KEGG   Bufo gargarizans (Asiatic toad): 122924538
Entry
122924538         CDS       T07965                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122924538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bgar03000]
    122924538
   04121 Ubiquitin system [BR:bgar04121]
    122924538
   03036 Chromosome and associated proteins [BR:bgar03036]
    122924538
Enzymes [BR:bgar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122924538
Transcription factors [BR:bgar03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    122924538
Ubiquitin system [BR:bgar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122924538
Chromosome and associated proteins [BR:bgar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122924538
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122924538
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like DUF7885 F-box JHD JmjC Cupin_8 LRR_At1g61320_AtMIF1 LRR_4 LRR_8 Rubredoxin
Other DBs
NCBI-GeneID: 122924538
NCBI-ProteinID: XP_044131678
LinkDB
Position
1:576056390..576306239
AA seq 1253 aa
MEAKKASGRRLRTISRTQYAESDDLSDVDDMVSIRGFSLEQKLSCNHYRGDYVQDMDGKD
FTYEYVQREALKVPLLFRTKDGLGIKMPEHDFTVRDVKLLVGSRRIVDVMDVNTQKATDM
SMSQFVRYYETPETEREKLYNVISLEFSHTKLEKVVKRPAVVDAVDWVDNMWPQHLKEKQ
KYTTNVISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVLRGGKVFWLIPPTVYNL
QLYEEWLLSGKQTDIFLGDRSQGCQRIELKQGHTFFIPSGWIHAVYTPADSLVFGGNILH
SFNIPMQLRVSEIEDRTRVHAKFRYPFYYEMCWYVLERYVCTLTKRCHLSKEFQKESMLF
DSERKHSTDSLSSDSWLEMEEESGDAHMLEDKDDHGDKVSKLSGDESLTPNSADGKESVE
KRQKTTLMQYLKRTLSNDSEESSKSIVHSDFPKTPSGSPSTEAGSRWTHLTEFELKGLKA
LVEKLESLPENKKSVPDGIENPHALLEDMKTVLKEHADDDQNLAISGVPVVSWPKKPAKN
RAVGRPKGKLSTSPAVKLSANRTSAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGP
GRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDCVEGQEAKFNVMLMECSICNEIIHPGC
LKSKESDGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKMNRD
NKELTELVKKKEREETPRQTPEEPPKKKILEGIVKRRPEDGVFKRKRPLEKNLDPTVKKR
LKHGKEEKLFKKKKRPWKTPEAIMAKTLKRIKQEPDDDLQEAVPKLKESDQSRSSSPTAG
PSTEGPELKEKKKNRRKRKVPKELSKELSKELNQEIQKTENSLANENHHPIKSEPESEDE
ETRKCNSNGERVHRFTKLNGTPKEYRHQSVPSPRSTPRVVTHPPPSLSPPKCMQMERHVI
RPPPISPPPDSLPLENGATHVMQREVWMAIFSYLSHRDLCICMTVCKTWNRWCCDKRLWT
HIDLNRCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLMNRLPALRELNLSGCSWIA
VSALCSSSCPLLRSLNVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNITELRLAGL
DITDASLRLMIRHMPLLSKLDLSFCNHVTDQSINLLTAVGTSTRDSLSEMNLSDCNKITD
QCLTYFKRCGNICLIDLRFCKQVTKESCEQFIAEMSVIVQFGQTEEKLLQKIS
NT seq 3762 nt   +upstreamnt  +downstreamnt
atggaggcaaagaaagcatcaggaagaagactgcggaccatcagccggacccagtacgcg
gagagcgacgatctgtctgacgtggacgacatggtcagcatccgcggctttagtctggag
cagaagcttagctgcaaccactaccggggggactacgtgcaggacatggacggcaaagat
tttacatatgaatatgttcagagagaagcacttaaagttcctcttctttttcgcactaag
gatggattgggtattaagatgcctgaacacgatttcacggtcagagatgtgaaactactg
gtgggaagccggcgcatagtggatgtgatggatgtgaacacacaaaaggccacagacatg
agtatgtcacagtttgtccgatactacgaaacacctgaaactgaaagggaaaaactatac
aatgtgatcagcctggagttcagccacaccaagctagaaaaagtagtcaagcggccagct
gtggtggatgctgtagattgggtggataatatgtggcctcagcatttaaaagaaaagcaa
aaatatacaacaaatgtgatttctgagatgaaatatcccaaagtgaaaaagtattgtttg
atgagcgtcaagggctgtttcacagactttcatattgattttggagggacgtctgtttgg
taccatgttttacgcggtggaaaggtattttggttgattcctcctacggtgtataatttg
cagctttatgaggaatggctgttatcagggaagcaaactgacatcttcttgggagaccga
tcacagggttgtcagaggattgaactgaagcagggacacaccttctttattccatcagga
tggatccatgccgtgtacactcctgcagactcgctggtgttcggaggcaacatactgcac
agctttaatattcccatgcaactccgtgtgtctgagatagaagacaggacaagggtgcat
gcaaagttccgttatcccttctattatgagatgtgctggtatgtcttggagagatatgtc
tgcaccctaacaaagcgctgtcaccttagcaaagaatttcaaaaggagtcaatgctattt
gattcagaaaggaaacacagtacagacagcttatcctcagattcttggttagaaatggag
gaagagtcaggtgacgcccatatgcttgaagacaaagatgaccatggagacaaagtatcc
aaattatcaggtgatgagtccttaacgcccaatagtgcagatggcaaagaatcggtggaa
aagagacaaaagactactttgatgcaataccttaaaagaaccttgtcaaatgactcggag
gaaagctcaaagtccattgtccacagtgatttcccgaagactccatcaggatctccatcc
acagaggcaggttctaggtggacccacctcacagagtttgaactaaaaggtctgaaagct
cttgtggaaaaactagaatctctccctgaaaacaagaaatctgtcccagatggaattgag
aatccacatgcacttttggaggatatgaagactgtgctcaaggagcatgcagatgatgac
caaaatctagccatttctggggtacctgtggtgtcctggcctaagaagccagccaagaac
cgagctgtgggaagaccaaaaggtaaactgtccacttctcctgccgtgaaattgtctgcg
aacaggacaagcgctggagcccgcagaagacggacacgatgccggaaatgtgaagcctgc
ctacgcacagaatgtggagaatgtcacttttgcaaggacatgaagaagtttgggggacca
ggacggatgaaacagtcatgtatcatgcggcaatgtatagctcccgtcctgcctcataca
gccgtctgtttagtgtgtggagaagcaggaaaggaggactgtgtggaaggccaagaagca
aaatttaacgtcatgctgatggaatgctccatctgtaatgaaatcatccacccaggttgc
ctgaagagtaaggaatctgatggtgtggtgaatgatgagcttccaaactgctgggaatgt
ccaaaatgtaaccatgctggaaagaccgggaaagcctacaagcaaaaaagaggtccagga
tttaaatacgcgtccaacctgcctgggtctctgcttaaggagcaaaagatgaatagggat
aataaagaattaacagaactggtaaaaaagaaagaacgggaagagacccccaggcagacc
ccggaggagccaccgaaaaagaaaattctggaaggcattgtaaaacgtcgtccagaagat
ggagtttttaagaggaaaagaccccttgaaaagaatctggaccccacagtgaagaaacgg
ctaaagcatggaaaagaagagaaactcttcaagaagaagaagagaccttggaagacacct
gaagcaattatggccaaaacattaaagcgcataaaacaggagcctgatgatgatttgcaa
gaggcagtcccaaaacttaaggaaagtgaccagtcaagatccagctcgccaactgcaggt
cccagcactgaaggtcctgagctaaaggagaagaagaaaaaccgaaggaaaaggaaagtt
cctaaagaactcagcaaagaattaagcaaggaactcaaccaagagatacaaaaaacagag
aacagcttggcaaatgagaaccatcatcccatcaaatctgaaccagagagtgaggacgag
gagaccagaaaatgtaacagtaatggggagagagtgcaccgattcaccaaactgaatggg
accccaaaggaatataggcatcagtctgtcccaagcccaagaagcacaccaagggtcgtt
acacaccctcctccttccttatcacctcccaaatgtatgcagatggagcgccatgtaata
aggcctcctccaatcagccctcctccagattccctccctctggagaatggtgcgacgcat
gtgatgcaaagagaggtctggatggccatctttagctacctcagccacagggatttgtgc
atctgtatgacagtctgcaaaacgtggaacagatggtgttgtgataaaagattgtggact
cacatcgacctaaaccgctgcaaatccatcactcctcttatgctcagtgggattatcaga
agacaaccagtgtccttagatttaagctggacaaatatatcaaagaagcagctcagctgg
ctgatgaaccggctcccagccctacgagagctaaatttatctggctgctcctggattgct
gtttcagcactttgtagctccagctgtcctttgctgagatccctcaatgtccagtgggtg
gaagggctaaaagatgcacagatgagggaccttctgtcacctccaacagacaacaggcca
ggtcagatggacaatcgcagcaaattgaggaatattactgagcttcgtctagcgggactg
gacatcactgacgcctctctacgcctcatgattcgtcacatgcctcttctttctaaactg
gatctgagcttctgtaaccatgttactgatcagtccattaatctgctcacagcagtgggt
acatctaccagggattctttatcagaaatgaatttatcagactgcaataaaattacagac
cagtgcctgacctacttcaaacgatgcggcaacatctgtctgatagacctcagattctgc
aagcaggttaccaaggagagctgcgaacagttcatagcagaaatgtctgtaattgtacag
tttggacaaacagaggaaaagctgcttcagaagatcagctaa

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