Branchiostoma floridae (Florida lancelet): 118432310
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Entry
118432310 CDS
T01074
Name
(RefSeq) guanine nucleotide exchange C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118432310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118432310
Membrane trafficking [BR:
bfo04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118432310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
YbjQ_2
Motif
Other DBs
NCBI-GeneID:
118432310
NCBI-ProteinID:
XP_035699743
UniProt:
A0A9J7MF41
LinkDB
All DBs
Position
15:complement(15717734..15728992)
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AA seq
463 aa
AA seq
DB search
MSSPESGHKSPEDSLSPLSPLPPESDIPDTQNSNIQAIVLSVWDNILGPRTQHVWRTQCQ
EPLPSGIVPYISNHTLSGEICRCGEEETAGTVDSKFYILPDKNIISSSFIFTGRAKAGRS
VYALSVILPSSKLKAYLPWHDLCEARLTKIIMQLQLNLEKNLSDGDVLTCLSASLRQFVQ
LILSLQRDSLNPSMDLSESVFASGKERMVEEGFLRRAIISHLQTLGCSVVYGKSDKIINK
VIHTLAAFLSPTERQRSRVCVKSATPHQYEADLFLQGIIEDKKSAGLDLPMFDVLTSRYP
TSLINLTNAEVRQTPPFHVHSAQRHEILTLQMYTDGEENPLPDMSVFELVDTDESFVQTF
LAEVFQLHPSCGVREAYIENFCRMLERKALALIKYLETETERGQQPLKISSLKRIRNDLS
LKLEGDFCTVLAVAEKMKAGVYNFWYHSAMHSTEQLRDTLVSL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccagagtcaggccataagtcccccgaggatagcctctctcccctgagcccc
ctgcccccagagtcggacatccccgacacccagaactccaacatccaggctatcgtactc
tccgtctgggacaacatactcggacccagaacgcaacacgtgtggcgtacgcagtgccag
gaaccgctaccctccggtatcgtaccgtacatctccaaccacacgctgtccggcgagatc
tgtcgttgcggcgaagaagaaaccgcgggaacagtagactcgaaattctacatcctccca
gacaagaacatcatctccagttcttttatctttaccggaagggcgaaggcgggaaggagt
gtgtacgcgttgtccgttatattgccatcttccaagttgaaagcgtaccttccgtggcat
gacctatgtgaagccaggctgactaagatcatcatgcaacttcagcttaacctagaaaaa
aatctgagtgatggtgacgttctaacgtgcctgtccgccagtctacgacagttcgtccag
ctcatcttgtctctacagagggactctctcaacccttctatggatttatccgagtctgtg
tttgcatcaggcaaagaaaggatggtagaggagggtttccttagaagggccatcatatcc
catctccaaacactgggctgctcagtggtgtatggcaagtctgacaaaatcatcaacaag
gtgatccacacccttgcggctttcctgagtcccacagaaagacagagatcccgtgtctgt
gtaaaaagtgcaactccacaccagtatgaagctgatctctttctacaaggaatcatagag
gacaagaaaagtgctggactggacctgcccatgtttgatgtgttaaccagtcgctacccg
acctccctaattaacctcactaacgctgaggttcgacagacgccgccatttcacgtacat
tccgcccaacgccacgagatcctcacgttacagatgtacacagatggcgaggagaatccg
ctgccagacatgagtgtatttgagcttgtggatacagatgagtcctttgttcaaacattt
ctggcagaggtgttccagctccacccatcctgtggcgtacgtgaggcgtacatcgagaac
ttctgtcgtatgttggagcgaaaggccctcgccctcatcaagtacctggaaacagagacg
gagagagggcagcagcctctgaagatttccagtctgaagaggatcaggaacgacctgtca
ctcaaactggagggcgacttctgtacggtcctcgccgtggccgagaaaatgaaggccgga
gtctacaacttctggtaccactcagctatgcacagtaccgaacaactcagagacactctt
gtcagtctatga
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