KEGG   Bacteroides fragilis NCTC 9343: BF9343_3020
Entry
BF9343_3020       CDS       T00239                                 
Name
(GenBank) putative endonuclease
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bfs  Bacteroides fragilis NCTC 9343
Pathway
bfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BF9343_3020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfs03400]
    BF9343_3020
Enzymes [BR:bfs01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BF9343_3020
DNA repair and recombination proteins [BR:bfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BF9343_3020
 Prokaryotic type
     BF9343_3020
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S TRAFD1-XIAF1_ZnF HHH_8 HHH_5
Other DBs
NCBI-ProteinID: CAH08801
UniProt: Q5LAS2
LinkDB
Position
3625845..3626522
AA seq 225 aa
MTKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPRIYQDFP
TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVNDFNSEVPDTLEELIKLPGVGR
KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVSNSCTTPFSVEKELMKNIPDELIPIAHH
WLILHGRYVCQARTPKCETCGLQLMCKYYCEKYKVSKDTPKRKNK
NT seq 678 nt   +upstreamnt  +downstreamnt
atgacaaagaaagaacgttatgaaaaagtaatcgcctggtttcaggaaaatgtgcccgtg
gccgaaacggaactgcattacaacaacccgtacgaactgctgatcgccgttatcctctcc
gcacagtgtacagacaagcgggtgaacatgatcacccctagaatttatcaggatttcccc
acaccggaagcactggctgctaccacaccggaggtgatattcgagtacatacgcagcgta
tcttaccccaataacaagtcgaaacatctggtgggcatggcacgcatgctggtgaacgac
ttcaacagcgaagtacccgatactcttgaagaactgatcaagttacccggtgtagggcgc
aaaacggccaatgtcattcagtccgtcgtgttcaacaaagctgccatggcggtagacact
cacgtcttccgcgtgagtcaccgcatcggactggtaagtaattcctgcaccaccccgttc
agtgtagaaaaagaactgatgaagaacatccccgacgagctgattcccatcgctcaccac
tggctgatcctgcacggacgttacgtctgtcaggcccgcactcccaaatgtgaaacctgt
ggtttacaattgatgtgtaaatattactgtgagaagtataaagttagcaaagacacaccg
aagaggaagaataaataa

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