Brachyistius frenatus (kelp perch): 138624874 Help Entry 138624874         CDS       T10614                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism bfre  Brachyistius frenatus (kelp perch) Pathway bfre04010   MAPK signaling pathway bfre04120   Ubiquitin mediated proteolysis bfre04140   Autophagy - animal bfre04144   Endocytosis bfre04620   Toll-like receptor signaling pathway bfre04621   NOD-like receptor signaling pathway bfre04622   RIG-I-like receptor signaling pathway bfre05132   Salmonella infection bfre05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:bfre00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     138624874 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     138624874 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     138624874 (traf6)    04140 Autophagy - animal     138624874 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     138624874 (traf6)    04621 NOD-like receptor signaling pathway     138624874 (traf6)    04622 RIG-I-like receptor signaling pathway     138624874 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     138624874 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     138624874 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bfre04131]     138624874 (traf6)    04121 Ubiquitin system [BR:bfre04121]     138624874 (traf6) Enzymes [BR:bfre01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      138624874 (traf6) Membrane trafficking [BR:bfre04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     138624874 (traf6) Ubiquitin system [BR:bfre04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     138624874 (traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 TRAF6_Z2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 SlyX zf-TRAF_2 Motif Other DBs NCBI-GeneID:  138624874 NCBI-ProteinID:  XP_069561545 LinkDB All DBs Position Unknown AA seq 579 aa AA seqDB search MRTCCSLPARLMACCESTKGSLEEDSYKGAVGGELSGCALAMLEKERESLLSPSESPGTL TSLLGDAPLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQR CPVDNEMLSEDQLFPDNFAKREILSLTVRCPNSDCVEKMELRHLENHLAQCKYATVACLQ CQQPVKKTQLEEHITVECQRRPVSCPDCVACFVYEERELHQQQCPFANVMCQYCELDLIR DQMESHCDTDCPKAPIACTFSIFGCKEKMQRHNLAQHMQEFTQMHMCYMAEFLRGLGPNG TAPRSLWTPPGPPVSSEDLGASASACGGARGAAGGGGGGGSGGSCAPCQPSVEMQRLGDM DIRLVKQDHKLIELIILKETQTEQLAELRRRVSMLEDTVKELEAQQCHGIFIWRLRGFSA HLRNQEAGLPVVEHSPGFYTGRPGYRLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGQL TWPFQGTIRLAILDQGPEGQHHVEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLNQLSQ RAFVKDDTLLIRCEVTPRFDSTLHREGPTVQRRGPEASV NT seq 1740 nt NT seq  +upstreamnt  +downstreamnt atgaggacgtgttgttcgcttcctgctcgtttgatggcttgctgtgaaagcaccaagggg agtctggaggaggacagctataaaggagccgtcggtggagagctgtccggctgcgccttg gcgatgctggaaaaggagcgggaatccctcctgagcccctcggagagccccgggaccctc accagtctcttgggcgatgcccctcttcagggctacgacgtggagtttgaccccccgctg gagagcaaatacgagtgccccatctgcctcatggctctgaggaacgccatccaaacgcgc tgcggccaccgcttctgcaagagctgcatcgagaagtccatacgcgacacgggacagagg tgccccgtggacaacgagatgctgtcagaagaccagctgtttcccgataacttcgccaaa agggagatcctgtcgctgaccgttcgctgcccgaactctgactgcgtcgagaaaatggag ctccgacatttagagaatcatttggcgcagtgcaagtacgccaccgtggcgtgtctgcag tgccagcagccggtgaaaaagacccaactcgaggagcacataaccgtcgagtgccaaaga cgccccgtgtcctgtccagattgcgtggcgtgctttgtctacgaggagagagagcttcac cagcagcagtgtccgttcgccaacgtgatgtgtcagtactgcgagttggatctgatcaga gaccagatggaatctcattgtgacacagattgtccgaaagcacccatcgcctgtaccttc agcatctttggatgtaaagagaagatgcagcgccacaacctggctcagcacatgcaggag ttcacgcagatgcacatgtgctacatggccgagtttttgcgcggcctcggcccgaacggc accgcgcccaggtcgctgtggacgccgccgggacctcccgtttcctccgaggacctggga gcgtcggcgtcggcctgcggcggggccagaggggccgccggcggcggcggcggcggcggc agcggcggcagctgcgctccgtgtcagcccagcgtggagatgcagcggctcggagacatg gacatacggctggtgaagcaggaccacaagctgatcgagctcatcatcttaaaagaaacg cagacagagcagctagcggagctccggcgtcgggtgtcaatgctggaggacacggtgaag gagctggaggcccagcagtgtcacgggatcttcatctggcgcctcagaggtttctccgcc cacctgcggaaccaggaagcgggcctgccggtggtggagcacagccccggcttctacacg ggccggcccggctacaggctgtgcctgcgcctgcacctgcagacccccaacgccccgcgc tgctccaacttcatctccctcttcgtccacaccatgcaaggggctttcgacgggcagctg acgtggccctttcaagggaccatccggctcgccatcctggaccagggccccgagggccag catcacgtggaggtgatggagaccaagccggacctgcaggccttccagaagcccaccatt cagcgcaaccccaaagggttcggctacgtcaccttcctgcacctgaatcagctgagtcag cgagccttcgtgaaagacgacacgctgctcatccgctgcgaggtgacgccgcgctttgac agtacgcttcaccgcgaggggccgacggtgcagcgcagaggacccgaggcgtcggtttga

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