KEGG   Brachyistius frenatus (kelp perch): 138622481
Entry
138622481         CDS       T10614                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03420  Nucleotide excision repair
bfre04110  Cell cycle
bfre04114  Oocyte meiosis
bfre04120  Ubiquitin mediated proteolysis
bfre04141  Protein processing in endoplasmic reticulum
bfre04310  Wnt signaling pathway
bfre04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    138622481 (rbx1)
   04120 Ubiquitin mediated proteolysis
    138622481 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    138622481 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    138622481 (rbx1)
   04350 TGF-beta signaling pathway
    138622481 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    138622481 (rbx1)
   04114 Oocyte meiosis
    138622481 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bfre04121]
    138622481 (rbx1)
   03400 DNA repair and recombination proteins [BR:bfre03400]
    138622481 (rbx1)
Enzymes [BR:bfre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     138622481 (rbx1)
Ubiquitin system [BR:bfre04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   138622481 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     138622481 (rbx1)
   Cul2 complex
     138622481 (rbx1)
   Cul3 complex
     138622481 (rbx1)
   Cul4 complex
     138622481 (rbx1)
   Cul7 complex
     138622481 (rbx1)
   Cul8 complex
     138622481 (rbx1)
   Cul9 complex
     138622481 (rbx1)
DNA repair and recombination proteins [BR:bfre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      138622481 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      138622481 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 138622481
NCBI-ProteinID: XP_069557413
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggacgtagatacgccgagcggcaccaacagcggagcaagcaagaag
cggtttgaagtgaagaagtggaacgccgtggctctgtgggcctgggacatcgtggtggac
aactgtgctatctgtaggaaccacatcatggatctctgcatagagtgccaggccaaccag
gcttctgcaacctctgaggagtgcactgtagcctggggagtttgcaatcacgctttccac
tttcactgtatttctcgctggctgaagaccagacaggtttgtcctctggacaacagagag
tgggagtttcagaagtacggacactag

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