Brachyistius frenatus (kelp perch): 138624425
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Entry
138624425 CDS
T10614
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138624425 (scn4aa)
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138624425 (scn4aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
DUF1492
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
138624425
NCBI-ProteinID:
XP_069560724
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTVEATVKVLSRGFCVGSFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVM
ILTVFALAVFALVGLQLFMGNLRQKCVRWPIQSNETMFEFLNITSTFNDTASFNDTTYVN
STFDFNEYIENTDNHYYLEGSLDALLCGNSSDAGKCPEGYTCMKAGRNPNYGYTSFDSFG
WAFLALFRLMTQDYWENVFQLILRAAGKTYMLFFVVVIFLGSFYLINLILAVVAMAYDEQ
NEATRREAIEKEEEFQRLLEQLKNQERQAHALGSQATLTSKKSLSRHTGSELADDERSLE
PYEPVKDCNGRLVPRLVIRSPTMDKSAADYELREMSLGSVHSRLHPDGPGLTHRSVSAVT
VLTVAALEELEEGQRPCPPLWYKFADRFLKWDCCVQWIVFKKWVLFVVMDPFVDLGITIC
IVLNTLFMAMEHYPMTPEFDYMLSVGNLVFTGIFTAEMFFKLIAMDPYYYFQVGWNIFDS
IIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKISLDCELPRWHMNDFFHSFLIVFRILCGEWIETMW
DCMEVAGTGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSTGDEDGEMNNLQIAIG
RITRGIDWLKAFIVQTVLQILNRKPKEPDEGAADDADDPKTEGIEMNHLDAGRTFKLADG
TAGCLVEGRPSGFTVDGELGLDVPIAQGESDFENLGDDEDDAEDTHDSEVLDEKSNQQDT
ENLEDENTLAENIHMGALDDGDSSVCSTVDYQPAEPEPEVVEEEEPDPVEPEAWFTDNCI
KRWPRLTVDITDGRGKQWWNLRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRR
TIKIILEFADKIFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISLISLVANWMGY
SDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGV
NLFAGKFYRCINTTTEELFPLTEVNNHSDCMAIKEATQEARWVNVKVNYDNVGLGYLSLF
QVATFKGWMDIMYAAVDSREVDEQPSYEINLYMYMYFVIFIIFGSFFTLNLFIGVIIDNF
NQQKKKFGDKDLFMTEEQKKYYDAMKKLGSKKPQKPIPRPTNLIQGLVFDFISQQFFDIF
IMVLICLNMVSMMVETDNQSAEKEDLLFKVNVTFIIVFTGECVLKLFALRQYFFTNGWNV
FDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRIIKGAKGIRTLLFALMMS
LPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDMFNFETFGGSIVCLFEITTSAGW
DALLLPMLNREPPDCDPNFENPGTDVRGNCGNPGMGMMFFCGYIIVSFLVVVNMYIAIIL
ENFNVAQEESGDALCEDDFEMFNETWEKFDLDGTQFIEYSRLSDFCDALQEPLRIAKPNR
FRLIEMNLPLVIGDRIHCLDVLLAVTQIVLGDTVEMAAMRLSIEAKFILSNPTSDSFAPI
TTTVRHKEEQAAAVVIQRAYRRRLLKRCVRHAAFMRRSKRMDRKDEGEEPPEREGLLARK
LGVLYGSNVDLAEEMERAAFETQASQQPLNQETLSHYREAQCGPETSEPNIIIVPVEITN
EVLLHSAPNRHFFTLPANLRESIV
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgattacgattctgtcgaattgtgttttcatgacgatgagcaacccacca
gcatggagtaaaaccgttgagtatgtttttactggtatttacaccgtcgaggcaacagtc
aaagtgttgtccagaggtttctgtgttgggtcttttacattccttcgagatccatggaat
tggctggatttcatggtgatcagcatggcatacgtcactgagttcgttgacctcggcaat
gtgtctgccctgcggacgtttcgtgtacttcgagcccttaaaacaattactgtgattcct
ggtttgaaaacgattgtggccgctttgatccagtcggtgaagaaaatggtggacgtcatg
attctgaccgtttttgcgctcgcggttttcgccctcgtcggccttcagctcttcatggga
aacctgcgtcagaaatgtgtgcgatggcccatccaatcaaacgagactatgtttgagttt
ttaaacatcacctccacattcaatgacacggcgtccttcaacgatacgacttatgtgaac
agtaccttcgatttcaatgaatacattgagaacacagacaatcactattatttagaaggc
agtttagacgctctcctttgtggaaacagctctgatgctggaaagtgcccagaaggatac
acgtgcatgaaggctgggaggaacccgaactacggctacaccagctttgactcttttggc
tgggccttcctcgccctcttcagactcatgacccaggactactgggagaacgttttccag
ctgatcctgcgggcggctggtaagacatacatgcttttctttgtggtggttatctttctg
ggctccttctacctcatcaacctcatcctggcagtggtcgccatggcttacgatgaacag
aatgaggcaacccggcgagaggccatcgaaaaggaggaggagttccagcggctgctagag
caactcaagaaccaagaacggcaggctcatgctcttggtagccaagccactctcaccagt
aagaagtcgctcagtcgtcacactggctctgagttggcagatgatgaacggagccttgaa
ccttacgaacctgtcaaggattgtaacgggagacttgttccccgtctggtgatcagatcg
cccaccatggacaagtctgctgcagattacgaactcagagagatgtcactgggctcggtg
cacagcaggcttcacccggacggaccgggcctgacacacaggtctgtgagtgctgtgact
gtgctcacggtagctgcgttggaagagttggaggagggtcaaaggccttgtccacctctc
tggtacaagtttgccgacaggttccttaagtgggactgctgtgtgcaatggatagtcttt
aaaaagtgggtcctctttgtggtcatggaccctttcgttgacttgggtatcaccatctgc
atcgtgctcaacaccctcttcatggccatggagcactaccccatgaccccggagtttgac
tacatgctctcagtggggaatctggttttcaccgggatcttcacagcggaaatgttcttc
aagctcatcgccatggatccctactactacttccaagttggctggaacattttcgacagc
atcattgtcactctcagtttggtggagttggggctggcgaacgtccaggggctgtccgtc
ctcaggtccttccgtctgcttcgtgtcttcaaactggccaagtcctggcccacgctcaac
atgctgatcaagatcatcggcaactctgtaggagctttgggaaacctgacgttggtgctg
gccatcatcgtcttcatctttgccgtcgtgggcatgcagctctttgggaagagctacaag
gaatgcgtgtgcaagatctccttggactgcgagctgccgcgctggcacatgaacgacttc
ttccactcgttcctcatcgtgttccgcatcctgtgcggggagtggatcgagaccatgtgg
gactgcatggaggtggccggaactgggatgtgcttggttgtcttcatgatggtgatggtc
attggaaatctagtggtgttgaacctcttcttggccttgctgctcagctcgttcagcgga
gacaacctctccaccggagacgaggacggagagatgaacaacctccagattgccatcggc
aggatcacgcgcggcatcgactggttgaaagccttcatcgttcagaccgtcctgcagatt
ctcaacagaaagcccaaggagcctgacgagggcgccgcggacgacgccgacgacccgaaa
acagaaggaatcgaaatgaaccacttggacgccggtcggactttcaaactggcggacgga
acagcgggctgcctcgttgaaggaaggccttctggattcactgtggacggagagctcggt
ctcgatgtgcctatcgcccagggagagtcagactttgaaaatctgggcgatgatgaagat
gatgccgaggatactcatgactcagaggttttagatgagaaaagtaaccaacaggacaca
gaaaacttggaagacgaaaacactttagcagaaaatatccacatgggtgctttggatgac
ggggactcttcagtgtgcagcacagtggactatcagccggccgaacctgaaccagaagta
gtggaagaagaggagcccgacccagtggagccagaggcctggttcactgacaactgcatt
aaacgctggccacgtctgactgtggacatcaccgacggcagaggcaagcaatggtggaac
ctccgaaagacttgcttcaccattgtggagcacgactggtttgaaaccttcataatcttc
atgatcctcctcagcagtggagctctggcctttgaagacatatacatagaaagacgccga
accatcaaaattattctggagtttgctgacaagattttcacctacatctttgtcatcgag
atgctccttaaatgggtcgcgtacggcttcaagacctacttcaccaacgcttggtgttgg
ttagactttttcattgtagatatttccctgattagtttagttgccaactggatgggttac
tctgacctcggaccgattaagtccctccgaaccctcagagcactgaggcctctccgagcg
ctgtccagatttgaagggatgagggtggtggtgaacgctcttgtcggagcgattccctcc
atcttcaatgtgctgctggtgtgtctgattttctggctcatcttcagcatcatgggagtt
aatttgtttgcggggaagttctaccgctgcatcaacaccaccacggaggagctcttcccc
ctcaccgaggtcaacaaccacagcgactgcatggccatcaaagaggccacacaggaggcc
cgctgggtcaacgtcaaagtcaactatgacaatgtgggattaggctacctgtcccttttt
caagtggcgacttttaaaggttggatggacatcatgtatgctgccgttgactcaagagaa
gttgacgagcaaccttcttatgagatcaacctctacatgtacatgtactttgtcatcttc
atcatatttggttctttcttcaccctcaacctcttcattggtgtcattatcgacaacttc
aaccaacaaaagaaaaagtttggagacaaagacctctttatgactgaggaacaaaaaaaa
tactacgacgccatgaagaaactcggttccaagaagccacagaagccgattccccgtcca
acgaacctaatccagggattggtgtttgactttatcagtcagcagttctttgacatcttc
attatggtgctcatttgcctcaacatggtgtccatgatggtggagacggacaaccaaagt
gccgagaaggaagacttactctttaaagtgaacgtgacgttcatcattgtcttcaccgga
gagtgtgtgttgaagctctttgctctgcggcaatacttcttcaccaacggctggaacgtt
ttcgatttcgtcgtggtcatcttgtcaatcgctggcacaatgctgtcagacctgatcgag
aagtactttgtgtcgccgactcttttcagagtgatccgactggcccggataggcaggatc
ctgcgtattattaaaggagctaaaggcattcgaacgcttctctttgctctcatgatgtca
cttcctgccctgttcaacatcggtctcctgctcttcctcatcatgttcatcttctccata
tttggcatgtcgaacttcgcctacgtcaaaaaggaggctgggatcgacgacatgtttaac
ttcgagacgtttggcggcagcatcgtctgcttgtttgagatcacgacgtcggcgggctgg
gatgcacttctgctgccgatgctgaacagggagcctccggactgcgatccgaacttcgag
aacccgggcacggacgtaaggggtaactgcggtaacccgggcatgggcatgatgttcttc
tgtggctacatcatcgtctcgttcttggtggtggtcaacatgtacattgccatcatcttg
gagaacttcaacgtagcgcaggaggagagcggcgacgcgctgtgcgaggacgacttcgag
atgttcaacgagacctgggagaagtttgacctcgatggaacccagttcatcgagtacagc
cggctctccgatttttgtgacgccctgcaggagccgctgaggatcgccaagcccaaccgc
tttcgcctcattgaaatgaatctgcccctggtcattggagaccggatccactgcctggac
gtgttgttggccgtcacgcagattgtcttgggagacacggtggagatggcggcgatgcgg
ttgagcatcgaggccaagttcatcctgagcaaccccacctcagactccttcgcgccaatt
accacgacggtacgccacaaagaggagcaggcggcggccgtagtcatccagagggcttac
cgccgccgccttctgaagcgctgcgtgcgtcacgcggcttttatgcgccgctcgaagagg
atggacagaaaggacgaaggcgaagagccaccggaaagagaagggctgcttgcgcgaaag
ttgggagtgctctacgggagtaacgtggacctcgcggaggaaatggagcgagccgctttc
gaaactcaagcaagccaacagccccttaatcaggagacgctgtcacattacagagaggcc
cagtgtggtccagaaacctctgagcccaacatcatcatcgtacctgtagaaattactaat
gaggttttattacattctgccccgaacagacatttcttcactctaccagcaaacctgaga
gagtctattgtataa
DBGET
integrated database retrieval system
