Brachyistius frenatus (kelp perch): 138631046
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Entry
138631046 CDS
T10614
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04115
p53 signaling pathway
bfre04210
Apoptosis
bfre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138631046 (apaf1)
04115 p53 signaling pathway
138631046 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138631046 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NB-ARC
Beta-prop_EML
CARD
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_Vps41
Beta-prop_ACSF4
CARD_2
Tricorn_2nd
WD40_like
VPS11_N
AAA_18
AAA_16
WHD_Dark
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
138631046
NCBI-ProteinID:
XP_069571860
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MALEERPRSCLLRFRHRLEQDMKPAYLMDHMISDGVMTVDEEEKIRTQPTRKDQAAALLE
LVLRKDNRAYISFYNALVKETYDDLANLLHDDLPHFSLEAQKSSSDSFTSYVQTVLSEGG
VPQRPVVFVSRPKLVNRVREKFYQLQKDPGWVTVFGMAGSGKSILAAEAVRHHGLIEECF
PGGIHWLSIGQLDKPNLLVKIQSLCFRLEQGLDSQPLHRPPTSLDEAKECLRFLMLRKYP
RSLLILDDVWDSMVVKAFDIHCRILLTTRNRSLADSVSGAKYEVGVESGLDEDKALEVLS
LYTNMKLNGLPDEARSIVRECKGSPLVVSLIGALLKEKPTRWQYYLRQLQQKQFKRIRKS
SSYDYDALDQAMAASIEVLPDEHRELYKDLTVLEQDIKIPAKVLSVLWDLEAEEVEDILQ
EFVNKSLLFVDSHNKPYLYYLHDLQLDFLVEQNRTQLQSLHTKVVRQYQQYYRDGPPTTG
DEECLYWIRFLTYHMAKANLSQELYSLMFSLDWVSVKAQVIGPAHLINDYVEYGSILDKE
NCDVRSHFQEFLSLNGHQLEQRPFPDVVQLALSQPHTSEVYRQARLQAQDRASAGGIYFD
LLNQSGVESLSRLVIHPQQGSVYSACFSHDGTKIASCGASKTVKVFRSTSGEKLTETQAH
DDEVLCCAFSPDDHLLATCSSDRKVKVWNADRTRLLRVFNEEHEEQVNHCQFTNTSQRLL
LATCSNDPISNVKLWNLNKPSCQNTMFGHFQPVNHCCFSPDDSYLSTSSNDGTVKLFQVS
SANEWKTIDVRSIFTDSDDDDVLVKCSTWTADGKRIICAARNAVLVFDVETSDMLLEIRT
NRLSTVQHCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSPDGSQL
LSCSDDQTVRLWETKKLHTSSAICLKRDSDVLFNDGEIIVSAADNSNRLQVRDGRTGSVL
FQSEEKSSRIRCTCMCRQPPAVVLGQEDGTVQVLVVPSGKLLATLLGHTKTVLHCQFSQN
GRTLITSSEDTTIRVWRWQSGECKVLQGHKEQVRCFSLLSNSPNDARLLSWSFDGTVKVW
DTESGEKLQDVEAHRGAILSCHVSPDRCLFATTSADKSAKLWHCESWQCIYTLSGHQECV
RSCRFSWDSQRLATGDDNGEIRLWSVTEGSLLKICSRDSKDGMDSLHGGWVTDLHFSPDD
SLLVSTGGYVKWWDVERGEALQTFHPTGSALKKIHVSSDFSTFVTIDNIGILYLLRRVA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggctctggaggaacggccgaggagctgtctgctgcgctttcgccacagactggagcag
gacatgaagccggcctacctgatggaccacatgatcagtgatggtgtgatgactgtggat
gaggaggaaaagatcaggactcagcccaccaggaaggatcaggctgcagccctacttgag
ctcgtgctgaggaaggacaaccgtgcttacatctctttctacaacgctctggtcaaggag
acatatgatgatctggccaatctgctccatgacgacttaccgcacttctcactcgaggca
cagaagagctcctctgatagctttacatcatacgtccagaccgtgctcagtgaaggcgga
gtaccacagaggcccgtggtgttcgtcagcagaccaaagctggtgaaccgggtcagggag
aaattctaccagctccagaaggaccccggctgggtcactgtcttcgggatggctggctcg
gggaagtctatcctggctgctgaggctgtcaggcaccatggactcatcgaagagtgcttt
cctggaggcatccactggctgtccatcggccagctggacaaaccgaacctgctggtgaag
atccagtctctgtgttttcgtctggagcagggcctggattcccagcccctccaccggccc
cccacctctctggatgaggccaaggagtgtctgcgcttcctcatgctgcgcaaatatccc
agatctttgctgattctagatgacgtctgggacagcatggtggtgaaggcgtttgatatc
cactgtcggatccttctgaccaccagaaatagaagcctcgctgattctgtcagcggcgct
aaatatgaggtgggagtggaaagtggtctggatgaagacaaggcgctggaggtcctttct
ctgtacacgaacatgaagcttaatgggctacctgacgaggctcgcagtatcgtccgagaa
tgtaaaggctcccctctggtggtgtccctgatcggcgctctgctcaaagagaaacccacc
cgctggcagtactacctccgccagctgcagcagaagcagttcaagcgcataaggaagtcg
tcatcctacgactacgatgccctggaccaggccatggccgccagtatcgaggtcttacct
gacgagcatcgggagctctacaaggacctgaccgtgctggagcaggacatcaaaatcccg
gccaaggtgctgtctgttctgtgggatctggaggcggaggaggtggaggacatcctccag
gagttcgtcaacaagtctctgctgtttgtggacagtcacaataaaccctacctgtactat
ctccatgacctccagctggacttcctggtggagcagaaccgcacgcagctccagagcctt
cacactaaggtggtgcgtcagtaccagcagtactacagagatggtcctcccaccacagga
gatgaagagtgtctttactggatcagatttttgacctaccacatggccaaagccaacctc
tcccaggagctctactccctcatgttctctctggactgggtcagtgttaaggcccaggta
ataggtccagcccacctcatcaatgactacgtggagtatggatccattctggacaaagag
aactgtgacgtgcgcagtcatttccaggagtttctgtctctgaacggccatcagctggag
cagcgtcctttcccggacgtcgtgcagctcgctctgtctcagccacacacctctgaggtc
tacagacaagcccggctgcaggcgcaggaccgggccagcgccgggggaatctactttgac
ttgctgaaccagagcggtgtggagagtctgtcccgtttggtgatccacccccaacagggc
tccgtctactccgcctgcttctcccatgatggaacaaagatcgcctcttgtggcgcgagc
aagacagtcaaggtgtttagaagtacctcgggtgagaagctcacagagacccaggcccac
gatgacgaagtactgtgctgcgccttctcccctgacgaccatctccttgcaacctgctcc
agtgacaggaaagtcaaggtgtggaatgcagatcgaactaggctgctgagggtcttcaat
gaggagcatgaggagcaggtcaaccactgtcagtttaccaacacatcacagcgcctcctg
ctggccacctgctccaacgacccgatctccaatgtcaagctgtggaacctcaacaagcct
tcctgccagaacaccatgtttggccactttcagccagtcaaccactgctgtttctcccct
gacgacagctacttgtccacttcctccaacgacgggaccgttaagctatttcaggtgtcg
tctgccaatgagtggaagacaatcgatgtgaggagcatatttacagacagcgacgacgac
gacgtcctcgtcaagtgcagcacctggacggctgacggcaaacgcatcatttgtgctgcc
aggaatgctgttttggtgtttgatgtggagacgtcagacatgttgttggagatcaggacc
aatcgtttgagcacagtgcaacactgtcatgcctgtcccaccagcaacctgctggccatc
gccttctcaaactatgctgtggagctgtgggatcttgaagccaataagaagatggctgac
tgcagtggtcacctgagttgggtccagcgtgtccagttttctcctgacggctcacagctg
ctatcctgctcggatgaccagactgtcaggttatgggagaccaagaagcttcacacgtcc
tcagccatctgcctgaagagagattctgacgttctcttcaacgatggcgagatcatcgtg
tcggctgcagacaactccaacaggctgcaggtgcgtgatggcagaacgggatcggtgctg
ttccagtcagaggagaagtcgtccaggatccgatgtacctgtatgtgcaggcagccccct
gctgtggtcctcggccaagaggacggcactgtgcaggtgttggtggtgccctctgggaaa
cttctagccactctgctgggacacacgaagaccgtgctccactgccagttcagccagaac
ggccgaacactcatcacatcctctgaggacaccaccatcagggtgtggaggtggcaatca
ggtgagtgtaaagtactgcagggtcacaaggagcaggtcagatgcttctctctgctctcc
aactctccaaacgatgccagactgctgtcctggtccttcgacggtaccgtgaaggtgtgg
gacacggagagcggagagaaactgcaggacgtcgaggctcatcggggagccattctgtcc
tgtcatgtctcgccagacagatgccttttcgccaccacctctgctgacaagagtgctaag
ttgtggcactgtgagtcctggcagtgcatctacacactgagcggtcaccaagagtgtgtc
cgaagctgccgattctcgtgggacagccaacgcctcgctacgggagatgacaacggggag
atccggctctggagcgtcactgaaggctccttgctgaagatttgttcccgggacagtaag
gatggcatggactccctccacggaggctgggtgacagacctgcacttctcccccgacgac
tctcttctggtctcgaccgggggctacgtcaagtggtgggacgtggagcgaggcgaagcc
ctgcagaccttccacccaacgggaagcgctttgaagaagatccacgtgtcgtccgacttc
tccaccttcgtcaccatcgacaacatcggcatcctctacctcctccgcagggtggcgtga
DBGET
integrated database retrieval system
