Brevundimonas fontaquae: JX001_00380
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Entry
JX001_00380 CDS
T09174
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bfq
Brevundimonas fontaquae
Pathway
bfq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JX001_00380 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfq03400
]
JX001_00380 (nth)
Enzymes [BR:
bfq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JX001_00380 (nth)
DNA repair and recombination proteins [BR:
bfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JX001_00380 (nth)
Prokaryotic type
JX001_00380 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
IMS_HHH
RecR_HhH
Ogg-HhH
HHH_5
H2TH_5
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
QSF54331
LinkDB
All DBs
Position
77806..78549
Genome browser
AA seq
247 aa
AA seq
DB search
MKPAKAKKSAAKPARRPAVMTGAAIPVLRWPPDEDRVEAIFQRLSGVMPEPKTELDFSNP
FTLVVAVALSAQATDVSVNKATERLFKVADTPEKMLALGEEGLIPYIASIGLYRGKARNV
IALSHIVLEQHGGEVPLNRADLQALPGVGRKTASVVLNELGIEAAIAVDTHVFRVSHRLG
LANAGTPDKVEAQLFEVVPEDWLPKAHHWLILHGRYTCTARKPKCLSCIIADLCPSRAGL
MALGEGV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccaaggccaaaaagtccgccgccaagcctgccagacgcccggccgtgatg
accggggcggccatccccgtgctgcgctggccgcccgacgaagaccgcgtcgaggcgatc
ttccagcgcctgtccggcgtgatgccggagcccaagaccgagctggatttctccaatccc
ttcaccctggttgtcgccgtcgccctgtcggcccaggccacggacgtgtcggtcaacaag
gcgaccgagcggctgttcaaggtcgcggacacgccggagaagatgctggccttgggtgag
gaagggctgatcccctacatcgcgtccatcggcctttatcgcggcaaggcgaggaacgtc
atcgcgctgagccacatcgtgctggaacagcatggcggcgaggtcccgctgaaccgcgcc
gatcttcaggccctgcccggcgtgggtcgaaagacggcctcggtggtcctgaacgagctc
gggatcgaggcggccatcgccgtggacacccacgtctttcgcgtctcgcaccggttgggc
ctggccaatgcgggcacaccggacaaggtcgaggcccagctgttcgaggtcgtgccggag
gactggctgcccaaggcgcaccactggctgatcctgcacgggcgctacacctgcacggcg
cgaaagcccaaatgtctgtcctgcatcatcgccgacctgtgcccgtcgcgagcgggcctg
atggcgctgggcgagggcgtctaa
DBGET
integrated database retrieval system
