Brachyistius frenatus (kelp perch): 138618318
Help
Entry
138618318 CDS
T10614
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04512
ECM-receptor interaction
bfre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138618318 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138618318 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfre00535
]
138618318 (agrn)
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
138618318 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
NtA
SEA
EGF_laminin
Kazal_CFAI
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
138618318
NCBI-ProteinID:
XP_069550089
LinkDB
All DBs
Position
Unknown
AA seq
2111 aa
AA seq
DB search
MGSQRTLQAGRRALLLAGLLVALWQQCAASCPEKDLEDREEEANIVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKTDVNHEILLDGGNKVMIGGFGNPGICDNQVATGDTRIFFLNLP
LDSMGPEHKNELMLNSSLMRITLRNLEDVEHCVEAHKYIVADKPPHFTPAQPPDGCRGML
CGFGAVCERDPTDPAKAECVCKRVDCPSLVAPVCGSDSSTYSNECELEKAQCNTQRRIKV
LRKGPCSLKDPCSDVTCSYGSTCVQSSDGLSAKCMCPLGCEGKQEQTVCGSDGKDYRNEC
ELHQHACNTQKNIRVQYQGHCDPCKNNENSLNTVCRVEALTRQPQAFSPPGSCPPGNEPL
CASDGRTYTSECAMLSTGFQKGIKLRKIHAGKCRRLEECKEECFFNAVCVVEQLNTRCSC
DPIECEGTYKPECGKDGHTYTNDCMRRKTECLTKALIPIKHPGPCDLNVPSPCLDKVCDH
GAVCVVKNDEPVCECPEACPQTSDPVCGSDGHSYGSPCEMRAMGCALQRAIHIQHKGPCD
EACANCSFGAICDAQSSRCVCPSECVESNQPVCGNDDTTYNSECELHVRACMEQLELRVV
SQGECKTCGNTVCAWGARCVQNKCECIYCTGEPFSPVCGSDGSTYVNECELRVSSCMQKR
RIDVAKPGSCDEDCGSGGSGSGVESCEQDRCRMFGGSWDEDAEDDRCVCDFTCQSVPHNP
VCGSDGKKYSNECELKKARCERQEHLLIHNQGPCEAVSAGSLPELNAPQHCSLSVYGCCF
DNATAALGVGLAGCPSTCQCNVYGSYKKTCNPATGQCSCKPGVGGQKCDRCEPGFWNFRG
IVTENMSGCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMGMNGCDKGP
DAPTSCKELVCSFGATCIEVNDQAHCECPSPDCDLKNKTKVCGSDGVTYADQCQLRTIAC
RQDKDITVQHFGQCTETISEPADRPTPNPPATTPSSAAAAAITTTAPFHHNMVWAIPPPK
TTEATEQLPATTPLSTPTPTRAQPNHNGLWSIHTQPQPTAATTAASSSRSSPTPSAAASS
FEGSGSGDTSGDDQAEEEEEQEEEAGSGVPTEASGAEEPVGPTMATTTVPPAEDRSSCDN
TEFGCCPDGKTPSSTPEGANCPSTMRFSGFLHLDQVEGQEIFYTPEMEDPKSELFGETAR
SIESALNELFRKSEVHKDFMSVRVRNLAPSNSILAFVEAHFKPDTRYTVEDIVEALLKQL
KASRDTSISVKKPEDENIHFTNYGLSSIPIFTTTTTTTTASVTTAAPTTTTTTTTTRPPT
TTRYPTTRRPKGTARKPVWDRRTTTTSAPITTPLPVTTTAMAPATTIAHPRSKPNHKAQK
PCDPHPCLHGGTCEDDGNDFSCKCPAGRGGSVCEKVIKYFIPSFGGQSYLAFQTMSAYHT
VRIAMEFRASEMTGILLYNGQGGKKDFISLALVNGRVELRFNTGSGTGTVVSKVQISQGR
WHQLVVTRNRRNAMLSVDNEPHIEGESPRGTDGLNLDTHLFIGGVPEEMKLDVNERTAVA
TGLVGCIRVLDVNNRVLNLQESGGDSQYGSGVGECGNNPCQPNPCKNAAACQVKEAEMFH
CKCSKGFWGPTCADVHDPCEPNRCHPSAQCQALPEGGYKCECPMGREGRHCEKVAERRGA
YMPLFSGDSYLELKGLHLYGHDLRQKLSMTVVLMANDSNGLIFYNGQKSDGKGDFVSLSL
NEGILEFRYDLGKGPATIRSKEPIQLNVWNTINLERSQRKGEIRVNKKEPVKGEAPKSRK
NTHSDLNLKETLLVGGAPDYSRLARVAALTDGFKGTIQTIILMGTPILREENALRSSNVA
MFQGHPCSQEPCHNGGRCNPQLDTYECVCLSGFSGGHCQNTIYEKSAGETEAVAFDGRTF
IEYHNAVTKSQLTNEIPDPESLENPSDQSEKALLVNKFELSIRTEATQGLVLWSGKGVER
SDYIALAIVDGHVQMMYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVT
GSSPLAATQLDTDGALWLGGLEELAVARRLPKAYSTGFVGCIKDVVVDGVDLHLVEDALN
SPTILQCSAAK
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccagcgcacactccaggccggccggagagcgctgctcctggcggggctgctc
gtggctctgtggcagcaatgcgccgcaagttgcccggagaaagacttggaggacagggag
gaggaggccaacatagttttgaccggcaccgtggacgaaattattaacatggacccggtg
cacaacacctactcctgcaaggtcagagtgtggcgctacttgaaagggaagaccgacgtc
aaccatgaaatcctcctggacggcggcaacaaggtgatgatcggcggcttcggcaacccc
gggatctgtgacaaccaggtggccacgggcgacacgcgtatattctttctcaaccttccc
cttgactccatggggcccgaacacaagaacgaacttatgctcaactcaagcttgatgagg
attaccctgcgcaacctggaggatgtggagcactgcgtggaagctcacaaatatatcgtt
gcagacaaaccacctcacttcacaccagcccagcctcctgatggctgtcgtgggatgctg
tgtggcttcggtgccgtatgtgagcgtgacccgacggacccggccaaggctgagtgtgtt
tgcaagagagtggactgcccatccttggtggcgcctgtttgcggctctgattcctccacc
tactccaatgaatgcgagctggagaaagcccagtgcaacacacagcgacgcatcaaggtg
ctgcgcaagggaccctgctctctgaaggacccctgcagcgatgtgacctgcagctacggc
agcacctgcgtccagtcgtcggacggcttgtcggctaaatgcatgtgtcccctcggctgc
gagggcaagcaggagcagacggtgtgcggcagcgacgggaaggactaccgcaacgagtgc
gagctccatcagcacgcctgcaacacccagaagaacatacgtgtgcaataccaaggacac
tgtgatccgtgcaaaaacaacgagaacagtctgaacacagtgtgccgggtggaggctctg
acccgccagccccaggcctttagtccgccggggtcgtgccccccgggtaacgagcctctg
tgcgccagcgacggcaggacctacaccagcgagtgcgccatgttgtcaacgggtttccag
aaaggcatcaagctcaggaagatccacgcaggaaaatgcagaaggctggaggagtgcaag
gaggagtgcttcttcaacgctgtgtgtgtggtggagcagctgaacacccgctgctcctgc
gatcccatcgagtgcgaaggcacctacaagcccgagtgcggcaaggacggtcacacctac
accaacgactgcatgcgacgcaagaccgagtgtctgaccaaggccctcatccccatcaag
cacccggggccctgtgatctcaacgtgccgagcccctgcttggacaaagtgtgcgatcac
ggggcggtgtgcgtggtgaagaatgacgagccagtgtgcgagtgccccgaggcctgcccg
caaacgtccgaccccgtgtgcggttccgacggccacagctacggcagcccctgcgagatg
cgagcaatgggttgcgccctgcagagggccatccacatccagcacaaaggaccctgcgat
gaggcttgtgccaactgctctttcggggcgatctgcgacgcccagagcagcaggtgtgtg
tgtccgtccgagtgtgtggagtccaaccagcccgtgtgcggaaacgacgacaccacctac
aacagcgagtgtgagctgcatgtgcgggcctgcatggagcagctggagctgcgagtggtc
agccaaggagagtgtaaaacatgcggcaacactgtttgtgcctggggtgcccggtgtgtc
cagaataagtgtgagtgcatatattgcacaggcgagcccttctccccggtgtgtggaagt
gatggcagcacctacgtcaacgagtgtgaactccgcgtgtcctcctgcatgcagaagagg
agaattgatgtggcgaagcccggcagctgtgatgaagactgtggatccggagggtcgggc
tccggggtggagagctgtgaacaggaccgctgtcgcatgttcggaggctcgtgggatgaa
gatgcagaggacgaccgctgcgtctgtgacttcacctgccagagtgtgcctcacaacccg
gtttgtggctcagatggcaaaaagtacagcaacgagtgcgagctgaagaaggccagatgt
gagagacaagagcacttgttgattcacaatcagggaccatgcgaagcggtttcagccgga
tctctgcccgagctgaatgcgccccagcactgcagcctgtccgtgtacggctgctgcttc
gacaatgcgactgctgccctgggagtcggcctggctggatgtcccagtacctgtcagtgt
aacgtctatggctcctacaagaagacgtgtaacccggccaccgggcagtgctcctgtaaa
ccgggcgtaggcgggcagaagtgtgaccgctgtgagccgggcttctggaacttcagaggc
atcgtgacggagaacatgagcggctgcacaccgtgtaactgcgacgccacggggtcagtg
cgggatgattgtgagcagatgtcgggtctgtgctcctgcaagacgggagtgaagggcatg
aagtgcaacgtgtgtccagatggaagcaagatgggcatgaatggctgcgataaaggtccc
gacgccccgacttcatgtaaagagctggtgtgcagcttcggagctacttgcatcgaggtg
aacgaccaagcgcactgcgagtgcccttcaccagactgcgatttaaaaaacaaaacgaag
gtgtgcggctcagatggggtgacctacgccgaccagtgccagctgaggaccatcgcctgt
aggcaggacaaggacatcacagtgcagcactttggacagtgcacagaaaccatctccgag
ccggccgaccgacccacccccaacccccccgccaccacccccagctccgccgccgccgcc
gccatcaccaccaccgcccccttccaccataacatggtgtgggccatcccgccgccgaag
acgaccgaggccaccgagcagctgccggccaccacccctctttccacccccacccccacc
cgcgcacaaccaaaccacaacgggttgtggagtatccacacccagccgcagcccaccgcc
gccaccaccgcagcctcctcctctcgcagcagccccaccccctcagccgccgcatcctcc
tttgagggctcgggcagcggggacacgagcggggacgaccaggccgaggaagaggaggag
caggaagaggaagcgggtagcggcgtcccaacggaggccagtggggcagaggaacctgtt
ggtccaacgatggcgaccaccacagtaccccctgctgaggaccgctcatcctgtgacaac
accgagttcggctgctgccccgatggcaagacaccatccagcactccagagggcgccaat
tgcccctccaccatgaggttcagtgggttcctgcacctcgaccaggtggagggccaggag
atcttctacacgccagagatggaggacccaaagtcagagctgtttggagagacggcccgc
agcatcgagagcgctctcaatgagttgttcaggaagtcggaggtgcacaaagacttcatg
agcgtccgtgtgcgtaacctggcacccagcaactccatcctggcctttgttgaggcccac
ttcaaaccagatacaagatataccgtggaggacatcgtggaagccctgctgaaacagtta
aaggcctcccgagacaccagcatctccgtgaagaagccggaggacgagaatattcacttc
accaattatggcctgtcctccatccccatcttcaccaccacgaccaccaccaccacggcg
tcagtcaccacagccgctcccaccaccaccaccaccaccaccacaaccaggcccccgaca
accacccgctacccgaccacccgccgaccaaaaggcaccgcccgcaagcccgtgtgggac
agacggaccaccacaacctcagcgccaatcaccacgccgctccccgtgacaacaaccgcg
atggctcctgccaccaccatcgcccaccccaggagcaagcctaaccacaaggcccagaag
ccctgcgacccacacccctgcctccacggcggaacctgcgaggatgacggcaacgacttc
agctgcaagtgcccggccggcagaggagggtccgtgtgtgagaaggtgatcaagtacttc
attccatcattcggaggacagtcctacttggccttccaaaccatgagcgcatatcacact
gtccgcattgccatggagttcagagcgtccgagatgaccggcatcttgctctacaacggc
cagggcggcaagaaggacttcatctctctggctctggtcaacggcagggtggagctcagg
ttcaacacaggctcgggtacaggcacagtggtcagcaaagtccaaatcagccagggccgc
tggcatcaactggtggtgactcgcaaccggcgaaacgccatgctcagcgtggacaacgag
ccgcacatcgaaggcgagagtccgcggggaacagacggcctcaacctggacacccacctg
ttcatcggaggagtgcctgaggaaatgaagcttgatgtaaatgaaaggacggcggtggcc
acaggtctggtgggctgcatccgcgtgctggacgtcaacaaccgggtgctcaacctgcag
gagagcggcggcgacagtcagtacggcagcggcgtgggtgaatgtggaaacaacccctgc
cagccgaacccgtgcaagaacgccgccgcgtgccaggtcaaggaggcggagatgttccac
tgcaagtgtagcaaaggattctggggtccaacctgtgccgacgtccacgacccatgcgaa
cccaacaggtgccatccatccgcccagtgccaggcgctgcccgagggaggctacaaatgc
gagtgtcccatgggacgtgaagggaggcactgcgagaaagtggctgagcggagaggggct
tacatgccactcttcagcggagactcttacctggagctgaaagggctccatctctacggt
catgatctgcgtcaaaagctcagcatgacggtggtcctcatggccaacgactccaacggt
ttgatcttctacaacggacaaaaatcggacgggaaaggcgactttgtctctctgtccctg
aacgaggggatcctggagtttcgctacgacctgggaaagggaccggccaccatcaggagt
aaggaaccaatccagctgaacgtgtggaacaccatcaacctggagcgctcccagcgcaaa
ggagagatcagagtgaacaagaaggagcccgtcaaaggagaggcaccaaaatcacgcaag
aacacgcactccgatctcaacctgaaagagactcttctcgtcggcggggctcccgattac
agccgactggcaagagtcgctgctctcacagatggcttcaagggaacaatccaaacgatc
attctgatgggcacgcccatcctcagggaagagaacgccttgcgctccagtaacgtggcc
atgttccagggccacccgtgctcccaggagccctgccacaacggcggccgctgcaacccg
cagctcgacacctacgagtgtgtttgcctcagtggtttctcagggggacactgtcagaac
accatctacgagaagtccgccggagagaccgaggccgtcgccttcgacggtcggacgttc
atcgagtaccacaacgccgttacgaagagccaactgaccaatgagatcccagatcccgaa
tctctggagaacccgtctgaccagagtgagaaggctctgctggtgaacaagttcgagctg
agcatccggactgaggcgacccagggcctggtgctgtggagcgggaagggagtggagcgc
tccgactacatcgccctggccatcgtggacggacatgtccagatgatgtacgacctgggc
tccaagccggtggtgctgcgctcatcggtgcgcgtcgacaccaaccgctggatacgcatc
aaggccagcagagcacttcgagacggctctctacaggttggcaacgaggcagcagtaaca
gggtcatcgcctttggcagccacgcagctggacacagacggagcgctctggttgggtggt
ctggaggagctggcagtggcgcgacggttgcccaaggcctacagcaccggcttcgttggc
tgcatcaaagatgtggtggtggacggcgtggacctccacctggtggaggacgccttgaac
agccccacaatattacagtgttccgccgctaaataa
DBGET
integrated database retrieval system