Brachyistius frenatus (kelp perch): 138633594
Help
Entry
138633594 CDS
T10614
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138633594 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138633594 (smg6)
03032 DNA replication proteins [BR:
bfre03032
]
138633594 (smg6)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138633594 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
138633594 (smg6)
DNA replication proteins [BR:
bfre03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138633594 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
138633594
NCBI-ProteinID:
XP_069576044
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSVNITDRQKEEQPEHYIHKQHRRREVKHPDLQRYHPVAG
HGRRHLDSEEGSSGLSDPLAADSHEHDQPPQSEQKAISEHDLERKGCTDGGSGTNKRDER
TRGDTSNTQNCRKASHSLAEIDPNDGKGFVENDRADQEPAGAAKLTRKARKPDREFYQPG
TRRSIQGKDCAVGREQDKPPPRKEEQKPEPESPLSTKGDKKTSIQKQGGKEKQVKAAQEI
EKLTTCSEANRKQGSQDVETPPLPIDTSVEKIASSVEKLSIKEKGKAGCAGQVVGELSCR
RGDTTDKERKGQSVGTKDGEEKAEKKREKGNRRRRGAEKEKEKTQDSRREDEMGGGGKND
RGKAEKDRNKRAAEADGKKTEKAGETHQSKRENRGENRRGDNNNSRSRDAEKDAKTDRNL
DRAVERGDRNKFNANVTSLTSKRYSKSDIRRSRNRTYSSSSASSVTSVDGPGLGRDVETT
KWSRSVARHNNREVTVNSGEGRRRYLQSWTTNEESSTESMEGSEMSDRAEDRRRRRRGGD
EDLNTERRGEERNRPKGDKGGGRGILRVSLEKQSGGEAQPRKQGLVPRGRGGGILVLPSR
TDISNSPPEVGQRLLFGGIRGGMASRSRGGRGGGVRRLWDPNNPDQKPALTRTQPSQHLS
HQQPGYLQTGTGYGQLHFLDTDDEVAGSPPVQQGEHFRSQQAAAMAYYKFQNSDNPYCYP
MPTSNPQNPNSSSTSQRYPYPYHMGPYQVAHPNGMYPSPGTGQFCGSYRAAGYSQPGAGG
GLTFEEAEQQARGELGRMLRAADVQELQLSNLLSRDRVSADGLDRMAQLRADLLGLYEQV
ILTDIELSDSQNVDQALWKNVFYQVIEHFRQMLKDPTYDNTPHIRNMLLTLLDEGALFFD
ALLQKLQTVFQFKLEDYMDGMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSA
NYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESL
MSLFEEAKRKAEQLERRRKQEHEGGSRGPAVRGRGRGEEGARVEIWIRPIGQAATPSSQR
GGSESNRDSEQDGELGSLSAADLNKRFILSFLHAHGKLFTKVGMESFPGVASRVLQEFRM
LLQHGPHLLGSTHMLQIITINMFTIHNAHSRGEEGEVRSVLQEQSTAVGLGMFALLVQRC
TELLKETPAELVSMADGEEEGKAEELGGMVRVSAFPLDLRELLPSIKVWSDWMLGHPDLW
NPPPCSIDSCPDVWQCLADLCNELARVDHGEVPLYKVDSDEVEGDEELTVLQLKEDRLLA
GFVPLLAAPQEPCYTDRHTEMAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSIAT
SPPSNHSIDTRSRQDSVTEQESDDVILEAESSLSASEGEEDIEDAGDCENDIRQLKARRH
VLTNKLALQQKRRDKIQAVLQTGGQLELEVRPLFLVPDTNGFIDHLGGLKKLLQCGTYII
VVPLIVITELDGLAKGQDSFGIGVGSGGRSTGSRGNYNVCAAHVRAVQEKARLAVAFLEK
GFEAREPCLRALTSRGSQLESISFRSEDTSGQQGNNDDVILSCCLHYCEDKAKDFMPHQR
NGTVRLQREVVLLTDDRNLRVKALTRNVPVRDIPAFLGWAKVG
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactggaccgagtgcgaatctcagctgcggaactccgagctgaggcgtcg
aattcagtcaacatcaccgaccgccagaaagaggaacaaccggagcattacatacacaag
cagcataggaggcgtgaagtaaaacatccagatctgcagcgctaccacccggtagctgga
catggacggcgccacttggacagtgaggaggggagttctggtctaagcgatcccttagct
gctgattcacacgagcatgatcagccgccacagagtgagcaaaaggccatctccgaacat
gatttagagaggaaagggtgcacagacggtgggtcaggtaccaacaaaagagacgagaga
acaagaggtgacaccagtaatactcagaactgtagaaaggccagccactcgctggctgaa
atagatccaaatgatggaaagggctttgttgaaaatgacagagcggaccaggaacctgct
ggggctgctaaactgacgaggaaagcccgcaaacctgatcgtgaattttatcaacctggg
acccggaggagcatccaaggaaaggactgcgcagttgggagagagcaagacaaacctccc
cccagaaaggaagagcaaaaaccggagccagagtccccgctgagtacgaagggggacaaa
aaaacatccatacagaagcagggagggaaagaaaaacaagtaaaagctgcacaagaaatt
gaaaaattgactacttgtagtgaggcaaacagaaagcaaggaagccaagacgtggaaaca
cctccattacccattgatacttcagtggagaaaattgcaagcagtgttgaaaaactcagc
attaaagaaaagggtaaagcggggtgtgcaggtcaagttgttggagagttgagttgcagg
agaggggacacaactgataaggagaggaaaggtcaaagtgtaggaaccaaagatggagaa
gaaaaggcagagaagaagagagaaaagggaaaccgcagaagaagaggagcggagaaggag
aaagagaagacccaggattccagaagagaagatgaaatgggtggtggaggaaagaacgac
cgtgggaaagccgagaaggatagaaacaagagggctgccgaagcagatgggaaaaaaacg
gaaaaggcaggagagacgcaccaaagcaaaagagagaatcgcggagaaaacagaagagga
gacaacaacaacagcaggtccagagatgcagagaaagatgccaagacagacagaaattta
gacagggcggtagaaagaggcgacagaaacaaattcaacgcaaacgtcacttcactaacc
tcaaaacgctattccaaatcggatattcggcgctcacggaatcgaacttacagcagcagc
tcagccagcagtgtgaccagcgtggatggtcctggactaggacgggatgtggagactacc
aagtggtcacgctctgtggccaggcacaataacagagaggtgacggttaatagcggagaa
ggacggcggcgctatttacaaagttggactaccaatgaggaatcatctacagaatcaatg
gaaggaagtgagatgagcgacagagcagaagataggaggaggagaagaagaggaggggat
gaagacttaaatacagagagacggggggaagaaaggaaccgaccgaagggagacaagggt
ggaggtcgaggaatcctaagggtttctctagaaaaacagtctggtggggaggcacagcct
cgcaagcaaggcctggttcctcgtggcagaggtgggggtatcttggtgcttccttcccgc
acagacatctcaaattcaccacccgaggtggggcaaaggcttctttttggtggaattagg
ggaggaatggcttccaggagcagaggtgggcgaggaggaggagtgagacgactctgggat
ccaaataacccagaccagaaacctgctcttaccagaactcaaccctcacagcatttgtcc
caccagcagcctggatatcttcagactgggactggatacggacagcttcactttctggac
acagacgatgaggtagcaggcagtcctccggtccaacagggtgagcactttcgatcccag
caggctgctgccatggcctactacaaattccaaaactctgacaacccgtactgctatccc
atgcccaccagcaacccacagaatcccaacagcagcagcaccagccagcgctatccatat
ccttatcatatggggccctaccaagtggctcaccctaatggtatgtacccgagccctggg
acaggtcagttctgtgggagttacagagcagctggttattcccagccaggtgcaggaggg
ggtttgacatttgaagaggcggagcaacaagccagaggggagctggggaggatgctgagg
gctgcagatgttcaggagcttcagctcagtaacctgctgtccagggatcgagtgagtgct
gatggactggatcgcatggctcagctcagagcggaccttttggggctttatgagcaggtc
atcctgacagacatcgagctctcagactctcagaatgtggatcaggctttgtggaagaac
gtcttttaccaggtcatagaacacttccggcagatgctcaaagaccccacctacgataac
acccctcatatcaggaacatgctgctcacgctgctggatgagggagcgctcttcttcgat
gcgctgcttcagaagttgcagacggtgttccagtttaagttggaggattacatggatggc
atggcaatcagggctcggccgttacgcaaaacggtaaagtatgcacttataagtgctcag
cgttgtatgatttgtcaaggtgacatagcacgttaccgggagcaagccagtgactcggcc
aactacggcaaggctcgcagctggtacctgaaagcccagcagattgctcccaaaaatgga
cgaccatataaccagctggccctgttggctgtctatacaaagcggaagttagatgcggtg
tattattacatgcgcagcttggcagcttccaaccccattctgactgcaaaggaaagcctg
atgagtctgtttgaggaagcgaagcgtaaggcagagcagcttgagcgaaggagaaagcag
gagcatgaaggtggctccaggggtccagcggtgagaggaagaggaagaggcgaagaagga
gcacgcgtggagatctggattcgccccattggacaagcagcaaccccgtcctcacagaga
ggaggtagcgagtccaacagggactcggaacaggatggagagctgggcagtctcagtgcc
gctgatctaaataagagattcattctgagttttctgcatgcgcatggaaagctcttcact
aaagtgggcatggaatctttccctggagtggcaagtcgtgttttgcaggagttcaggatg
cttctccagcatggcccccacctactgggcagtacacacatgctgcagatcatcaccatc
aacatgttcaccatacacaatgcccacagcagaggtgaagaaggagaagtgcggtcggtt
ttacaggagcaaagcactgcagtgggcctgggcatgtttgcactactggtgcagcgctgc
actgagcttctcaaagagactcctgcagaactagtctccatggcagatggagaggaggag
ggtaaagcagaggagctggggggtatggtgagagtctctgccttcccattggacctcaga
gaactactaccaagcatcaaagtctggtctgattggatgttgggacacccagacctgtgg
aacccaccaccatgcagtatagattcctgccctgatgtttggcagtgcctggctgacctg
tgcaacgagctggcacgtgtggaccacggggaagtgccgctgtacaaagttgatagcgat
gaagtcgagggagatgaggagctgacggtgcttcagttgaaggaagacaggctgctcgcc
ggctttgtgccactactggctgcaccacaggagccgtgttacacagacagacacactgaa
atggcaatagcagcagattgtaagagagtgacagtgctgaagtactttctggaggctttg
tgtggacaggaagagcctctgttggccttcaagggaggcaaatacgtctctattgcaacg
tctcctccatctaaccactcaatcgatacaaggagcaggcaggattctgtaacagagcaa
gagtccgatgacgtcatactcgaggcagagtcatctctgtctgcatcagaaggagaggag
gatatcgaggacgcgggagactgtgagaatgacatcagacaactgaaggcacgacgccac
gtccttaccaacaaactggcactgcaacagaagcgcagagataaaatacaggcggtgctg
cagacaggcgggcagttggagctggaagtccggcctctctttctggttcccgacaccaac
ggattcattgatcatttaggagggctgaagaaactccttcagtgtggaacttacataata
gtcgtgccactcatcgtgattacagagttagatggcttggctaaaggccaggacagtttc
ggcatcggagtaggatcaggagggcgcagcactggaagtaggggcaactataatgtctgt
gcagcccatgtgcgggccgtgcaggagaaagctcggctggcagtggctttcttagagaaa
ggattcgaagccagggaaccgtgtctcagagccctgaccagcagaggaagtcagcttgag
tcaatttctttccgcagtgaagacacatctggacagcagggtaacaatgacgacgtgatt
ctgtcctgctgtctccactactgcgaagacaaggcaaaagatttcatgcctcatcagaga
aatgggaccgtgaggctgcagagagaagtggtactccttacagatgaccgtaacctgcgt
gtcaaagccttgacccgcaacgtccctgtgcgagacatcccagcgttcctcggctgggcc
aaagtgggctga
DBGET
integrated database retrieval system
