Botrytis cinerea (gray mold): BCIN_05g07420
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Entry
BCIN_05g07420 CDS
T01072
Name
(RefSeq) Bcsnu114
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_05g07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfu03041
]
BCIN_05g07420
Spliceosome [BR:
bfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
BCIN_05g07420
Complex C
U5 SnRNP specific factors
BCIN_05g07420
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Motif
Other DBs
NCBI-GeneID:
5431142
NCBI-ProteinID:
XP_024548986
UniProt:
A0A384JIK8
LinkDB
All DBs
Position
5:complement(join(2632715..2633277,2633509..2633596,2633759..2635944,2636008..2636147,2636209..2636228))
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AA seq
998 aa
AA seq
DB search
MDDLYDEFGNFIGEAEESDEESQHGNDASAYVYDEYPEEAPEEPTGQELMDLDDEGPSNA
VILHEDKQYYPTAQQVYGEDVETMVQEEDAQPLTQPIIAPVEQKKFNIQEADLPPVHFDR
SFMSDLMNYPEQIRNIAFAGHLHHGKTAFMDMLVLETHDIAERLEKKTGRKKDEQLRYTD
IHVVERERGLSIKSAPMSLVLQSTKGKSHLLNILDTPGHVNFVDEVASSLRLVDGVVLVV
DVVEGVQVNTERIIKHAVLEGLPLTLVVNKMDRLILELKLPPTDAYFKLKHVIEEVNTVI
EATLPGQGESRRLSPEKGNVLFACTSMGWCFTLQSFAKMYADSYTPKKNRGPGLNNEESG
INAHEFARRLWGDIFYNPSRRSFTRKGVEERSKRSFVNFILEPIYKLYSHTISESPEDLK
DTLESLGIFLKPSQYKTDANVLLKLVCEQFFGPSTGFVDMVIQHIPSPVEAAEKNLERHY
TGPLDTTVGTAMKNCDQDGPLVIQITKLLNTIDATGFYSFGRVLSGIARAGTQVRVLGEG
YSIDDEEDMSVATISDVWIAETRYNIPTDGVPAGNWVLLGGVDNSIVKSATIVPLVLPNE
EEAYIFRPITHFTESVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVILG
TGELYMDCVLHDLRRLYAEMEIKVSDPVTRFCETVVETSAIKCYAQTPNKKNKITMVAEP
LDQGIAEDIESGKVSIKSPARVIGKYFEENYGWDLLASRSIWAFGPDDLGPNILQDDTIP
SEVDKKSLLSVRDTIRQGFSWAAREGPLCEEPIRNSKFKITDVILAPEAIFRGGGQIIPT
SRRACYSSFLMASPRLMEPVYSCSMTGPADSVTSLYTVLARRRGHVLSDGPIAGTPLYRV
SGLIPVIDSFGFETDLRIHTQGQATVSLVFDRWSIVPGDPLDKDVILRPLEPAGAQATAR
DFVLKTRRRKGLSEDVSVAKFLEPELFASLKETGILDG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttacgatgagtttggaaacttcattggtgaggccgaggagtcggacgag
gaatctcaacatggcaatgatgcgagtgcatacgtatacgatgaatatccagaggaggca
ccagaggaacctacggggcaggaattgatggacctcgatgatgaaggaccttcgaatgcc
gtaatattacatgaagacaagcagtactaccctactgcgcaacaagtgtacggagaggat
gtagaaactatggtccaggaagaagacgcgcaacccctcacgcaaccaattatagctccg
gtcgaacagaagaaattcaacatccaagaagcggatttaccaccggtacatttcgatcga
agtttcatgtccgaccttatgaattaccccgaacaaatcagaaatattgcttttgctggg
catctacatcacggcaaaaccgcatttatggacatgttggttcttgagactcacgacatt
gctgagcgattagaaaagaagaccggaaggaagaaggatgagcaattgcgttatacagat
atccatgttgttgagcgtgaacgaggactatccataaaatccgcacctatgagcttggtg
cttcagagtaccaaggggaagtcgcatctcctcaatatcctcgatactcctggccatgta
aattttgtggatgaggttgcatcttcattacggctggtggatggagtggttttggttgtt
gacgttgttgaaggagtacaagtcaatacagagcggattatcaagcatgccgttttggaa
ggtctgcccttgactcttgttgtcaataaaatggatcgtctaatcttagagctcaagcta
ccacctacggacgcttatttcaagctgaaacatgttattgaagaagttaatactgtgatt
gaggctactttgccaggtcaaggcgagagcagacgacttagtccagaaaaaggcaatgtt
ctgtttgcctgtaccagtatgggatggtgtttcacgttacaatcattcgcaaaaatgtat
gcggacagttacaccccaaagaaaaaccgaggtcctggtttgaacaacgaggaaagtggt
attaatgcgcacgaatttgcaaggagattatggggcgatattttctacaatccctcaagg
aggtcatttactcgaaagggtgtcgaggagagatcaaaacgctccttcgtgaatttcatc
ctggaaccaatctacaaattatactcccataccattagtgagagcccagaggatttgaaa
gatacactggaatcgcttggaatattcctcaaaccatcacaatacaagacggatgctaac
gtccttctgaaacttgtctgtgaacaattcttcggcccatcgaccgggttcgtcgatatg
gttatacagcatataccttctccggtagaagctgctgagaaaaacttggaacgccattat
actggtccattggatacaacggttggaacggctatgaagaattgcgatcaagatggtcca
ttggtcattcaaataacaaagctattgaacacaatcgatgctacaggattttactcgttc
ggaagagtgttgagtggtattgcacgagcaggcacccaagtacgagtccttggtgaagga
tattcaattgatgatgaagaggatatgagtgttgctaccatatcagatgtgtggatcgct
gagacgagatacaacatccccacagacggagtccctgccggcaattgggttctgcttggg
ggtgtggataattcgattgtcaaatctgcaaccattgtaccccttgttttgccaaatgaa
gaggaggcatatatttttagacctattacccatttcaccgagtcggtcttcaaggtagca
gtggagccgatcaatccttctgagcttcctaagatgttggatggtttacgaaagatcaac
aaaagctaccctcttatcactacaaaggtagaagaatctggcgaacacgtcattctaggc
acgggagaactctatatggactgtgtcctgcatgatctccgacgattatatgcagagatg
gaaattaaagtttccgatcctgtcacacgcttttgtgagacagtcgttgaaacatcagct
atcaaatgttatgcccagacaccaaacaagaagaacaagatcacaatggtggcagaacct
ctcgaccagggtattgctgaagacattgaaagtggcaaggtcagcatcaagagtcctgct
cgagtgattggcaaatactttgaggagaactacggttgggatttattggcttctagaagt
atttgggcatttggtcccgacgacttgggaccaaacatcttacaagatgataccattcca
tccgaggtggataaaaaatcactacttagtgtacgggacactattcgacaaggatttagt
tgggctgctcgagaaggaccattatgtgaagaaccaatccgcaatagtaaattcaagata
acagacgtgatattggctcctgaagcgatcttccggggtggtggtcaaatcattcccacc
tcccgacgcgcatgctattcttccttcctaatggcttctccaagattgatggaacccgtc
tactcctgttccatgaccggacctgcagattccgtcacttcgctctacactgtacttgcc
cgtcgtcgcggtcacgtcttgtctgacggacccattgctggtacacctctctatcgcgtc
agtggactcatccctgtcatcgattccttcggtttcgaaaccgatctccgcattcacact
caaggtcaagcaaccgtttctttagtctttgatcgctggagtatcgtccctggtgatcca
ttagataaagacgttattcttcgacctctcgaaccagcaggcgcacaagccacagcgaga
gatttcgtcctcaagacaagaagaagaaagggtctcagtgaagatgtaagtgtggctaaa
tttttagaaccagaactctttgccagtttgaaggaaacgggtattttggacgggtag
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