Brachyistius frenatus (kelp perch): 138635401
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Entry
138635401 CDS
T10614
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138635401 (dhx9)
03012 Translation factors [BR:
bfre03012
]
138635401 (dhx9)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138635401 (dhx9)
5.6.2.6 RNA 3'-5' helicase
138635401 (dhx9)
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138635401 (dhx9)
Translation factors [BR:
bfre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138635401 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
138635401
NCBI-ProteinID:
XP_069578936
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPSYDIRAGGNKIRQKFMCEVRVDGFNYIGMGNSTNKKDAQSN
AARDFVSYLVRVGQMSAAEVPALGVSAPEADLTDGGGGGGGRGAGGDSGFGSLPSSGPLP
PHLVVKAEHDGMDGSSIGGGPVPGVTGLGYSGGGNSGWGGGRGGGDEGGAQWERGANLKE
YYAKRDEQEAQATLESEEVDLNANLHGNWMLENAKARLNQFFQKEKSSAEYKYSQVGPDH
NRSFIAEMQLFVRQLGRRITAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGVTKKKE
GETLEVYEVNMSQDLPAQLASVIQDLGVQIPPPPADPSSPVSLVQGKMATFEPSQRQSGA
GVVPWSPPQVNWNPWTSSNIDDGPLAFCTPEQISGDLHDELMCQLDHDENLQKIRSDRDQ
LPVKQFEEEIMAAVDNNPVVIIRGATGCGKTTQVPQYILDRFIKGHRASDCNIVVTQPRR
ISAVSVAERVAYERGEDIGKSCGYSVRFESILPRPHASVLFCTVGVLLRKLEAGIRGISH
VIVDEIHERDINTDFLMVVLRDVVQAYPEVRILLMSATIDTTMFREYFFNCPVIEVFGRT
FPVQEYFLEDCIQMTNFVPPPMDRKKKDKDEEGGDEDTNCNMICGSDYTAETKRSMAQIN
EKEMSFELVEALLKYIETLRVAGAVLVFLPGWNLICSMQRHLENNPHFGSNRYRILPLHS
QIPRDEQRRVFEPVPDNITKVILSTNIAETSITINDVVYVVDSCKQKVKLFTSHNNMTNY
ATVWASKTNLEQRKGRAGRVRPGFCFHLCSQARFERLETHMTPEIFRTPLHEVALSIKLL
RLGAIGHFLSKAIEPPPLDAVIEAEHTLKELDALDINDELTPLGRILARLPIEPRLGKMM
IMGCIFHVGDAMCTISAASCFQEPFINEGKRLGFVHRNFAGSRFSDHVALLSVFQAWDDV
RINGEEAESRFCDHKRLNMSTLRMTWEAKVQLKEILVNAGFPEDSLMTQMFNTVGPDNNL
DVVVSLLTFGSYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFSEK
IRTRAISAKGMTLVSPLQLLLFACKKISSNGDVVELDDWIKLRIPHEVAGGVAALRAALE
ALVVEVTKDPEYISQMDQTNQRLLNVIRHVSKPSAAGLNMMANNQRMGDGPRPPKMGRFD
GGGGGGGYRGGGGGGGGSGGYRGGGGGYGGGGGGYRGGGGGGYGGGSGYGGRGGYRGGGG
YGGGGSYRGGGGYGGGGGGGGYGGGGGGGGYRGGGYRGGY
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcctgtacgcctggtgcgggaaaaagaagctgactcccagc
tacgacatccgagccggaggcaacaaaatccggcagaagtttatgtgcgaggtccgagtc
gacggcttcaactacatcgggatgggaaactccaccaacaagaaggacgctcagtccaac
gccgcccgggatttcgtcagttatctggtccgagtcgggcagatgagcgcggccgaggtc
ccggctctcggggtgagcgctccagaagctgatctaactgatggaggaggaggaggagga
ggaagaggagcaggaggagacagtggtttcggaagcctcccttctagcggcccgttgcct
cctcacctcgtagtgaaagccgagcacgatggcatggatggcagcagcatcggcggcggg
ccggttccaggagtgacgggactgggttactcaggaggaggaaactctgggtggggcgga
ggtagaggaggaggtgacgaaggaggagctcagtgggaacgaggagccaacctgaaggag
tactacgccaagagggacgaacaagaagcacaagcgaccctggagtccgaggaggtggac
ctgaacgctaatctccacggcaactggatgctggagaacgccaaagcccgtctgaaccag
ttcttccagaaggagaaaagcagtgctgagtataaatacagccaagtcggaccggaccac
aacaggagcttcatagcggagatgcagctgtttgtgagacagctcggaagaaggatcacg
gctcgggagcacggctccaacaagaagctggcggcccagtcgtgcgccctgtctctggtc
cggcagctgtaccacctgggagtcatcgaggcgtactccggagtcaccaagaagaaggag
ggcgaaacgttggaggtgtacgaggtcaacatgtcccaggacctcccggcgcagctggcc
agcgtcatccaagacctcggagtccaaatcccgccaccccccgcagaccccagcagcccg
gtgtctctggttcaggggaagatggcgacgttcgagccgtcgcagcgtcagagcggcgcc
ggcgtcgtcccctggtcgccgccgcaggtcaactggaacccgtggaccagcagcaacatc
gacgacggaccgctggctttctgcactccggagcagatcagcggcgacctgcacgacgag
ctcatgtgccagctggaccacgacgagaacctgcagaagatccgttcggaccgcgaccag
ctgcccgtcaaacagttcgaggaggagatcatggcggccgtcgacaacaacccggtagtg
atcatcaggggggcgacgggctgcgggaaaaccacgcaggttcctcagtacatcctggac
cgcttcatcaaggggcatcgagcgtccgactgcaacatcgtggtcacccagccccgtcgg
atcagcgccgtgtcggtggccgagcgagtcgcctacgaaagaggggaggacatcgggaaa
agctgcggctacagcgtccgtttcgagtccatcctgcctcggccgcacgccagcgtcctc
ttctgcaccgtcggtgttctcctgcggaagctcgaagcgggaatcagaggcatcagtcac
gtgatcgtcgacgagatccacgagagagacatcaacaccgatttcctcatggtggtcctg
cgggacgtggtccaggcctacccggaggtccgcatcctcctcatgtcggccaccatcgac
accaccatgttcagagagtacttcttcaactgccccgtcatcgaggtgttcggacgcacc
ttccccgtccaagagtatttcctggaggactgcatccagatgaccaacttcgtccctccg
ccgatggaccgaaagaagaaagacaaagacgaggagggaggagacgaagataccaactgc
aacatgatctgcgggtcggactacacggcggagacgaagcgctcgatggctcagatcaac
gagaaggagatgtccttcgagctggtggaggcgctgctgaagtacatcgagacgctgcgc
gtggccggcgccgtcctcgtcttcctgcccggctggaacctcatctgctccatgcagaga
cacctggagaacaacccgcacttcggaagcaaccggtaccggatcctgccgctgcactcc
cagatcccccgagatgagcagaggagggtgttcgagccggttcccgataacatcacgaag
gtgattctgtccaccaacatcgcagagacgagcatcaccatcaacgacgtcgtctacgtc
gtcgactcctgcaagcagaaggtgaagctcttcacttcccacaacaacatgaccaactac
gccaccgtctgggcctccaagaccaacctggagcagcggaagggccgagccggcagagtc
cgacccggcttctgcttccacctctgcagccaagctcgattcgagcggctggagactcac
atgactccggagatcttcaggactccgctgcacgaagtcgccctgagcatcaagctgctg
cgactcggcgccatcggacacttcctgtccaaggccatcgagccgccgccgctggacgcc
gtcatcgaggccgaacacactctgaaagagctggacgctctcgacatcaacgacgagctg
actcctctgggacggattctggcccggctgcccatcgaacctcgtctggggaagatgatg
atcatgggctgcatcttccacgtcggcgacgccatgtgcaccatctcggccgcctcctgt
ttccaggagccgttcatcaacgaggggaagcgtctcggcttcgtccacagaaacttcgcc
ggcagtcgtttctcggatcacgtggcgctgctgtccgtcttccaggcctgggacgacgtc
aggatcaacggcgaggaggccgaaagtcgcttctgtgaccacaaacgtctcaacatgtcg
actctgaggatgacctgggaggccaaagtccagctgaaggagatcctggtcaacgccgga
ttccccgaagacagtctgatgactcagatgttcaacacggtgggaccggacaacaacctg
gacgtggtggtttccctgctgaccttcggctcgtacccgaacgtctgctaccacaaggag
aagaggaagatcctgaccaccgaggggcgcaacgccctcatccacaagtcctccgtcaac
tgtcccttcagcagccacgacatgacctacccctccccgttcttcgtcttcagcgagaag
atccgaaccagagcgatctcggccaaagggatgactttagtgagtccgctgcagctgctg
ctgttcgcctgcaagaagatcagctccaacggagacgtggtggagctcgacgactggatc
aaactgaggattcctcacgaggtggcggggggcgtcgcggctctgcgggccgcgctggag
gctctggtggtggaggtgaccaaagaccccgaatacatctcgcagatggaccagaccaac
cagcggctcctgaacgtcatccggcacgtctccaaaccgtcggcggccggactcaacatg
atggccaacaaccagaggatgggagacggtcctcgacctccgaagatgggacgcttcgat
ggaggaggaggtggaggcggttaccgaggaggaggaggaggaggaggaggatcgggaggg
tacagaggaggaggaggagggtatggaggagggggtggaggatacaggggaggaggagga
ggagggtacgggggaggtagcggttatggaggaagaggtggatacagagggggaggtgga
tatggaggaggaggaagttatagaggaggcgggggctacggaggaggaggaggaggtgga
ggatacggaggaggaggaggaggaggagggtacagaggaggggggtacagaggagggtat
taa
DBGET
integrated database retrieval system
