Brachyistius frenatus (kelp perch): 138636236
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Entry
138636236 CDS
T10614
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138636236 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138636236 (irf5)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138636236 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
138636236
NCBI-ProteinID:
XP_069580253
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSVQPRRIRLKPWLLSQVNSSRFPGLQWISSDQRLFQIPWRHATRHLPTSEEENTIFKAW
AVETGKYQEGLDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQPGST
DGVDDEDEEMPNLMELSINSRTSDPPSFNQFGLSTGAAFGLPHVIPLPLLPMTSDLPMTS
DLPVTSELSVTSDVQAQGQMVDQASFVHPCGLSNRLRPPSAVSVHPGPDSMEASNSGGVQ
NQVDPQNHQLCKYDLLSSVPLTDLDLRFQYRGRTVGSLTVSSPQGCRLYYGLLEPNPERV
DLFGPVDLQQVRFPGTSEIQNQKQQYYTAALLDVMDRGLILMMWEQDIYAVRLCQCKVFW
TGPGAPERGPPNPMEREKKIKVFSLNDFLQGLISFQKGDTPEPPPFDIYFCFGEDWPDKK
PKEKKLIMVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDQTVAQFKELQRLLQS
QNIQGPWTSTVP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccggaggatccgtctgaagccctggttgctgtctcaggtgaacagc
agcaggtttcctggtcttcagtggatcagttcagaccagcgactcttccagatcccctgg
agacacgcaacacgccacctgcccacgtcagaggaggagaacaccatcttcaaggcctgg
gctgtggagaccgggaagtaccaggagggtctggacgagcccgacccggccaagtggaaa
gcaaacctgcgctgcgctctgaacaagagccgagagttccagctgaagtacgacggaacc
aaagagacgccggttcaaccgtacaagatctacgaagtgtgcgagcagccggggagcaca
gacggagtcgacgatgaagacgaggagatgcccaatctgatggagctcagcatcaactcc
aggaccagtgacccaccttcgttcaatcagttcggtttgtccaccggcgctgcatttgga
cttccacatgtgatcccgctgcctctgctccccatgacctctgacctccccatgacctct
gacctccccgtgacctctgaactctctgtaacctctgacgtccaggctcagggtcagatg
gtggatcaggcgagcttcgtccatccttgtggactctctaacagactccggcccccttcg
gctgtctccgttcacccgggtccggactctatggaggccagtaactcagggggggtccag
aaccaggtggaccctcagaaccaccaactctgcaagtacgacctgctgagcagcgtccca
ctaacagacctggacctgaggttccagtaccggggccggacagtgggttctctgaccgtc
agtagcccccagggctgccggctttactatggactcctggaaccgaatccggagcgggtg
gacctgttcggacccgtcgacctgcaacaggttcggttcccggggacgtctgagatccag
aaccagaagcagcagtattacaccgcagccctgctggacgtgatggaccgaggtctgatc
ctgatgatgtgggagcaggacatctacgccgtccgcctctgtcagtgtaaagtgttctgg
accggaccgggcgcaccagaacgaggaccaccgaacccgatggagagagagaagaagatc
aaagtcttcagcctcaacgacttcctgcaagggctgatctccttccagaagggcgacact
ccggaaccaccgcccttcgacatctacttctgttttggggaggactggcccgacaagaaa
cccaaagagaagaaactcattatggtgcaggtggttcctgtagtcgctcggatcctgacc
gagatgttctctggagaactgagctggtccaccgacagcatccggctgcagatctccaac
cccgacgtcaaggaccagacggtggcgcaatttaaagagctgcagaggctcctgcagagc
cagaacatccaggggccctggacctccaccgtcccctga
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