Botrytis cinerea (gray mold): BCIN_16g02120
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Entry
BCIN_16g02120 CDS
T01072
Name
(RefSeq) Bccaf16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_16g02120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_16g02120
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BCIN_16g02120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
PduV-EutP
AAA_15
AAA_23
AAA
RsgA_GTPase
ORC-CDC6-like
DUF3584
AAA_28
Arf
AAA_22
AAA_25
AAA_14
AAA_13
MMR_HSR1
SRP54
Motif
Other DBs
NCBI-GeneID:
5433886
NCBI-ProteinID:
XP_001553355
UniProt:
A0A384K6H5
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Position
16:complement(join(839524..840241,840371..840501))
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AA seq
282 aa
AA seq
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MVNSVDDQTAAPSIEVKNLTYKFPDSSLGLTDITLSLPPSSRTLLIGANGAGKTTLLRLL
SGKRLAPTSTISISGLDPFKDSLVGVTYLGLEWVLNPIVRTDIGVRELLTSVGGNHYPER
RDELVQVLDIDLEWRMHQVSDGERRRVQLAMGLIRPWRILLLDEITVDLDLLSRKRFLDF
LREETEKRKCTIVYATHILDNLAGWPTDLVHMSLGRVKEWGNIEKFEKEMSGDSSGNSRL
GELVLKWLGEDLKERGPRKNAGSAGTSYLVAGVGGYGSEKKV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtcaattcagtagatgatcaaacggccgctccttcaattgaagtcaagaaccttaca
tataaattcccggattcgtctttggggcttacggatattacgctgagtttgccacctagc
tcgaggactttactaattggcgcaaatggggccggtaaaaccacactcctgcgtctcctc
tccggaaaacgacttgcgcccacttccacaatttccatctccggtctcgatcccttcaaa
gattctctcgtcggcgtaacctatctcggtctcgaatgggtactcaaccctattgtgcga
accgacatcggtgtccgagaactccttacttccgtgggcggaaaccattatcccgagcga
agagatgagcttgtgcaggttttagatattgatttggaatggcgcatgcatcaagtttct
gatggggagagaagaagagtacaacttgccatgggacttattagaccgtggagaatcctg
ctgttagacgagattacggtggatttggatctcttgagtcgaaagagattcttggatttc
ctgagagaggagacggagaagagaaaatgcaccattgtttatgcgacacacattttggat
aatttggcgggatggccgacggatttggtgcatatgagtcttggacgagtaaaggagtgg
ggtaacatagagaagtttgagaaggagatgagtggagatagtagtggaaattcgagattg
ggagaattggttcttaagtggttgggagaggatttgaaggagagaggaccaaggaaaaat
gcggggagcgcgggaactagttatttagtggcaggtgtgggtggatatggaagtgagaag
aaggtttag
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