Brachyistius frenatus (kelp perch): 138631547
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Entry
138631547 CDS
T10614
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04010
MAPK signaling pathway
bfre04020
Calcium signaling pathway
bfre04510
Focal adhesion
bfre04518
Integrin signaling
bfre04540
Gap junction
bfre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138631547
04020 Calcium signaling pathway
138631547
09133 Signaling molecules and interaction
04518 Integrin signaling
138631547
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138631547
04540 Gap junction
138631547
09142 Cell motility
04810 Regulation of actin cytoskeleton
138631547
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bfre01001
]
138631547
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
bfre04090
]
138631547
Enzymes [BR:
bfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
138631547
Protein kinases [BR:
bfre01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
138631547
CD molecules [BR:
bfre04090
]
Proteins
138631547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
APH
Stevor
RIFIN
Orf78
Motif
Other DBs
NCBI-GeneID:
138631547
NCBI-ProteinID:
XP_069572665
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MMVAFRGQTGGLNLLHFLLGVFLVCPERGVSLELQPSTSELLLNSSSNYTVVCSGWSQVT
WRLPQDFHVDGVFVDNQGSSSILQLFNATWKNSGRYTCEEASSDQIRNVDVFIPGRGPDE
WFVPVGPGVVMKEAEEDTIPCVVSDPQLNVSLFERSNRMPVSGMTYEPGRGFTGRLNDTS
YVCLAARGAEEKESHVYYVFSIIVPKEMEVDLTVSSSVLKQGEVLTVNCTVKESEMVFFS
WDFPRRQEIEPLTDFLPNRIRSFVNISAATMADSGVYVCAVEETIQGRTVKKNITVTVLD
RGYISLWPSGETNVSSLLHQTVEFSVEIEAHPAPTVLWTRDNQTVATETTSITTTHVMDS
RYVSTLTLVRVQMDQTGSYTATVSNDDDFNEVVFDLEVKAPPRITSLSEVGSNAVLCVSE
GAPPPSVTWYTCHSSLRCSNLSGGWTSLSAASEGVTLRQNITEVGERGVTQVHSVLTLQA
LSSLSAVRCEAKNSAGRRTRDLRVVSSSLLSQVVVLVAVLVLVVIAVIFLIILIILCRKK
PRYEVRWKVIESVSADGQQYTYLDPAHLPYNSAWEIPRDHVALGQVLGSGAFGRVVEATV
SDLIHSHSTTKVAVKMVKPRSDAVQSLMSELKVMVHLGPHLNVVNLLGACTREGPVYLIT
EFCRHGDLVNYLQRNKHTFLQGNTHSKSDSDGGYMDMNKEESIQYVAMKELSYADIEPAM
YETLYTPADQQEAPLPSLSDSALLSLNDLVSFSYQISQAMNFLSSRKCVHRDLAARNVLV
CEGKLVKVCDFGLARDLLKDEDYIARGNSFLPLKWMSPESIFQNIYSSQSDVWSYGVLLW
EIFSLGCSPYPDLAMTQEFYSALKRGYRMNRPEHAPQNIYDLMKQCWDEKPLSRPSFSSL
AVSVGNMLSDDYKEHYLQMTEDFLKGENPAVVRSRLSSSRTAEDQTDGQTDTRGSPTPQA
KVPLAEAEPEEAGPSHGTYVIPVTDITIESGNGAALDAVSPQLSDSPDILESQEAPETQE
VTSEDRKEVTSEDRQDAADPPASSCSREGDEESCL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggccttcagggggcagacaggaggtctaaacctgctgcacttccttttgggt
gtgttcctggtttgtcctgaaaggggcgtgtctttggagctgcagccttcaacctctgaa
cttctgctcaactcaagctccaactacactgtggtgtgttcagggtggagtcaggtgacg
tggcggttacctcaggactttcatgtagacggggttttcgtggacaatcaggggtccagc
agcatcctgcagctctttaacgccacctggaagaattctgggagatacacttgtgaggag
gcgtcatccgatcagatcaggaacgtcgatgtcttcatacctggacgaggtccagatgaa
tggtttgtccctgtgggtccaggcgtggtgatgaaggaggcggaggaagataccattcct
tgcgtggtgtccgacccgcaactcaacgtctctctgtttgaacgttccaataggatgccg
gttagcgggatgacgtacgaaccgggccgcggcttcacgggtcgtctcaacgacacgtca
tacgtgtgcttggccgcccgcggagccgaggagaaagagtcccatgtgtactatgtcttc
agcatcatagtccctaaagagatggaggtggacctgaccgtgtccagcagtgtgttgaag
cagggggaagttctcactgtcaactgcaccgttaaagaaagtgagatggtcttcttctcc
tgggacttcccccgcagacaggaaattgagcctctgacagactttttgcccaatcggata
cgctcctttgttaacatctccgcggcaacgatggcagactcaggtgtgtatgtgtgtgca
gtggaggagacgattcagggacgaactgtgaagaaaaacatcacagtaacggtactggac
cgaggttacatctccctgtggccttcaggtgagaccaacgtgtcatctctcctccatcaa
acggtggagtttagtgtggagatcgaagcccaccccgcccccaccgtcctctggacgaga
gacaaccagactgttgccacggaaaccacctccatcaccacaacacacgtgatggacagc
aggtatgtgagcacactgacactggttcgagtgcagatggatcagacaggaagttacact
gccaccgtttccaatgacgacgatttcaacgaggttgtctttgacctggaggtcaaagca
ccccccaggatcacatctctgtcagaggtcggcagtaatgctgtgctttgtgtcagcgag
ggagctccgcccccttctgttacctggtacacctgtcacagctcactcaggtgtagtaat
ttgagtggtggctggacgagcctatcagcagcctcggagggcgtgaccctgcggcagaac
atcactgaggttggcgagagaggcgtcacccaggtacacagtgtgttgactctccaggct
ctcagctctctgtcagctgtacgctgtgaagccaaaaactcagcgggacgtcgaaccagg
gacctgcgagtcgtgtccagctctcttctgtctcaggtagtggtcttggtagcagttctg
gttctggtcgtcatcgctgtcatcttcctcatcatcctcatcatcctctgcagaaaaaaa
cctcgttatgaggttcgttggaaggtgatagagtccgtgagtgctgacggacagcagtac
acctacctcgaccccgcccacctgccctacaactccgcctgggaaataccacgagaccac
gtagctctgggtcaggtgttgggttcaggtgcgttcggtcgtgtcgtcgaggcaaccgtc
tctgatctgattcactctcattctacaaccaaagtggctgtgaagatggtcaaaccgaga
agtgatgcggttcagtctctgatgtcagagttgaaggttatggttcatctcggtcctcac
ctgaatgtcgtcaacctgctgggagcctgcacgagagaaggtcctgtctatctgatcact
gagttctgtcgtcatggagacttggtaaactacctgcagaggaacaaacacactttccta
cagggcaacacacacagcaagagtgacagcgatggcggttacatggacatgaacaaagag
gagagcattcagtacgtcgccatgaaggagctcagctacgccgacattgaacccgccatg
tacgagacactatacacgccagcagaccagcaggaggcgccgttgccgtccctgagcgac
tctgctctcctcagcctcaatgacctagtcagcttctcctaccagatctctcaggccatg
aacttcctctcctccaggaagtgtgtccacagagacctggcagcgaggaacgtcctggtc
tgtgaggggaagctggtgaaggtctgtgacttcggtttggccagagacctgctgaaggat
gaggattacatcgccagaggaaacagcttcctgcccctgaagtggatgtcgccagagagc
atcttccagaacatttacagctctcagagcgacgtctggtcctacggagtcttactgtgg
gagatcttctctctgggctgcagcccgtatcccgacctcgcaatgacccaggagttttac
tctgctctgaagagaggatacagaatgaatcgacctgaacacgcgcctcaaaacatttat
gacctgatgaaacagtgctgggacgagaaacctctgtccagaccttccttctcctccctg
gctgtctccgtgggaaacatgttgagtgacgactacaaagagcattacctccagatgaca
gaagacttcctcaaaggagaaaatccagctgttgttcgatcgagactgagttcatccaga
actgctgaggatcagaccgacgggcagacggacacacgcggaagtcccaccccccaggcg
aaagtccccctggcagaggcggagccggaggaggcaggcccctcccacggcacttacgtc
atccccgtcactgacatcaccatagagagcggcaacggcgctgcgctggacgcggtcagc
cctcagctgtcggattcccccgacatcttggagtctcaggaagcaccagaaacacaggaa
gtgacatcagaagacagaaaggaagtgacatcagaggacagacaggacgctgcagaccct
cccgcgtcgtcctgcagccgtgagggagatgaggagagctgcctgtga
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integrated database retrieval system
