KEGG   Brachyistius frenatus (kelp perch): 138636627
Entry
138636627         CDS       T10614                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre04145  Phagosome
bfre04514  Cell adhesion molecules
bfre04672  Intestinal immune network for IgA production
bfre05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    138636627
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138636627
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    138636627
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138636627
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bfre04147]
    138636627
Exosome [BR:bfre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138636627
  Exosomal proteins of epithelial cells
   138636627
  Exosomal proteins of breast milk
   138636627
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3 Psg1 Cna_B
Other DBs
NCBI-GeneID: 138636627
NCBI-ProteinID: XP_069580819
LinkDB
Position
Unknown
AA seq 249 aa
MTSSLLSCCLLFITVCPTDGFLEFTLARCEFNVTDVNKAEYILSLFYERKEYIRYSSSLG
KFVGFTAYGVMNAERLNNDTAELSQRKGETERYCRRNAGIWKETVLSKSVSPSVRLSSST
SSSGRHPSMLVCSVYDFFPKQIQVSWLRDGQKITSDVTSTEELADGDWYYQVHSELEYTP
RSGEKISCVVEHASLDKPLITDWDPSMPESERNKIAIGASGLVLGLILSLAGFIYYKRKA
RGRILVPTN
NT seq 750 nt   +upstreamnt  +downstreamnt
atgacttcttcactgctcagctgctgcctgctcttcatcactgtctgtcccacagatgga
ttccttgagttcacgttggcccgctgtgagtttaacgtcacagatgtgaacaaggcagag
tacatcctctccttgttctacgagaggaaggagtacatcaggtacagcagcagtttgggg
aagtttgttggattcactgcctacggtgtgatgaacgcagaacgattaaacaatgataca
gcagagctgagccagaggaaaggtgaaacggagagatactgtcggcgcaacgctggaatc
tggaaggagactgttctgtctaaatcagtgagtccatctgtccgtctctcctcctccacc
tcctcctccggccgtcatccctccatgttggtctgcagcgtctacgacttcttccccaaa
cagatccaggtctcctggttgagggacggacagaagatcacctctgatgtcacttctacc
gaggagctggccgacggagactggtactaccaggtccactccgagctggagtacacgccc
aggtctggggagaagatctcttgtgtggtggaacacgccagcctggacaaacctctgatc
acagactgggacccgtccatgcctgagtcagagagaaacaagatcgccatcggagcctca
ggtctggttctgggtctgatcttatctctggctggattcatctactacaagaggaaggcc
cgaggacgtattctagtccccactaactaa

DBGET integrated database retrieval system