Bufo gargarizans (Asiatic toad): 122940379
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Entry
122940379 CDS
T07965
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122940379 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122940379 (EFTUD2)
Spliceosome [BR:
bgar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122940379 (EFTUD2)
Complex C
U5 SnRNP specific factors
122940379 (EFTUD2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
122940379
NCBI-ProteinID:
XP_044152958
LinkDB
All DBs
Position
6:complement(136717583..136758421)
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AA seq
974 aa
AA seq
DB search
MDADPYDEFGNYIGPELDSDDDDDDDDMGRDDRDVDVAEDDDDDEYIGDPDEDRPGMEVV
LHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKAKKFSMMEQGLPATVYAMDF
LADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKHHDQDLCYTDILFTEQERG
VGMKSTPVTIVLPDTKEKSYLFNIMDTPGHVNFSDEVTAGFRISDGIVLFIDAAEGVMLN
TERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSMYSTDENL
VLSPLLGNVCFASSQYSICFTLGSFAKIYSDTYGDIHYQEFAKRLWGDIYFNPKTRKFTK
KAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPQTLEDLGIHLTKEELKLNIRPLLRL
VCNRFFGEFTGFVDMCVQHIPSPKAGARAKIEHTYTGGMDSELGEEMSQCDPDGPLMCHT
TKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQVCTVGRLWVSVARYH
IEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPS
ELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNRKKLGEFF
QTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLSSVKDSIVQGFQWGTREGP
LCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQA
PADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSL
SVFHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPML
LELAKQDVVLNYPM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgacccatatgatgagtttggcaattacattggccctgagctggactctgat
gacgacgacgatgatgacgacatgggaagagatgacagggatgtagatgtggcagaagat
gatgacgatgatgaatacattggagatcctgatgaggatcgtccagggatggaggttgtt
cttcatgaggacaagaaatattaccccactgctgaggaagtgtatggtcctgaggtggaa
actatagtgcaggaggaggacacacagccactaacagaacctattattaaaccagtgaag
gcaaaaaagttctccatgatggaacaaggactgcccgccacagtgtatgccatggatttt
ttggccgatctcatggataattcagaactcattaggaacgtgacactttgtgggcacctt
catcatggaaagacctgttttgtggactgtctaattgagcaaacgcatcccgagatccgc
aagcaccatgaccaggatctctgctacaccgatatcctttttaccgaacaggagagaggc
gttggcatgaaaagtacacctgtgaccatcgttctgcccgacaccaaggaaaaatcctat
ctgtttaatataatggatactccaggtcatgtgaacttttcagacgaggtcacggctggg
tttcgaatatcagatggaattgtgttgttcattgacgcagcagagggggtaatgctgaac
acagagcgtctgatcaagcacgctgtacaggaacgtttagctgtcacagtgtgcattaat
aaaatagaccggttaattctggagctgaagctgccgcctactgatgcttattacaagctg
agacacattgtggatgaggttaatggattactgagcatgtattccacagatgagaacttg
gttttatccccactcctggggaacgtatgctttgcaagttcacagtatagcatctgcttc
acgctgggctcatttgccaagatctattctgacacatatggtgatatccattatcaagag
tttgccaagcggttgtggggtgatatctatttcaatccgaaaacgcgtaaatttaccaag
aaagctccaacaagcagctctcagcgaagtttcgtggagttcatcttggagcctttgtat
aagattttggctcaggtagtgggggatgtagatactactctgccacagacactggaagac
ttgggcatccatctcacaaaggaggaactgaagcttaatatccgaccactactgaggctt
gtatgcaatcgcttctttggggaattcacaggttttgtggatatgtgtgttcagcacatt
ccatctccaaaggctggtgcaagagccaaaattgaacacacctatactgggggtatggat
tctgaactaggagaggagatgagccagtgtgatcctgatggtccgctgatgtgtcataca
accaagatgtacagcacagatgatggagtacagtttcatgcctttggccgtgtgctgagt
gggactattcatgctgggcagccagttaaggtactgggtgagaattatactttagaagat
gaggaggattcccaggtctgcacagttggaaggctgtgggtgtctgtggccaggtaccat
attgaagtgaatagagtaccagccgggaattgggttctgattgaaggtgtggatcagcct
atagtaaagacagccacaatcacagaacctaggggcaatgaggaggctcagatcttccgg
ccattaaaattcaacaccacatcagtcattaaaattgctgtggagcccgttaacccgtca
gaactgccaaagatgttagatggacttaggaaagtcaacaagagctatccttctctcacc
accaaggttgaagagtctggggagcatgtcattcttggcactggagagctgtaccttgac
tgtgttatgcacgacctccgcaaaatgtactcagaaattgatattaaggtggcagatcct
gtggtgactttttgcgagactgtagtggaaacatcatcactgaaatgttttgctgagacc
ccaaataagaaaaataaaatcacaatgattgctgagccgttggaaaaaggcctggctgaa
gatattgaaaatgaggtggtgcagatctcctggaacaggaagaaattgggagaatttttt
cagacaaaatatgactgggatcttctggctgcccgttctatctgggcttttgggccagac
accactggtcccaacatcttggtagatgacacattgccttctgaggtggataaagctttg
ctgagctcggtaaaggacagcattgtacagggattccaatgggggacaagggaaggcccc
ttgtgtgatgagttgatcagaaatgtgaagtttaaaatactggatgcggtcattgcgcag
gagccattgcatcggggaggtgggcagatcattccaacagcccgcagagtagtatactct
gctttcctgatggccactccacgtctcatggagccgtattactttgtggaagtgcaagct
cctgctgactgtgtgtctgctgtgtatactgttctggccagaagaagaggccatgtcaca
caagatgctcctattcctggttcaccgctctataccatcaaagcattcatcccagcaata
gactcatttggttttgagacagatctgcgcactcacactcaaggacaggctttctccttg
tctgtctttcatcactggcagattgtgccaggagaccccttggataaaagcatcattata
cgaccactggagcctcagccagcacctcaccttgcccgagaatttatgatcaaaacaaga
cgtaggaagggtctaagcgaagatgtaagcatcagcaagtttttcgatgaccctatgttg
ttggaattggccaaacaggatgtagtgctgaactatcccatgtga
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