Brachyistius frenatus (kelp perch): 138632852 Help Entry 138632852         CDS       T10614                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism bfre  Brachyistius frenatus (kelp perch) Pathway bfre04115   p53 signaling pathway bfre04145   Phagosome bfre04148   Efferocytosis bfre04350   TGF-beta signaling pathway bfre04510   Focal adhesion bfre04512   ECM-receptor interaction bfre04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bfre00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     138632852   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     138632852  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     138632852    04148 Efferocytosis     138632852   09143 Cell growth and death    04115 p53 signaling pathway     138632852   09144 Cellular community - eukaryotes    04510 Focal adhesion     138632852   09142 Cell motility    04820 Cytoskeleton in muscle cells     138632852  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bfre04131]     138632852   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bfre00536]     138632852 Membrane trafficking [BR:bfre04131]  Endocytosis   Phagocytosis    Opsonins     138632852 Glycosaminoglycan binding proteins [BR:bfre00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138632852 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 EGF_CA TSP1_ADAMTS cEGF TSP1_CFP_C EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  138632852 NCBI-ProteinID:  XP_069574804 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MKLCVIFLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPNSPAYKV LNADLIPSIPDSSFRDLLDSIQAERGFLLLVNLKQFKKNRGSLLTIEKIDGSGPVFEIIS NGKANTLDVVFSTADQQHLVSIEDAVLATGHWKNITLFVQDDQAQLFVGCEEINISELDV PIQTVLSREVANIARLRIGKGAVKDKFMGVLQNVRFVFGTTLNAILRNKGCQSGAALTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQTVCGFSCDDIAGMFKELRGLNVVIKQLSNELQK VTEETITLKNSMNIHNQVCIHNGIMHNDKDEWTVDGCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGPPNDYAEDGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITQIRLCNSPTPQMGGRDCQGEG RQTKICKKSPCPVNGGWGPWSPWDTCSATCGGGNQIRKRLCSDPAPKYGGKDCVGDAAVS QICNKEVCPVDGCLSSPCFPGTKCISFPDGSFNCGRCPLGFTGDGVTCKDIDECKEVPNA CHTHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCRARNPCQDGSHNCN KNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPKVYNPAQYDTDRDDIGDRCDNCV FESNTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDHDD DNDGIPDNKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVLDIHDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSPTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI HDKTYAGGRLGLYVFSQEMVYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgtgtgtcatctttttgctgttgatgctgtggagttgtgaaggcgcaagactg gcagagagtcgggatgataacagtgtgtatgacttgtttgatctggcccgagtaaacaag agacatcacggagtgagtttggtcaaaggcgcagatcccaacagccccgcatacaaggtc ctgaacgcagacctgatcccctccatccccgacagctccttcagggacctcctcgactcc attcaggccgagcggggcttcctcctcctggtcaacctgaagcagttcaagaaaaacagg ggcagccttttgaccatcgagaagatcgacggatccggacccgtcttcgagatcatttcc aacggcaaggcgaacacccttgatgtggtcttctccaccgcggaccagcagcatctcgtg tccatcgaagatgcagttttggccactggccactggaagaacatcacgctgttcgtgcag gatgaccaggcgcaactttttgtcggctgtgaagaaatcaatatctcagagttggatgtg ccaatccagacagtgctgtcccgggaggtggcaaacatcgccaggctcaggattggaaag ggagcagtgaaggacaagtttatgggagtgcttcagaatgtgcgctttgtctttggtacc actctgaatgccatcctgagaaataagggatgtcaaagtggagcagctctaactgatgtc atgaccctggacaacccagtcaacggctccagccctgccattaggaccgactacaccggc cacaaagccaaagatctgcagactgtctgtggcttctcctgtgacgacatcgccggcatg tttaaggagctccggggactcaatgtggttattaaacagctgtcgaatgagctccaaaaa gtgactgaggaaaccataaccctgaaaaattctatgaacatccacaatcaagtctgcatc cacaacggcatcatgcacaacgacaaagatgaatggaccgtggacggttgcactgagtgc acctgccagaactctgccaccgtgtgtcgtaaaatctcctgcccgctgatcccatgtgcc aacgccactgtgcccgacggcgagtgctgccctcgctgtggaccaccaaacgactatgca gaggatggctggtccgcctggtctgactggacccactgttcggtgacttgcggccgtggc atccagcagcgtggccgttcctgcgaccgcatcaacagcaagtgtgagggcacctctgtc caaacccgtgactgctatccacaggaatgtgacaaacgcttcaagcaggatggaggttgg agccactggtcaccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacccag atccgcctctgcaactcccccacgccccagatgggtggcagggactgccagggagaggga cgtcaaaccaaaatctgcaagaagtctccatgtcctgtcaatggaggttggggaccttgg tcgccatgggacacctgctctgctacctgcggtggaggaaaccagatccggaagcgtctt tgctccgaccccgcccccaaatacggaggaaaggattgtgttggtgatgctgctgtgtct caaatttgcaacaaagaagtctgccctgttgatggctgtctctccagcccctgcttcccc ggcacaaagtgcatcagcttccccgatggctctttcaactgtggcagatgtccacttggc ttcactggggacggtgtaacctgcaaagacattgacgaatgtaaagaggttcccaatgcc tgccatacacataacggagtccatcgctgtgagaacactgagccagggtacaactgtctt ccctgccctgcacgtttctccggtcctcagccctttggaagaggagtggaacaggcaact gccaaaaaacaggtttgcagagcccgtaacccttgtcaggacggcagccacaactgcaat aaaaatgcaaactgcatctacttgggtgtcttctccgagtccatgttccgctgcgagtgc aagccaggttatgccgggaacggccggatctgcggcgaggacagtgacctggacgggtgg cccaacactgacctgctgtgtgtggagaacgccacttatcactgcaagaaggataactgc cccaaccttcccaactctggtcaggaagatcatgacaaagacggcctgggtgatgaatgt gaccatgatgatgacaatgatgggatccccgatgatagggacaactgtccaaaagtgtac aaccctgctcagtatgacacagacagagatgatatcggcgatcgctgtgacaactgtgtg tttgaatccaacactgaccaaactgacactgacaacaacggagagggtgatgcctgtgct gttgatattgatggcgatggtattctgaatgagaacgacaactgcccgtatgtttacaac gtggaccagagagacactgacagagacggggtgggagaccattgcgataactgtcctctg gagcacaaccctgatcagatcgactctgactcagatcgcattggagacaagtgcgacaac aatcaggacattgatgaggatggtcaccagaacaacttggacaactgcccctacatcgcc aacgccaaccaggcagaccacgacaaggacggcaagggcgacgcctgcgaccatgatgac gacaatgacggcatccccgacaacaaagacaactgtagactggcctttaaccctgatcaa ctggactctgatggcgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaat gtcctggacatccatgatgtgtgcccggagaactttgccatcagtgagaccgacttccgc cgattccagatggttcctctggatcccaaaggcacctctcagatcgaccccaactgggtg gttcggcatcagggcaaggagttggtgcagactgtcaactgtgaccctggcattgctgtt ggttatgatgagttcagcgcagtggatttcagtggaacgttcttcatcaacacggacaga gatgacgactacgccgggtttgtgttcggctaccagtccagctcccgcttctacacggtg atgtggaaacagatcacacagacctactggtcccccacacccacaagagctcaaggctac tctggcttgtcaatcaaagtagtcaactccaccacagggcccggtgagcacctgaggaac gccctgtggcacactggagacaccccaggacaggtccgcactctgtggcacgaccccaag aacatcggctggaaggacttcactgcctatagatggcatctgacccacagacccaagact ggacttattagagtggtcatgtatgaaggcaagagaatcatggccgattctggaaacatc cacgacaagacgtacgctggtggacgactgggcttgtacgtcttctctcaggagatggtt tacttctcggacctcaaatacgaatgcagagattcctaa

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