KEGG   Branchiostoma floridae (Florida lancelet): 118429842
Entry
118429842         CDS       T01074                                 
Name
(RefSeq) actin-5-like isoform X1
  KO
K05692  actin beta/gamma 1
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082  ATP-dependent chromatin remodeling
bfo04145  Phagosome
bfo04814  Motor proteins
bfo04820  Cytoskeleton in muscle cells
bfo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118429842
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118429842
  09142 Cell motility
   04814 Motor proteins
    118429842
   04820 Cytoskeleton in muscle cells
    118429842
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    118429842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118429842
   03019 Messenger RNA biogenesis [BR:bfo03019]
    118429842
   03036 Chromosome and associated proteins [BR:bfo03036]
    118429842
   03029 Mitochondrial biogenesis [BR:bfo03029]
    118429842
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bfo04812]
    118429842
   04147 Exosome [BR:bfo04147]
    118429842
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118429842
Messenger RNA biogenesis [BR:bfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     118429842
Chromosome and associated proteins [BR:bfo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     118429842
    NuA4 complex
     118429842
  Chromatin remodeling factors
   BAF complex
    118429842
   PBAF complex
    118429842
   GBAF(ncBAF) complex
    118429842
   SWR1 complex
    118429842
Mitochondrial biogenesis [BR:bfo03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    118429842
Cytoskeleton proteins [BR:bfo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     118429842
Exosome [BR:bfo04147]
 Exosomal proteins
  Proteins found in most exosomes
   118429842
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 118429842
NCBI-ProteinID: XP_035696347
UniProt: A0A9J7N7R5
LinkDB
Position
14:13514978..13530254
AA seq 405 aa
MGAQGCLPPQMGRPYPYLCQQVRSMRVTSEEEGVALVIDNGSGMCKAGFAGDNAPRAVFP
AVVGSPRHEGIMLGMGAKDAYVGDEAQSKRGVLSLRYPMEHGIVTNWDDMERVWHHAFYN
EMRMAPEEHPLLVTEAPINPKVNRERMTITMFETFNVPALYVSIQAVLSLYASGRTSGIV
LDCGDGVSHCVPIFEGYSLPHSIMRLNLAGRDITHYLMKLLTERGYSFVTSAEREIVRDL
KEKTCFVSMNFEEEMMRIAMNTEQMYKRTFELPDGQKVTIGSERFRAPEALFQPSFLGME
CCGIHETTYFSIMRCDLDIRRDLYANLVLSGGSTMFPGVTDRMQKEILYLAPPAMKIKTV
SPPERKYSVWIGGSILASLHSFQQMWIRKFDYDEYGPTIVHRKCF
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgggagcacagggctgtctgcccccgcagatggggcgcccgtacccctatctttgtcag
caggtaagaagtatgagggtgacgtcagaagaggagggtgtggccctcgtgatcgacaat
gggtccgggatgtgtaaggcagggtttgcgggggataacgcgcccagggccgtgttccct
gcagtggtcggctctccgagacacgagggaattatgttaggtatgggggccaaagacgcg
tacgtgggtgacgaggctcagagcaagaggggggtgttgtccctgagatatcccatggag
cacggcatcgtcaccaactgggacgatatggagagggtgtggcatcacgccttctacaat
gagatgcggatggcccccgaggagcaccctctgctggtgaccgaggcacccatcaaccct
aaagtcaacagagagaggatgacaataacgatgttcgagacgtttaacgtgccggccctg
tacgtgtccatccaagccgtgctgtccctgtacgcctccggccggacctctgggatcgtg
cttgactgcggggacggcgtgtcccactgtgtccccatcttcgaggggtactccctgccg
cactccatcatgaggctgaacctggcgggaagagacatcacccattacctgatgaagctg
ctgacagagagggggtactcattcgtcacctcagccgagagagagatcgtgagagatctg
aaggagaagacgtgttttgtttccatgaattttgaggaagagatgatgaggatagccatg
aacacagagcagatgtacaagaggacctttgaacttccggacggacagaaggtcaccatc
ggcagcgagcgcttcagggcgcccgaggcgctcttccaaccatccttcctcggtatggag
tgctgcggtatccacgagaccacgtacttcagcatcatgcgctgtgaccttgacatccgt
cgtgacctctacgccaacctggtgctctcgggagggtccactatgttcccgggggtgaca
gaccgtatgcagaaggagatcctgtaccttgcccctcccgccatgaagatcaaaaccgtc
agtccgccggaaaggaagtactccgtttggataggtggttccattttggcgtcgctccac
tcttttcaacaaatgtggatcagaaagtttgactacgatgaatacggacccaccattgtt
cacaggaaatgtttctaa

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