Bordetella flabilis: BAU07_07715
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Entry
BAU07_07715 CDS
T04592
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03030
DNA replication
bfz03410
Base excision repair
bfz03420
Nucleotide excision repair
bfz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAU07_07715 (ligA)
03410 Base excision repair
BAU07_07715 (ligA)
03420 Nucleotide excision repair
BAU07_07715 (ligA)
03430 Mismatch repair
BAU07_07715 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfz03032
]
BAU07_07715 (ligA)
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_07715 (ligA)
Enzymes [BR:
bfz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BAU07_07715 (ligA)
DNA replication proteins [BR:
bfz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BAU07_07715 (ligA)
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BAU07_07715 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAU07_07715 (ligA)
MMR (mismatch excision repair)
DNA ligase
BAU07_07715 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAU07_07715 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
BRCT_2
Macro
Motif
Other DBs
NCBI-ProteinID:
ANN77014
UniProt:
A0A193GCK4
LinkDB
All DBs
Position
1759896..1761998
Genome browser
AA seq
700 aa
AA seq
DB search
MSADKASAAQEEIDRLRVEIEQHNYRYYVEDAPVISDADYDALMRRLMALEAEHPELVTP
ESPTQRVGATPLAALGAVRHAVPMLSLGNAFDEDEVRAFDKRVTDTLRAAGLLGPASQPD
YFCELKLDGLAISLRYENGKLMQAATRGDGQTGEDVTANIRTIRSIPLQLKQGAPRVLEV
RGEVLMNRRDFERLNQAQAEHGEKVFVNPRNAAAGSLRQLDPRITARRPLRFFAYGWGEV
HGLSGGQADRFDEPAPGTREVSTLPRESHGAMLEWLAQLGLPVNAQHNLRATGADGLLAF
YARVGKLRATLPYDIDGVVYKVDALPAQKVLGFVARAPRFALAHKYPAEEATTALVDIEV
QVGRTGAITPVARLQPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVVG
PILEKRPADAREFRMVTACPVCGSAIERPEGEAIARCTGGLFCAAQRKQTLLHAAGRKAL
DIEGLGEKLVDQLVERDRIKSLADVYSLRAEELAAYERMGTKSADNLVAAIDKARTPTLG
RLLFALGIRHVGESTARDVARHFGDMDAIMNATEEQLLEVPDVGPAVAASIHRFFAEPHN
RDIVEALKRQGVHPVAEAAARSGRLAGKTFVLTGTMPKWTRDDATRHILAAGGKVSGSVS
KKTAYVVAGEEAGSKLVKARELGVPVLDEDGLKQLLGVTE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctgacaaggcttcggccgcgcaggaagagatcgaccgcctgcgcgtcgagatc
gagcagcacaattaccggtattacgtcgaagacgcgcccgtcatttccgacgccgactac
gatgcgctcatgcgcaggctcatggcgttggaggccgaacatcccgagctggtcacgccg
gagtcgccgacccagcgggtgggcgccacgccgctggccgccctgggcgcggtccggcat
gcggttcccatgttgtccctgggtaacgccttcgatgaagacgaggtacgcgccttcgac
aagcgggtcaccgacaccttgcgtgcggccggcctgctgggtccggcaagccagccggat
tacttctgtgaactcaagctggacgggctggcgatcagcttgcgctacgagaacggcaaa
ctgatgcaggccgcgacgcggggcgacggccagaccggcgaagacgtgaccgcaaatatc
cgcaccatccgttcgatcccgctgcagctcaagcagggcgcgccacgggtactggaggtg
cgcggcgaagtcctgatgaacaggcgcgacttcgaacgccttaaccaggcccaggccgaa
cacggtgagaaagtgttcgtcaatccgcgcaacgccgcggccggcagcctgcggcaattg
gatccgcgcattacggcgcgacgtcccttgcgcttcttcgcgtatggctggggcgaggtg
cacggtctgtcgggcggccaggcggatcgcttcgacgaacccgcgcccggcacgcgcgag
gtctccacgctgccgcgcgaatcgcatggcgccatgctggaatggctggcgcagctcggt
ctgccggtcaatgcgcagcacaatctgcgcgcgacgggcgcggatggcttgctggccttc
tacgcgcgcgtcggcaagctgcgcgccacgctgccctacgacatcgacggcgtggtgtac
aaggtcgacgccttgccggcgcagaaggtgctgggcttcgtggcgcgcgcgccgcgcttt
gccctggcgcacaagtatcccgccgaagaagccaccacggcgctggtcgatatcgaggtg
caagtgggccgcaccggggccattacgcccgtcgcccgtctgcagcccgtcttcgtcggc
ggtgtcacggtcaccaatgcgacgctgcacaacgaggatgaaatccgccgcaaggacgtg
cgtatcggcgataccgtcatcgtgcgccgtgccggcgatgtcatccccgaggtggtcggc
cccatcctggaaaagcgtcccgccgacgcgcgcgagttccgcatggtgaccgcgtgcccc
gtgtgcggctcggcgatcgaacgcccggaaggcgaagccatcgcccgctgcacgggcggg
ctgttctgcgccgcccagcgcaagcagacattgctgcatgccgccggacgcaaggcattg
gacatagaaggcttgggcgaaaagctggtcgatcaactggtcgagcgcgatcgaatcaag
tcgctggccgacgtgtacagcctgcgcgcggaggagctggccgcctacgaacgcatgggg
acgaagtccgccgataatctggttgccgccatcgataaggcgcgcacgccgacgttgggc
aggctgctgttcgcactgggcatacgccacgtcggcgagagcaccgcacgcgatgtggcg
cgccatttcggcgacatggatgcgatcatgaacgccaccgaggagcaactgctggaggtg
cccgacgtcgggccggcagtggccgcctccatacaccggttcttcgccgaaccgcacaac
cgcgacatcgtcgaggcgctgaagcgccagggcgtgcatcccgtggcagaagccgccgcc
cgtagcggccgcctggcgggcaagaccttcgtgctgaccggcaccatgccgaaatggacg
cgcgacgacgccacccggcacatcctggccgctggcggcaaggtcagcggctccgtgtcg
aagaagaccgcttatgtggtcgccggcgaagaggcgggcagcaagctggtcaaggcccgg
gaacttggcgtgccggtcctggacgaagacggcttgaagcaattgctcggcgtgacggag
tag
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