS
T01074
Name
(RefSeq) integrator complex subunit 4-like
KO
K13141
integrator complex subunit 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118427448
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
118427448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
Adaptin_N
PDS5
Cnd1
SCD
API5
INTS7_N
Motif
Other DBs
NCBI-GeneID:
118427448
NCBI-ProteinID:
XP_035693146
UniProt:
A0A9J7M1R4
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Position
12:complement(16052469..16072820)
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AA seq
947 aa
AA seq
DB search
MAAHLKKRAYEEFSHVIQEEIKPPKKLKLARKPSPEEVLDLSTAKTPQAAVQLLLKFSNN
LPDESGAVEGAVRHLLEFWYKEKESYVRSKIAQLLGRLAHTPGFAAAALVDDLTSLLQAE
DSHQVRAQLLDSLLQIGRGLPLHQDLHRKLVAIAQQFLADTYHLVRSKCLELIGCLGTAG
VAGKGDLAVERILADASHDQDPRVRTSALQAMLTLHQRGLKLSLGGYQQSCAALTDDYEG
VRLAAVKLIWVYSQLYPETMIPVPSSNEELRLVDDGFAKICNMVNDLTMTVRAEAAGLLG
SLHRVSARFLEQTLDKKLMSHLRRKRTAHERAKEMYARGEWSTGKKWGDDAPKEELDTDS
ISLIDSGACGAFVHGLEDEFLEVRSASVDSLCELASNNPTFAQQSLDFLVDMFNDEIEGV
RLNSIRSLRKICRHVVLREDQLDTVLGALDDASKPIREALHELLCSCQQLSKACLNSTIH
AMLRNLSKYPSDRLSIWRCMQQVGSHHADLVATLTPELLCAHPYFDATEPDMDDPAYIAI
LILVFNAAVSCPTLQPMFPEHTLRHYDYLRDSLTELVPQLKLEGHRSLMMSPERQRRPSL
DDHGSFLQHILSRLGALPNMQHTAAVGLLQMTIRDLERVGSLEPQLAATAACTAMYLHCH
MLFRKALSDQLWAMPAALGAVQCATVRASVRQMLELTHQMEQLFLGLSSEEVGCVLQMRL
KAHTLQLLVDLRGRQAGAKGTKTSSQLCELYLQRVTEVQSYLNSKKVQADPFTQALMAEM
SMLESSKASLIAKYLLPLIQGHIPPAMEIGNCVRQARADIVEPSGESDNVQRFTAGLALA
IDVDATLDNVTQAQDVLIQLKFPDGQTQLTSVRPADIHRLGPLRHRVLTQVYLSHQQWTE
PCHVELGMVLPYSGGDQEDEEEGGAASNVIPLCKPVKVYILPTPTKR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacatctgaaaaaacgagcctacgaagaattcagccacgttattcaggaggag
atcaaacctcctaagaagctcaagcttgccaggaaaccatctccagaagaagtcttggac
ctcagcacagccaagaccccccaggccgctgtccagctgctgttgaagttctcaaacaac
ctgcctgatgagtcaggtgctgtggaaggtgcagtcagacatctgttggagttctggtac
aaggagaaggagtcgtatgtacgtagcaagattgcccagctgttggggagacttgcccac
acgccagggtttgcagcagccgctcttgtggacgacctcacatcgctcttacaggccgaa
gattcccaccaggtgcgagcccagttgctagactccctgctacagatcgggcgtggtctc
cccctacaccaagacctgcacaggaaactggtggccatagcacaacagttcttagcagac
acgtaccatcttgtccgctctaaatgcctggagctgattggctgcctgggtacagcaggg
gttgctgggaagggagacctggcagtagagaggatcctggcggatgcgtcacatgaccag
gaccccagggtcagaaccagcgcactgcaagcgatgttgaccctacaccagcgagggctg
aagctgagcctaggcgggtaccagcagtcctgtgctgctctgactgatgactacgagggg
gtcagactggctgcagtcaaactcatctgggtctacagtcagctatatccagaaacaatg
atccctgtcccctcctccaatgaggagctgcgtcttgtggatgatgggtttgcaaagatc
tgtaacatggtgaatgacctgactatgacagtgagagcagaggccgctggactactgggt
tcactacacagagtcagtgctcggttcctggaacagactctggacaaaaagctcatgtct
catcttaggaggaaaagaacagctcacgagcgagcgaaggaaatgtacgcgcgcggggag
tggtccacggggaagaaatggggagacgacgccccaaaggaagagctggacacggactcc
atcagtttgattgacagcggagcctgcggggccttcgttcatggcttagaggacgagttc
ttagaggttcgcagtgcgtctgttgactccctttgcgaacttgcctccaacaacccgacc
tttgctcagcagagcctggacttcctggtggacatgtttaacgatgagatcgagggcgtg
agactcaactccatccgctccctgcgcaagatctgtcgccatgtcgtgttacgggaggac
cagttggatacagttttgggagcactcgatgatgcgtctaaaccaatccgtgaggccctt
cacgagttgctgtgcagttgtcagcagctgtccaaggcctgtctgaacagcaccatccac
gccatgctgcgtaacctcagcaagtacccttcagacaggctgtctatatggaggtgcatg
cagcaggtgggcagccatcatgctgaccttgtggcgaccttgacccctgaactcctgtgt
gcacacccgtacttcgatgccacagaacctgacatggatgatccagcatacatagctatc
ctgatcctggtgtttaacgcagcagtgtcctgccccaccctacagcccatgttcccagaa
cacacactcaggcactacgactaccttagagacagcctgacagaactggtgccacaactc
aagttggaaggccatcgttccctgatgatgagtcctgagcgacagcggcgcccgagcctg
gacgaccacgggagtttcctgcagcacatcctgagccgcctgggggcactgccgaacatg
cagcatactgcagctgtgggacttctgcagatgacaataagagacttggaaagagtgggg
agtttagagccccaactcgctgctacggctgcctgcactgccatgtacctacactgtcac
atgctgttccgcaaggcactgtcagaccagctgtgggccatgcctgcagcactaggtgca
gtacagtgtgcgacagtcagggcatcagtcagacagatgttggagttgacccatcagatg
gagcagttgttcctgggtctgagttcagaagaggtggggtgtgtcctgcagatgagactg
aaggctcacacactacagctgctggtggacttacgggggagacaagcaggagctaaaggg
actaagacctcctcacagctgtgtgagttgtatctgcagagagtgactgaagtacagagt
tatctgaacagtaagaaggtgcaagcagaccccttcacacaggccctgatggctgagatg
tccatgttagagtccagtaaagcctccctcattgcaaagtacctcctaccactcattcag
ggtcatatccccccagctatggagatagggaactgtgtgcggcaggcgcgagcagacatc
gtagagccgtccggagagtccgataacgtccagcggttcaccgccgggctggcactggcg
atagatgtggacgccacactggataatgtgactcaggcacaagatgtgctcatacaactg
aagttcccagatggccagacccagctcaccagtgtgagacctgccgacatccacagactg
ggtcccctccgtcaccgcgtgctgacacaagtttacctgtctcaccaacaatggacagag
ccatgccatgtggagctgggaatggtactgccctactctgggggagaccaagaggacgag
gaggaggggggagcagcatccaatgtgatccctctctgtaaacctgtcaaagtttatatc
ctacccacccccaccaagagatga
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