Brachyistius frenatus (kelp perch): 138619151
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Entry
138619151 CDS
T10614
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138619151 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138619151 (tdg.2)
Enzymes [BR:
bfre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
138619151 (tdg.2)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
138619151 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
138619151
NCBI-ProteinID:
XP_069551527
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MYSNKSTVKMEEKQFTSLTVPTDYFQQWYQSSQQHPEAQHVMPYHNMGYYTDGPTDEPVM
AELSVHRDPPPYQEPFYQNYPVAPNHYQEQFYQHSVREQQHHAQQPYPALLHHPQHQHAI
QQQQQQQPNIQHQLQPPGPPQAVTPVKKKRGRPPKQQAEDGETQEEEDEVEAAKKAKRAL
NRFNGMSVAEVMAKTLPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGL
TDQQLNFMDDQGLPETYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLKKYRPLIAA
FNGKGIYEIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHF
YIKLKELRDQMKGQVPKHEVVETQYSFDMQLAKEDAKRMAIKEEQVDPEYESCSGLHDNT
KQSSNSSN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaaataagtcaacagttaagatggaggaaaagcagtttacatcactgacggtt
cctacggattatttccagcagtggtaccagtccagccaacagcaccctgaggcgcagcat
gtgatgccctatcacaacatgggctattacaccgacggtcctacagatgagccagtcatg
gccgagctgtctgttcatcgggatccacctccttaccaggaacctttttaccagaactac
cctgtagccccaaaccactaccaggagcagttctaccagcacagcgtcagggagcagcag
catcacgcccagcagccgtatcctgcacttctgcaccatcctcagcatcagcatgcaata
cagcagcagcagcagcagcagccgaatatccagcaccagcttcagcctcctggtccacct
caagctgtaacgccagtgaagaagaagagaggccggccaccgaaacagcaggcggaggac
ggcgagacgcaggaggaggaggatgaggtcgaagctgccaaaaaagccaagagggctctc
aaccgctttaacggcatgtcagtggctgaagttatggccaaaaccctgccagatgtcatt
acctacaatcttgacattttgattattggaattaacccaggactattgtcagccttcaaa
ggacaccattacccaaacccaggaaaccatttctggaaatgtctgtttctgtctggtcta
actgaccagcagctcaacttcatggatgaccagggcttgccagagacatacagcatcggc
ttcaccaatatggtggaaaggaccacacctggcagcaaggacctctccagtaaggagatt
cgtgaagggggccgtcaattactcgacaagctgaagaaatacaggccattaatagcagct
tttaatggaaaaggcatttatgaaatcttttgcaaagaaacctttggggtgaaggccaag
aatctggagtttggtctgcagccctacaaaatcccagaaaccgaaacagtgtgctatcta
atgccgtcctcaagccctcgctgtgcccagtttccccgtgcacaggataaggtacatttc
tacatcaagctgaaggagctgcgagaccagatgaaaggccaggtgcccaaacacgaggtg
gttgagacgcagtactctttcgacatgcagctcgctaaagaggacgccaagaggatggcg
atcaaagaagagcaggtggatccggagtatgaaagctgcagcggactgcatgacaacacg
aagcaaagcagcaactcctccaactga
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