Brachyistius frenatus (kelp perch): 138631352
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Entry
138631352 CDS
T10614
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138631352 (scn4ab)
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138631352 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
138631352
NCBI-ProteinID:
XP_069572319
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MAPLLPPVGMEVFRRFTPASLEEAQRRHEAEEKEQQRRKEKNIEIAEENLPKPASDLEAG
KPLPFIYGDPPPELLNTPLEELDPFYQSQKTFIVLSRGNIIYRFNAEPSCYLLTPFSRWR
TVAIKILIHSLFSLFIMMTILANCVFMTMSDPPAWSKTVEYVFTGIYTFEATVKVLSRGF
CMGGFTFLKDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLTPPPFLSNHTSDVLQTGFH
GNDTYSNNTKSSDFDFYEYINNPGKMSSLIHLHRLLEILTSTLSVCLPIENYYYLPGHLD
ALLCGNSSDTGVCPDGYICLKAGRNPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTL
RAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYAVQNEATIAEAKQKEEEYAQILEAVK
RREEEQAACRAARSEKQDFTQSADNEEEHTAMDDFEDEQRPCPPCWYAFADVFLKWNCCG
CWLWLKQWLYTIVTDPFVDLGITICIVLNTVFMAMEHYPMTEEFEELLSVGNLVFTGIFT
AEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKS
WPTLSMLMKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRIAEDCELPRW
HMYDFFHAFLIIFRVLCGEWIETMWDCMEVSGQSMCLVVYMMVLVIGNLVVLNLFLALLL
SSFSGDNLAAPEDEAENNLQIAINRINRAAAWSKIWILEHIWTLLEKKTPVNPDHTAVNC
EEDERMTKEVLALTFVTSDTPVSHVAAPCGNHGNLTSNYHNIASLRVPIAEAESDFETPD
DEDDEDDEDDEDDDEEDEEKHSQADESSICSTVQKLPEVQEDEHEDDEDTNTPEDCFNEK
CYSRWPFLDIDTSQGKGEVWSNLRRTCFCIVEHNYFETFIIFMILMSSGALAFEDIYMEQ
RRVIKTVLEYADQVFTYVFVVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLTANIL
GYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIM
GVNLFAGKFYYCFNETSKEMFHADDVHNKTECLALIQENFTEVRWKNVKVNYDNVGLGYL
SLLQVATFKGWMDIMYAAVDSTQVESQPVYEDNLYMYLYFVCFIIFGSFFTLNLFIGVII
DNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPENRFQGLVFDLVTKQFF
DIFIMVLICLNMVTMMVETDEQSEDKEIILYWVNLVFIIVFTNECSLKIIALRQHYFAVG
WNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFAL
MMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFESFGNSMICLFMITTS
AGWDGLLSPIMNTPPDCDPDIENPGSAVRGNCGSPAVGIVFFTTYIIMCFLVVVNMYIAI
ILENFNVATEESADPLCEDDFEMFYETWEKFDPAASQFIQYSELSHFCDTLQDPLRIPKP
NTIKLIHMDLPLVPGDKIHCLDILLALTAQVLGDSGAMDALKASMEEKFMANNPSKVSYE
PISSTLRRKQEEVAATVIQRVYRRHLLQRTVKLASYKYREKTEGRRGEEMPPETEGLLCK
QMTRLYGDGEQTVSRVSCEDPPVRVELQNEFVLHAAPPRNTPNFMQDKNLRESIV
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctctactgccccctgttggtatggaggttttcagacgcttcacgccggcgtcg
ctggaggaagcccaacgacgacacgaggccgaagagaaggagcaacaaaggaggaaggag
aagaacatcgagatagctgaggaaaatcttcctaaaccagcaagtgacctggaagccggg
aagcccctccccttcatctatggagatccaccccctgagcttctcaacaccccattggag
gagctggatcccttctaccaatcacagaagaccttcatcgttctcagtagaggaaacatc
atctacaggtttaatgctgaaccttcctgttacctgctgactccattcagccgttggagg
accgtcgccatcaagatcctcattcactctttattcagtttgttcatcatgatgacgatt
ctggccaactgtgtgttcatgacaatgagtgatcctccagcatggagcaagactgtagag
tacgtgttcaccggcatctacacgtttgaggcgactgtcaaagttctgtccagaggcttc
tgtatgggaggtttcaccttccttaaagatccctggaactggctggacttcatggtcatc
agcatggcgtatgtcacagaatttgtagatttgggaaacgtttctgctctgagaacgttc
cgagttctgagagcactgaagaccatcacagtgatcccaggtttaaagacgattgtcgga
gctctcatccaatcggtgaagaagctggctgatgtcatgatcctgaccgtgttctgcctc
agcgtcttcgctctgattggtctgcagcttttcatgggaaacctgaggcaaaaatgtgtc
ctgacaccgccaccgtttcttagcaaccacacatcagatgtcctacaaacaggtttccat
ggcaacgatacttatagcaacaacacaaaaagcagtgactttgatttctatgagtacatc
aacaacccaggtaagatgagctcattgattcatcttcatcgtctccttgaaatactgact
tctactctgtctgtctgtctacctatagagaactattactaccttcctggtcatcttgat
gctctgctatgtggaaacagttctgacaccggggtctgtccggatggttacatctgcctg
aaggcggggagaaacccaaactacggctacaccagctacgactccttcggttgggccttc
ctggccctgttcagactcatgacgcaggacttctgggagaacctgttccagttgacgctg
cgtgcagcagggaaaacctacatgatctttttcgtgctcgtcatcttcctcggctcattc
tacctcattaacctcatcctggcggtggttgccatggcgtacgctgtgcagaatgaggcc
accatcgctgaggccaagcagaaggaggaggagtacgctcagatcctggaggcggtgaag
aggagggaggaggagcaggcggcctgtagggcggcgcgctcagagaaacaagacttcaca
cagtcggcagacaacgaggaagaacacactgccatggacgacttcgaggacgaacagcgg
ccgtgtcctccatgttggtacgcctttgctgacgtctttctgaagtggaactgttgtgga
tgttggctgtggctcaaacagtggctctacaccattgtcacagacccattcgttgacctt
ggcatcaccatctgcattgtcctcaacaccgtcttcatggccatggagcactacccgatg
acggaggagttcgaggagctgctgagtgttggaaatctggtcttcacagggatcttcaca
gcagagatggtgctcaaacttctggcaatggacccgtactactacttccaggtcggctgg
aacatctttgacagcatcatcgtcaccatgagtctggtggagctgggattggctaacgtt
cagggtctgtctgtgctgcgctcgttccgattgatgcgtgtctttaagctggccaagtcg
tggccgactctcagcatgctgatgaagatcatcgggaactcggtgggcgctctggggaac
ctcactctggttcttgcgatcatcgtgttcatcttcgcggtcgtcggcatgcagctgttt
gggaagaactacaaagactgcgtatgtcgcatcgcggaggactgcgagcttcctcgctgg
cacatgtatgacttcttccacgccttcctcatcatcttcagggtcctgtgcggcgagtgg
atcgagaccatgtgggactgcatggaggtctcgggtcagagcatgtgtctggtcgtctac
atgatggtcctggttatcgggaacttggtggtgctgaacctgttcctggccttgctcttg
agctccttcagcggtgataatctggcggctccagaagatgaagcagaaaacaatttgcag
attgccataaaccggatcaacagggctgcggcctggagcaagatctggatcctggaacac
atctggactctgctggaaaagaagacccccgtcaacccggaccacaccgcggtcaactgt
gaggaagacgaaaggatgacgaaggaagttttagctttgacatttgtgacatcagacacc
ccggtgtcacatgtcgcagccccctgtggtaaccatggcaacctgaccagcaactaccac
aacatcgcctcactgcgggtccccatcgccgaggccgagtctgactttgagacgcctgat
gatgaagatgatgaagatgatgaagatgatgaagatgatgatgaagaggatgaagagaag
cactcacaagctgacgagtcgtcgatctgcagcaccgtccagaaactacctgaagtccag
gaggatgaacacgaggatgatgaggatacgaacacacctgaagactgcttcaatgaaaag
tgttacagtcgctggccgttcctggacatagacacgtcccagggtaaaggggaggtgtgg
tctaacctcaggagaacctgtttctgcatcgtggagcacaactactttgagacgttcatc
atcttcatgatcctaatgagtagcggcgctctggcctttgaggacatctacatggagcag
cgccgggtcataaagacagttctggagtacgcggaccaggtgttcacctacgtcttcgtg
gtggagatgcttctcaagtgggtcgcctacggattcaagacatacttcaccaacgcctgg
tgctggctcgacttcctcatcgtcgatgtctctctggtgtcgctgactgcaaacattctg
ggatactctgaactgggagccatcaagtctctgaggactctgagagctctgagacccctg
agggccctctctcgctttgagggcatgagggtggtggtgaacgctctggttggagcgatc
ccatccatcttcaacgtgctgctggtgtgtctgatcttctggctcatcttcagcatcatg
ggtgtcaacctgtttgcagggaagttttattattgtttcaatgagacgtccaaagagatg
tttcacgctgacgacgtccacaacaagaccgagtgtctcgctctgattcaggagaacttc
accgaggtccgctggaagaacgtcaaggtcaactacgacaacgtggggttgggctacctg
tcgctgctgcaagtggccacgtttaaaggctggatggacatcatgtatgcagcggtggac
tccacacaggtggagtcacagccggtatatgaagacaacctgtatatgtacctgtacttc
gtctgcttcatcatctttggctccttcttcaccctcaacctcttcatcggagtcatcatc
gacaacttcaaccagcagaaagctaagttgggagggacagacatcttcatgacggaggag
cagaagaaatattacaacgccatgaagaagctgggctccaagaaacctcagaaacccatc
ccccgacccgagaaccggttccagggtctggtctttgacctggtgaccaaacagttcttt
gacatcttcatcatggtgttgatctgcctgaacatggtgacaatgatggtggagacggac
gagcagagcgaggacaaagaaatcatcctgtactgggtcaacctcgtcttcatcatcgtc
ttcaccaatgagtgcagtctgaagatcatcgctctccggcagcactacttcgccgtcggc
tggaacatctttgactttgtggtggtcattctgtccatcgtaggcctcctcctcgctgac
atcatagagaagtacttcgtctcgccaacactcttccgtgtgatccgattggctcgtatc
ggccgaatccttcgtctgattcgaggagccaaggggatccgcacacttctgttcgcgttg
atgatgtcacttcctgccctcttcaacatcggcctcctgctcttcctcatcatgttcatc
ttctccatctttggcatgtctaactttgcatatgtgaagaaggaggcgatgatcgacgac
atgtttaacttcgagagctttgggaacagcatgatctgtctgttcatgatcaccacgtcg
gcaggatgggacggcctgctgagtcccatcatgaacacgcctcctgactgtgaccccgac
atagagaacccggggtcggcagtgagagggaactgcggcagcccggcggtgggcatcgtc
ttcttcaccacctacatcatcatgtgcttcctggtggtggtcaacatgtacatcgccatc
atcctggagaattttaacgtggccacggaggagagcgccgacccgctgtgtgaggacgac
ttcgagatgttttacgagacctgggagaagttcgaccccgccgcctctcagttcattcag
tacagtgagctgtcacacttttgtgacactttgcaggatcctctgaggattcccaaaccc
aacaccatcaaactgatccacatggacctgcctctggttcctggagacaagatccactgt
ctggacatcctgctggcactcactgcacaggtgttaggtgattcgggagccatggatgct
ctaaaagccagcatggaggagaagttcatggccaacaacccttccaaggtgtcgtatgaa
ccaatcagtagcaccttgcggaggaagcaggaggaggtggcagcgacggtgatccagaga
gtgtacaggagacacctcctgcagcggacggtcaaactggcgtcctacaaataccgagag
aaaacggagggacggcgaggtgaggagatgcccccagagacagaaggacttctgtgtaaa
caaatgactcggctgtatggagacggggagcagacggtttccagggtttcatgtgaggat
cctcccgtccgggtggagcttcagaatgagtttgtcctccacgctgctcctccccgcaac
acccctaacttcatgcaagataagaacctgagggagtctattgtgtga
DBGET
integrated database retrieval system
