Bufo gargarizans (Asiatic toad): 122940894
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Entry
122940894 CDS
T07965
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bgar04040
]
122940894 (SCN4A)
Ion channels [BR:
bgar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122940894 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
UPF0147
DUF1492
Motif
Other DBs
NCBI-GeneID:
122940894
NCBI-ProteinID:
XP_044153721
LinkDB
All DBs
Position
6:complement(140973472..141127747)
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AA seq
1823 aa
AA seq
DB search
MAIKMLPPGPDSLQRFTKESIAKVEKRIEEEEIRKAKQIEVLEDVVLKPNIGLEAGKNLP
LIYGDPPPELIGVPLEDLDPFYSNQKTFIVLSKGKAIYRFTATKALYLLDAFNLLRRGAI
KVLIHSIFNFFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKIFARGFCIDS
FTFLRDPWNWLDFCVIVMAYTTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQ
SVKKLADVMILTVFCLAVFALIGLQLFMGNLRQKCVYWPPPEEAYEYYRNLTISSMNLDF
DDNSTLYNNTDLFANVSIDWTTYLNDESNFYYLDGALDALLCGNSSDSGRCPESYTCMKT
GRNPNYGYTSYDSFNWAFLALFRLMTQDYWENLFQLTLRSAGKTYMVFFVLVIFLGSFYL
INLILAVVAMAYAEQNEATMQEAIEKEREFQEMLEQLKKHQEEQGQRKASMASVGLINEE
RKKSTELGIAKEDREKDCNGREIPRVVIEAVDSEDDVTSVKNDLEKNSKKYLDEPTLQHK
IGSSASIVSEAMIEELEEAHQTCPPWWYKFSHTFLIWDCCKLWVKFKEYVRFVVMDPFVD
LGITICIVLNTLFMAMEHYPMTKQFENVLSNGNLVFTGIFAAEMFFKVIALDPYYYFQVG
WNIFDSIIVTLSLVELGLANVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSIGALG
NLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINSDCVLPRWHMHDFFHSFLIVFRILCGE
WIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLSASDDDGEINN
IQIAIGRITRAIDFVKKTAVSLLPFMKTVQNKEEEEDNNEDVNKESIALNHIETEEEPKP
ESPVDGLVKKPRYIMTELDHMNLINNPHYRIEVPIASEESDLDVPDTDEFSTQSEFEEMV
IKPKKKFDDGSSMGSTADYRPPDPEDEEEALNHKDEEGPEECFTEACVRRFPFLYVDIKT
EKGRLWWNIRKTCFKIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKFIKIMLEYADKV
FSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCIN
TTTSELFDISVVNNRSDCFALNYTEEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMY
AAVDSRNIEDQPVYEINLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIF
MTEEQKKYYNAMKKLGSKKPVKPIPRPENPIQGAVFDFISKQAFDIFIMILICLNMITMM
IETDDQSKEKVNILFQINLVFIVIFTTECVLKMFALRYYFFTIGWNIFDFVVVIISIAGI
VLSDLIAEYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSMICLFEITTSAGWDGLLNPILNSGPP
DCDPHAENPGTAVRGNCGNPSMGIMFFCSYIIISFLIVVNMYIAIILENFNVATEESGEP
LCEDDFEMFYETWEKFDPDASQFVEYSRMSDFVDTLQEPLRIAKPNKIKLITLDLPMVTG
DKIHCLDILFALTKEVLGDSGEMDALKASMEEKFMAANPSKVSYEPITTTLKRKQEEVCA
IKIQRAFRRHLLKRSVKQASYVYRHSQDLDSTVEDPPEKEGLVANRINTTYGHLEDGGTN
GTQHPHLTNRFSRSSDDVRKSDV
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaaaatgcttcctcccggccctgacagcctgcagcgatttaccaaagagagc
attgcaaaagtagaaaagcgaattgaagaggaagagatccggaaagccaaacagattgag
gttcttgaagatgtggtacttaaacccaacattggcctggaagctgggaaaaatctacca
cttatttatggtgatccaccgccggagcttattggggtccccctagaagatttggatcct
ttttatagtaaccaaaagacgttcattgtcctgagtaagggtaaagcaatatatcgtttc
actgccaccaaagccttgtacctactggacgctttcaatctattaagaagaggagctatc
aaagtgctgatccactcaatattcaatttttttattatgataacaattttaacaaattgt
gttttcatgactatgagtgacccaccaccttggtctaaaaatgtggagtacacattcaca
ggcatttacacttttgagtctttgataaagatctttgcccgagggttttgcatcgacagt
tttacattcctcagagacccatggaactggctggatttttgtgtcattgtgatggcttat
accacagagtttgtagatctggggaatgtatctgctctaaggacattccgtgtcctccgt
gcacttaaaacaatcactgtaattccaggcttgaagaccattgttggagccctcattcaa
tctgtgaaaaagctggcagatgtaatgattctcactgtcttctgtttggccgtctttgca
ctaattggtcttcagctatttatgggaaatttgagacaaaagtgtgtctactggccgcca
ccagaggaagcatatgaatattacagaaacttgacgataagttcaatgaatttggatttt
gatgacaactcaaccttatacaataacactgacctgtttgccaacgtatccatagactgg
actacctacctcaatgatgagtctaacttttactacttggacggagcactggatgctctt
ctgtgtggaaacagcagtgattccgggagatgcccagaaagctatacatgtatgaagact
ggaagaaatcccaactatgggtacaccagttatgactcattcaactgggcctttttggca
ctgttcagactgatgactcaggactactgggagaacctgtttcaactgaccctccgatct
gcgggtaaaacatacatggttttcttcgttctggtgatattccttggctcattttatctt
atcaaccttatccttgctgtggtggccatggcttatgccgagcagaatgaagccaccatg
caggaagccatagaaaaggagagagaattccaagagatgctggaacagctaaagaaacat
caagaagaacaaggtcaaaggaaagccagcatggcctcggtaggacttatcaatgaagaa
aggaagaaatccacagaactaggtatagccaaagaagacagagagaaggactgtaacgga
cgagagatacctcgagtggtgatagaggcagttgattctgaagatgatgtcacctcggta
aagaatgatcttgagaaaaactccaagaagtatttggacgaaccaacattgcaacacaaa
ataggcagttctgctagtatcgtctctgaagccatgatagaagaactagaggaggctcac
cagacgtgtccaccttggtggtacaagttttcacacacttttttgatttgggactgctgt
aaactctgggtgaagttcaaggagtatgtacgatttgtggtcatggatccttttgtggac
cttgggatcactatctgcattgttctcaacacgcttttcatggctatggagcattatcca
atgactaaacagtttgagaatgtgcttagcaatggaaacctggtttttactggtattttt
gcagctgaaatgttcttcaaggtgattgccttggatccatattactatttccaggttgga
tggaacatttttgacagcataatagtcaccctgagtttggtggaacttggcctggctaat
gtggatggtctgtcagtgttgcgttccttccgtctgcttagggtcttcaaacttgctaag
tcttggcccacactaaacatgctcatcaaaatcattggtaactcgataggcgcccttgga
aatctcacactggtcttggccatcatcgtcttcatctttgcagtggtgggaatgcagctt
tttgggaagagctataaagagtgtgtttgcaagatcaactcagactgtgttcttcctcgg
tggcacatgcatgattttttccactctttcctcattgttttccgaatcctgtgtggggag
tggatcgagactatgtgggactgtatggaggtggcaggacaagccatgtgtctcactgta
tttatgatggtcatggtgattggtaacttagtggtgttgaacctattcttagctttgttg
ctgagctcctttagtgctgacaacctctccgcctctgatgatgatggggaaataaacaac
atacagattgccatagggaggattactagggccatcgactttgtcaagaaaacggctgtt
tccttgctaccattcatgaagacggtgcagaataaggaggaagaagaggataataatgag
gatgtaaataaagagagtattgctctgaaccacatagagactgaagaggagcccaagcct
gaaagtccagttgatggcctggtgaaaaagccacggtacatcatgacagaattagatcat
atgaacctgattaacaacccacactacaggatagaagtgcccatagcatctgaagagtca
gatctggatgttcctgatacggatgagttcagtactcagtcagagtttgaggagatggta
ataaaacccaagaagaaatttgatgatggctcttcaatgggtagtacagcagattataga
cctccagatccagaggatgaggaagaagctcttaaccataaagacgaggaaggcccagaa
gaatgttttacagaagcatgcgtacgaagatttccatttctgtatgttgacatcaaaact
gaaaagggaaggctttggtggaacattcgtaaaacctgtttcaagatagttgaacataat
tggtttgaatccttcattatcttcatgatcctgctcagtagtggagccttggcatttgag
gatatctacattgaacagagaaaatttatcaaaattatgttagaatacgctgataaagtc
ttctcttatgtgtttgtgatcgaaatgttgctgaagtgggtggcatatggcttcaaagtt
tatttcaccaatgcttggtgctggctggattttctcattgtggatgtatcgttgatcagt
ttgactgccaactggttgggttattcagaacttggtgccatcaagtccctaagaactttg
agagccctcagaccactgagggcattgtcaagatttgaaggcatgagggttgtagtcaat
gccttgttgggcgccattccttccatcatgaacgtgctactggtttgtctaatcttctgg
ctgatcttcagtataatgggcgtcaacctgtttgctggaaaatattatcgatgtatcaac
accaccacatcggaactctttgacatttctgtagtgaacaatcgctcggactgctttgct
ttaaattacactgaagaagtgcgatgggttaatgtcaaagtgaattttgacaatgtgggt
cttggatacttatccctattgcaagtggcgacatttaaaggttggatggatatcatgtat
gcagctgtggactcaaggaatattgaggaccaacccgtgtatgaaattaacctctatatg
tacctgtactttgtgattttcatcatatttggggctttcttcactttaaacctttttatt
ggtgtcatcatagacaattttaaccagcaaaagaaaaagtttggaggtaaagatatcttc
atgactgaagagcagaaaaaatactacaatgccatgaaaaaactgggttcaaagaagccg
gtgaaaccaatacctagaccagagaatccgatccaaggagctgtctttgattttatctcc
aagcaagcttttgacatctttattatgatcttgatttgccttaatatgattacaatgatg
attgagacagatgaccaaagtaaagagaaagtaaatatacttttccaaatcaaccttgtg
tttattgtcatcttcactacagagtgcgtccttaaaatgttcgcactgaggtattacttc
ttcactatcggatggaatatttttgattttgtggtggtcatcatctctatagctggtatt
gtcctctcagacctcatagcggaatactttgtgtcaccaacactttttagagtgatccga
cttgcaagaattggaagggtccttcgactcattaaaggagctaagggaatccgtactctt
ctgtttgctctgatgatgtctctcccagccctattcaatattggtctactattgttttta
gtgatgttcatttactcaatatttgggatgtctaacttcgcctatgtgaagaaggaatct
ggcattgatgatatgtttaattttgagacatttgggaatagtatgatttgcttgtttgaa
ataaccacctcagcaggatgggatggacttctgaatccaattctaaacagtgggccaccg
gactgtgatcctcatgcagagaaccctggaacagctgtgcgtgggaactgtggaaatcca
tccatgggcattatgtttttctgtagttatatcattatctcgtttttgattgtagttaat
atgtacattgccattatccttgagaattttaatgtggccacagaagaaagcggtgagccc
ctatgcgaggacgattttgagatgttttatgaaacttgggagaaatttgatcctgatgca
agtcagtttgttgaatacagcagaatgtcagattttgtggatactttacaagaaccatta
cggatcgcgaaacccaacaaaattaaactgattactttggacctccctatggtaactgga
gataagatacattgcttagacattttatttgcattgactaaagaagtgctgggagactct
ggagaaatggatgctctaaaagcctcaatggaggaaaaatttatggcagccaatccttcc
aaagtatcttatgaaccaatcactaccactttgaaacggaaacaggaagaagtatgtgcc
atcaaaatccagagggctttccgtaggcatctactgaagcgttcagtaaaacaagcctca
tatgtctaccgtcatagccaagatttagactcaaccgttgaggaccctccagagaaagaa
ggtttggtggcaaacagaataaacactacctatggacatcttgaggatggaggaaccaat
ggaactcaacatccacatttaactaacaggttttcacgcagcagtgatgatgtaaggaag
tcagatgtttag
DBGET
integrated database retrieval system
