Brevibacterium flavum: C628_02245 Help Entry C628_02245        CDS       T04445                                  Name (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism bfv  Brevibacterium flavum Pathway bfv00010   Glycolysis / Gluconeogenesis bfv00020   Citrate cycle (TCA cycle) bfv00260   Glycine, serine and threonine metabolism bfv00280   Valine, leucine and isoleucine degradation bfv00310   Lysine degradation bfv00380   Tryptophan metabolism bfv00620   Pyruvate metabolism bfv00630   Glyoxylate and dicarboxylate metabolism bfv00640   Propanoate metabolism bfv00670   One carbon pool by folate bfv00785   Lipoic acid metabolism bfv01100   Metabolic pathways bfv01110   Biosynthesis of secondary metabolites bfv01120   Microbial metabolism in diverse environments bfv01200   Carbon metabolism bfv01210   2-Oxocarboxylic acid metabolism bfv01240   Biosynthesis of cofactors Module bfv_M00009   Citrate cycle (TCA cycle, Krebs cycle) bfv_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate bfv_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA Brite KEGG Orthology (KO) [BR:bfv00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     C628_02245    00020 Citrate cycle (TCA cycle)     C628_02245    00620 Pyruvate metabolism     C628_02245    00630 Glyoxylate and dicarboxylate metabolism     C628_02245    00640 Propanoate metabolism     C628_02245   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     C628_02245    00280 Valine, leucine and isoleucine degradation     C628_02245    00310 Lysine degradation     C628_02245    00380 Tryptophan metabolism     C628_02245   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     C628_02245    00670 One carbon pool by folate     C628_02245  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bfv04147]     C628_02245 Enzymes [BR:bfv01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      C628_02245 Exosome [BR:bfv04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    C628_02245 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_binding_3 HI0933_like FAD_oxidored Thi4 DAO GIDA AlaDh_PNT_C 3HCDH_N 2-Hacid_dh_C Lys_Orn_oxgnase ApbA Motif Other DBs NCBI-ProteinID:  ANR61437 LinkDB All DBs Position 488625..490034 Genome browser AA seq 469 aa AA seqDB search MTEHYDVVVLGAGPGGYVSAIRAAQLGKKVAVIEKQYWGGVCLNVGCIPSKALIKNAEIA HIFTHEKKTFGINGEVTFNYEDAHKRSRGVSDKIVGGVHYLMKKNKITEIDGFGTFKDAK TIEVTDGKDAGKTVTFDDCIIATGSVVNSLRGVEFSENVVSYEEQILNPVAPEKMVIVGA GAIGMEFAYVLGNYGVDVTVIEFMDRVLPNEDPEVSKVVAKAYKKMGIKLLPGHATTAVR DNGDSVEVDYQKKGSDKTETLTVDRVLVSVGFRPRVEGFGLENTGVKLTERGAIDIDDHM RTNVDNIYAIGDVTAKLQLAHVAEAQGIVAAETIADAETQALGDYMMMPRATFCNPQVAS FGYTEEQAKEKWPDREIKVASFPFSANGKAVGLAETDGFAKIVADAEFGELLGGHLVGAN ASELINELVLAQNWDLTTEEISRSVHIHPTLSEAVKEAAHGISGHMINF NT seq 1410 nt NT seq  +upstreamnt  +downstreamnt gtgactgaacattatgacgtagtagtactcggagctggccccggtggctatgtctccgcc atccgcgcagcccagcttggtaagaaagttgcggttattgagaagcagtattggggaggt gtctgcctgaatgtgggttgtatcccttctaaggcgctgatcaagaacgctgagatcgcc catatcttcacccatgagaagaagaccttcggtatcaacggcgaggttactttcaactac gaggatgcccataagcgttcccgtggtgtctccgacaagatcgtcggtggcgttcactac ctgatgaagaagaacaagatcaccgagatcgacggctttggcaccttcaaggacgccaag accatcgaggtgaccgacgggaaggatgccggcaagaccgtcaccttcgatgattgcatc atcgccaccggttcggtggtcaactccctccgtggtgtggagttctccgagaacgtggtt tcctacgaagagcagattctcaacccggttgccccagaaaagatggttatcgtcggtgcc ggtgcgatcggcatggagttcgcctacgtactgggcaactacggtgttgatgtaaccgtc atcgagttcatggaccgtgttctgccgaacgaggacccagaggtgtccaaggtcgtggcc aaggcctacaagaagatgggcatcaagctccttcctggccacgccaccaccgcggtacgt gacaacggtgattccgtcgaggttgattaccagaagaagggctccgataagaccgagacc ctcaccgtcgaccgtgtcctggtctctgttggcttccgtccccgtgtggagggcttcggc ctggagaacaccggtgtcaagctcaccgagcgtggtgccatcgatatcgatgatcacatg cgcaccaacgtggataacatctacgccatcggtgacgtcaccgccaagctgcagctggcc cacgtcgctgaggcccagggcattgtcgccgctgagaccatcgctgatgcagagacccag gcccttggcgattacatgatgatgccacgtgccactttctgtaacccgcaggttgcttcc tttggttacaccgaagagcaggctaaggagaagtggccagatcgtgaaatcaaggtggct tccttcccattctctgcaaatggtaaggcggtaggcctagcggaaactgatggttttgca aagatcgttgctgatgccgaattcggtgagctgctcggtggacacctggttggtgcaaat gcatcagagctcatcaatgaattggttcttgctcagaactgggatctcaccactgaagag atctcccgaagcgttcatatccacccaacgctatccgaggcagtgaaagaagccgcacac ggcatttccggacacatgatcaacttctag

Brevibacterium flavum: C628_06120 Help Entry C628_06120        CDS       T04445                                  Symbol kgd Name (GenBank) alpha-ketoglutarate decarboxylase   KO K01616   multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] Organism bfv  Brevibacterium flavum Pathway bfv00020   Citrate cycle (TCA cycle) bfv00630   Glyoxylate and dicarboxylate metabolism bfv00785   Lipoic acid metabolism bfv01100   Metabolic pathways bfv01110   Biosynthesis of secondary metabolites bfv01120   Microbial metabolism in diverse environments bfv01200   Carbon metabolism bfv01210   2-Oxocarboxylic acid metabolism Module bfv_M00009   Citrate cycle (TCA cycle, Krebs cycle) bfv_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate Brite KEGG Orthology (KO) [BR:bfv00001]  09100 Metabolism   09101 Carbohydrate metabolism    00020 Citrate cycle (TCA cycle)     C628_06120 (kgd)    00630 Glyoxylate and dicarboxylate metabolism     C628_06120 (kgd)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     C628_06120 (kgd) Enzymes [BR:bfv01000]  1. Oxidoreductases   1.2  Acting on the aldehyde or oxo group of donors    1.2.4  With a disulfide as acceptor     1.2.4.2  oxoglutarate dehydrogenase (succinyl-transferring)      C628_06120 (kgd)  2. Transferases   2.2  Transferring aldehyde or ketonic groups    2.2.1  Transketolases and transaldolases     2.2.1.5  2-hydroxy-3-oxoadipate synthase      C628_06120 (kgd)   2.3  Acyltransferases    2.3.1  Transferring groups other than aminoacyl groups     2.3.1.61  dihydrolipoyllysine-residue succinyltransferase      C628_06120 (kgd)  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.71  2-oxoglutarate decarboxylase      C628_06120 (kgd) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  E1_dh 2-oxoacid_dh OxoGdeHyase_C Transket_pyr 2-oxogl_dehyd_N RPOC_hybrid Motif Other DBs NCBI-ProteinID:  ANR62195 LinkDB All DBs Position complement(1294727..1298392) Genome browser AA seq 1221 aa AA seqDB search MSSASTFGQNAWLVDEMFQQFQKDPKSVDKEWRELFEAQGGPNATPATTEAQPSAPKESA KPAPKAAPAAKAAPRVETKPAAKTAPKAKESSVPQQPKLPEPGQTPIRGIFKSIAKNMDI SLEIPTATSVRDMPARLMFENRAMVNDQLKRTRGGKISFTHIIGYAMVKAVMAHPDMNNS YDVIDGKPTLIVPEHINLGLAIDLPQKDGSRALVVAAIKETEKMNFSEFLAAYEDIVTRS RKGKLTMDDYQGVTVSLTNPGGIGTRHSVPRLTKGQGTIIGVGSMDYPAEFQGASEDRLA ELGVGKLVTITSTYDHRVIQGAVSGEFLRTMSRLLTDDSFWDEIFDAMNVPYTPMRWAQD VPNTGVDKNTRVMQLIETYRSRGHLIADTNPLSWVQPGMPVPDHRDLDIETHSLTIWDLD RTFSVGGFGGKETMTLREVLSRLRAAYTLKVGSEYTHILDRDERTWLQDRLEAGMPKPTQ AEQKYILQKLNAAEAFENFLQTKYVGQKRFSLEGAEALIPLMDSAIDTAAGQGLDEVVIG MPHRGRLNVLFNIVGKPLASIFNEFEGQMEQGQIGGSGDVKYHLGSEGQHLQMFGDGEIK VSLTANPSHLEAVNPVMEGIVRAKQDYLDKGVDGKTVVPLLLHGDAAFAGLGIVPETINL AKLRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATDYAKAFGCPVFHVNGDDPEAVVWV GQLATEYRRRFGKDVFIDLVCYRLRGHNEADDPSMTQPKMYELITGRETVRAQYTEDLLG RGDLSNEDAEAVVRDFHDQMESVFNEVKEGGKKQAEAQTGITGSQKLPHGLETNISREEL LELGQAFANTPEGFNYHPRVAPVAKKRVSSVTEGGIDWAWGELLAFGSLANSGRLVRLAG EDSRRGTFTQRHAVAIDPATAEEFNPLHELAQSKGNNGKFLVYNSALTEYAGMGFEYGYS VGNEDSVVAWEAQFGDFANGAQTIIDEYVSSGEAKWGQTSKLILLLPHGYEGQGPDHSSA RIERFLQLCAEGSMTVAQPSTPANHFHLLRRHALSDLKRPLVIFTPKSMLRNKAAASAPE DFTEVTKFQSVIDDPNVADAAKVKKVMLVSGKLYYELAKRKEKDGRDDIAIVRIEMLHPI PFNRISEALAGYPNAEEVLFVQDEPANQGPWPFYQEHLPELIPNMPKMRRVSRRAQSSTA TGVAKVHQLEEKQLIDEAFEA NT seq 3666 nt NT seq  +upstreamnt  +downstreamnt gtgagcagcgctagtactttcggccaaaatgcgtggctggtagacgagatgttccagcag ttccagaaggaccccaagtccgtggacaaggaatggagagaactctttgaggcgcagggg ggaccaaatgctacccccgctacaacagaagcacagccttcagcgcccaaggagtctgcg aaaccagcaccaaaggctgcccctgcagccaaggcagcaccgcgcgtagaaaccaagccg gccgccaagaccgcccctaaggccaaggagtcctcagtgccacagcaacctaagcttccg gagccaggacaaaccccaatcaggggtattttcaagtccatcgcgaagaacatggatatc tccctggaaatcccaaccgcaacctcggttcgcgatatgccagctcgcctcatgttcgaa aaccgcgcgatggtcaacgatcagctcaagcgcacccgcggtggcaagatctccttcacc cacatcattggctacgccatggtgaaggcagtcatggctcacccggacatgaacaactcc tacgacgtcatcgacggcaagccaaccctgatcgtgcctgagcacatcaacctgggcctt gccatcgaccttcctcagaaggacggctcccgcgcacttgtcgtagcagccatcaaggaa accgagaagatgaacttctccgagttcctcgcagcatacgaagacatcgtgacacgctcc cgcaagggcaagctcaccatggatgactaccagggcgttaccgtttccttgaccaaccca ggtggcatcggtacccgccactctgtcccacgtctgaccaagggccagggcaccatcatc ggtgtcggttccatggattacccagcagagttccagggcgcttccgaagaccgccttgca gagctcggcgttggcaagcttgtcaccatcacctccacctacgatcaccgcgtgatccag ggtgctgtgtccggtgaattcctgcgtaccatgtctcgcctgctcaccgatgattccttc tgggatgagatcttcgacgcaatgaacgttccttacaccccaatgcgttgggcacaggac gttccaaacaccggtgttgataagaacacccgcgtcatgcagctcattgagacataccgc tcccgtggacacctcatcgctgacaccaacccactttcatgggttcagcctggcatgcca gttccagaccaccgcgacctcgacatcgagacccacagcctgaccatctgggatctggac cgtaccttcagcgtcggtggcttcggcggcaaggagaccatgaccctgcgcgaggtactg tcccgcctgcgcgctgcctacaccttgaaggtcggctccgaatacacccacatcctggac cgcgacgagcgcacctggctgcaggaccgcctcgaagccggaatgccaaagccaacccag gcagagcagaagtacatcctgcagaagctgaacgccgcagaggctttcgagaacttcctg cagaccaagtacgtcggccagaagcgcttctccctcgaaggtgcagaagctctcatccca ctgatggactccgccatcgacaccgccgcaggccagggcctcgacgaagttgtcatcggt atgccacaccgtggtcgcctcaacgtgctgttcaacatcgtgggcaagccactggcatcc atcttcaacgagtttgaaggccaaatggagcagggccagatcggtggctccggtgacgtg aagtaccacctcggttccgaaggccagcacctgcagatgttcggcgacggcgagatcaag gtctccctgactgctaacccgtcccacctggaagctgttaacccagtgatggaaggtatc gtccgcgcaaagcaggactacctggacaagggcgtagacggcaagactgttgtgccactg ctgctccacggtgacgctgcattcgcaggcctgggcatcgtgccagaaaccatcaacctg gctaagctgcgtggctacgacgtcggaggcaccatccacatcgtggtgaacaaccagatc ggcttcaccaccaccccagactccagccgctccatgcactacgcaaccgactacgccaag gcattcggctgcccagtcttccacgtcaatggtgatgacccagaggcagttgtctgggtt ggccagctggcaaccgagtaccgtcgtcgcttcggcaaggacgtcttcatcgacctcgtt tgctaccgcctccgcggccacaacgaagctgatgatccttccatgacccagccaaagatg tatgagctcatcaccggccgcgagaccgttcgtgctcagtacaccgaagacctgctcgga cgtggagacctctccaacgaagatgcagaagcagtcgtccgcgacttccacgaccagatg gaatctgtgttcaacgaagtcaaggaaggcggcaagaagcaggctgaggcacagaccggc atcaccggctcccagaagcttccacacggccttgagaccaacatctcccgtgaagagctc ctggaactgggacaggctttcgccaacaccccagaaggcttcaactaccacccacgtgtg gctccagttgctaagaagcgcgtctcctctgtcaccgaaggtggcatcgactgggcatgg ggcgagctcctcgccttcggttccctggctaactccggccgcttggttcgccttgcaggt gaagattcccgccgcggtaccttcacccagcgccacgcagttgccatcgacccagcgacc gctgaagagttcaacccactccacgagcttgcacagtccaagggcaacaacggtaagttc ctggtctacaactccgcactgaccgagtacgcaggcatgggcttcgagtacggctactcc gtaggaaacgaagactccgtcgttgcatgggaagcacagttcggcgacttcgccaacggc gctcagaccatcatcgatgagtacgtctcctcaggcgaagctaagtggggccagacctcc aagctgatccttctgctgcctcacggctacgaaggccagggcccagaccactcttccgca cgtatcgagcgcttcctgcagctgtgcgctgagggttccatgactgttgctcagccatcc accccagcaaaccacttccacctgctgcgtcgtcacgctctgtccgacctgaagcgtcca ctggttatcttcaccccgaagtccatgctgcgtaacaaggctgctgcctccgcaccagaa gacttcactgaggtcaccaagttccaatccgtgatcgacgatccaaacgttgcagatgca gccaaggtgaagaaggtcatgctggtctccggcaagctgtactacgaattggcaaagcgc aaggagaaggacggacgcgacgacatcgcgatcgttcgtatcgaaatgctccacccaatt ccgttcaaccgcatctccgaggctcttgccggctaccctaacgctgaggaagtcctcttc gttcaggatgagccagcaaaccagggcccatggccgttctaccaggagcacctcccagag ctgatcccgaacatgccaaagatgcgccgcgtttcccgccgcgctcagtcctccaccgca actggtgttgctaaggtgcaccagctggaggagaagcagcttatcgacgaggctttcgag gcttaa

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