Bufo gargarizans (Asiatic toad): 122942160
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Entry
122942160 CDS
T07965
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bgar03037
]
122942160 (PCDH15)
04515 Cell adhesion molecules [BR:
bgar04515
]
122942160 (PCDH15)
Cilium and associated proteins [BR:
bgar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122942160 (PCDH15)
Cell adhesion molecules [BR:
bgar04515
]
Cadherins
Protocadherins
122942160 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122942160
NCBI-ProteinID:
XP_044155596
LinkDB
All DBs
Position
6:302602046..303986540
Genome browser
AA seq
2088 aa
AA seq
DB search
MNILLTADWQYEDCELARSGPPATIVAIDEESRNGTIIVDNMQIKGTAAGLSPTIQLTLI
ENVDYWVILDPIKQTLYLNSTGRVLDRDPPMSIRTFGVKIQCTNLKVGSIITHEVRVVVR
DRNDNSPQFMQNRYFTSVNELTPVGTTIFTGFSTNGATDIDDGPNGQIEYFIIFNPNDTA
TNQTFDIPLTLSGAVVLRRRLNYEEKKQFFVIVQANDRPLNPNERRTSTATLIVQVLDGD
DLGPRFLPCNMVTNTRDCWPITYRASIPELSPPAKVNPVNVTPPIQAEDQDMDILPIFDR
PGILFSILIGTPEDYAQYFHMNRTTAALTLLKPVNRDLHQKFDLVIKAEQDNGHPLPAFA
NLHIDILDENNQAPYFTFSTYEGYILESSPVGTTISENQNLTVPLRFLALDNDIEETKDP
QLYLYLTDYSTVFSVTQTGITRHITLLQPVDRERQQLYKFSLVASDGTQESSPVTVNIIV
IDANDNTPTFSSISYNIKIYTDMAPGESIIKLTAVDADEGANGQIIYEILAGAQGQFVIN
SKTGVITITPGVILTVGESFALTVRASDNAPLAQRRSSITTVYIEVLPPNNQSPPRFAQL
MYNLEVSEAMRIGAILLNLQATDREGDPITYLIQNGDPQRVFNLSVSSGLLILAKALDRE
STDRYILIVTASDGRPDGTSTATVNVVVTDVNDNDPVFDPYLPRNLSVQEEEANAFVGQV
RATDPDAGVNGQVRYSLANLNNVFRITSNGSIYTSVKLDREIRDYYELIVEATDGALTDS
RRSTITLAIKVIDIDDNTPVFTNASYAVSVPENMMPGTVFLKVQARDADLGANVTYRIRN
QEVLQLFQINSSTGELSLLKLLDYESFTGKEAVYIFLVEAFDAMGSMPPGIATVTVRVKD
MNDFSPVFTKAIYWGMVAPDAMKGTVIVTVVAEDHDPPGTPASLVRYKVDVSVFPYSASI
FDVEENTGRVITRVNLNEDPSTIFRLVVIAYDDGDPMKSNNTMVIITVLQPSIIPRFTQD
EYRAPPVSETAPIGTTVTVVMAAAINQTIVYSIISGNDQGMFAIDNMTGVISVVKPLDYE
NTTSYELRIQADSMQVARFNLRAASKSNTAIVYIEVQDENDHAPQFSKKLYLGGVSEDAR
MFASVLKVKVSIEIQRKNYHFILERYVQDQIPGAAVVVESIGARRFGEGFSEEDYTQCDL
MIYAVDPQTNRAISRNELFKFLDGKVLDINKEFQNYIGLGGRILEIRTPDVVANVKKQAQ
AVGYTEGALLALAIIIILCCIPAILIVMVSYRQFKERQAECAKTARIQMALPAGKPSTPA
ANNLYEELGDSTMFHLFLLYHFQQSRGKKTVLQEGDRQRLISNMASRAIEAHKQSCISGC
LNNNLPKSSSNITFLSDTNPLTTQNPLYIEGGSQSSVNLGLLWKNKFALDKSSPRRRLLK
DPTVKGSLKGLHRSWTLPSRFVKKNIYEVLESPVIMDPVQYQAGCGTDEALKNKEYFKTS
LDTSPNGKLSVKEQARQFEQNAFGDVKTGKPWEFKEIELSCNNDDCTDKNVQLLTEIDQA
CHSSSLTQNSHMASTCQMSLFPSILVTPSELPEEISPPPTRKPTPPLFRKNTTACHEFQA
AECEQAIPDIIPDPPNIPPPSPPPKKSQSQSPIQSSLHLSVPTSPSCSTPPPPPLPAPSL
PPSFSPFPTLPTPPPLPEKLLSPSQSYPSIATISPLPLSSAREKLIPIKMPPPEASHSDA
GPRRELKGILKNLHNLADIEKSVANMYSQIDKGNALSKQGTKPKSPVPTDIQNADNVRTH
ERLNGNLSCVVGELEKRFPSQSTALRGYAHQEQQQLLRPSLLKPEELSMESGIDPGQEYY
GQDYYSYEHGYELPQYGSRRRLLSPSGMYDDYGEVVVENDEEQSEESMARKKRIKFVVDR
EYETSSTGEDSAPESQRNRLNQPNIQNNVNGNIYIAQNGSVVRTRRSCFTNNLKMASPSR
LGKHFKKLEKLGVTHEENIQLNTLSKGASIKHNTRPSSISLASSTGVTKNIISKIGDNKL
KSTDEQESVVDNEDIKEPLEFHSDQTQSDEEELWMGPWNNLHIPMTKL
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacttttgactgcagactggcaatatgaggattgtgaattggccagatctggt
ccaccggcaactatagttgctatagatgaagaaagcaggaatggaacaattattgtggac
aatatgcaaatcaaagggacagctgcaggcctttcccctactatccaactcaccttgata
gaaaatgtggattactgggtgatattagatcccattaaacagacactatatctcaacagc
actgggagagtcttggacagagatccaccaatgtccatcaggacctttggtgtcaaaatt
caatgtacaaatttaaaggttggaagcatcattacccatgaagtgcgagtagttgtgagg
gacaggaatgataattcaccacaatttatgcaaaaccgctacttcacatcagtcaatgag
ctaacacctgttggtaccacaatctttactggcttttcaactaatggcgctacagacata
gacgatggtcctaatggtcaaattgaatacttcatcattttcaatcccaatgatacagcg
acaaaccagacgtttgacatcccactaaccctgtctggagctgtggtattgcgtcggagg
ttgaattatgaagaaaagaaacaattctttgtgatagttcaagctaatgatcgtcccctc
aatcccaatgaaagaagaacaagtacagctaccctgatagttcaagtccttgatggtgat
gaccttggtccaaggttccttccttgtaatatggtaacaaacacccgagactgttggcca
ataacctacagagcaagcataccagaactgagtcctccagcaaaagtgaatccggttaat
gtcacaccacctatacaagctgaagatcaagatatggatatattaccaatttttgaccgc
cctggaatacttttctccatacttattggtactcctgaggattatgcacaatatttccat
atgaatcgtacaacggctgcgcttacactcctgaaaccagtaaacagagatttgcaccag
aaatttgatttggtgattaaggcagaacaagacaatggccatccactcccagcatttgcc
aatcttcatatagacatcttggatgagaacaaccaggctccatatttcactttttcaaca
tatgagggttatatcctggagtcttctcctgttggaacaactatctccgaaaatcagaac
ttaaccgttccattgagatttttagctctggataacgacattgaagaaacaaaagaccct
caactctacctgtatttaacagactacagtacagttttctctgtaacacaaactggaatt
actcggcatatcactttgcttcagccagttgaccgtgaacgtcagcagctttacaaattt
tcattagtggcttcagatggtactcaagaaagttctccagtcactgtgaacattattgtt
attgatgctaatgacaacaccccaactttttccagcatctcctataacatcaagatctat
acagacatggcacctggcgagagcataataaaacttacagctgttgatgcagatgaaggt
gcaaatggtcagattatatatgaaatcctagctggagctcaaggacagtttgtcattaat
agcaagacgggggtcatcaccattactcccggagtcattttgactgttggggagtcattt
gctcttactgtaagagcttctgacaatgctcctctagcacaaagaaggagctccattact
actgtttatattgaggttcttccaccgaacaaccagagtcctccacgctttgcacaattg
atgtacaatcttgaagtcagtgaggcaatgcgtattggagctattcttctaaatctgcag
gctacagacagagaaggagatccaattacttatttaatacaaaatggagatcctcaaaga
gtcttcaacctatctgtaagctctgggcttttaatcttggcaaaagctttagacagagaa
agtacagatcgctacattttaatagtgacagcatcagatggccgccctgatggtacatca
actgctactgttaatgtggtggtgacggatgtgaatgacaatgacccggtctttgatcct
tacttgcctagaaatctctcagttcaagaagaagaagcaaatgcttttgtcggtcaagtc
agggcaacagatcctgatgctggagtcaatggtcaagttcgttacagcctggcaaacctc
aataatgttttccggatcacatccaatggtagtatttatacgtctgtaaagctagacagg
gaaataagagactattatgaactgattgtggaggcaacagatggagccctcaccgactct
cgacgttctacaataacactggctattaaggttattgatattgacgacaatacccctgta
tttacaaatgcctcatatgccgtctctgtaccggagaacatgatgccaggaacagttttt
ctaaaagttcaggcaagggatgctgatcttggcgctaatgtaacttatcggataagaaac
caggaagttttgcagctttttcaaataaactcgtcaacaggagagctatcgcttttaaaa
ctactcgactatgaatcattcactggcaaggaggctgtatatatatttcttgttgaagct
tttgatgccatgggaagcatgcctcctggaatcgctactgtaacagtgagagtaaaggat
atgaatgacttctcacctgtatttaccaaagccatctactggggaatggtggctccagac
gctatgaagggcactgttattgttacagttgttgctgaagatcatgatcctccgggtacg
cctgcaagtcttgtgaggtacaaggtggatgtgtccgtatttccatatagtgctagtata
tttgatgtagaggagaatactggtcgagttataaccagggttaatctcaatgaagatccc
agcacaatattcaggctggttgtgatagcttatgatgatggcgaccccatgaaatctaat
aacacaatggtaataataacagttctgcagccatctataatcccacggttcactcaagat
gaatacagagcacctccagtgagtgaaactgctccaattggcactacagttactgtggta
atggctgcagccataaaccagactattgtgtactctatcatctcagggaatgatcaaggt
atgtttgccattgataacatgacaggggttatctctgttgtaaagccactggactatgaa
aatactacaagctatgaactcagaattcaagctgattctatgcaagtggctagatttaat
ctacgagcagcttctaaaagtaatacagctatagtatacattgaagtgcaggatgaaaat
gatcatgcaccacaattttcaaaaaagctttatctgggtggagtgtcagaagatgccaga
atgtttgcatcagtgctcaaagtgaaggtaagcatagaaattcagaggaaaaattaccat
tttattttagaacgttatgtccaagaccaaatcccaggagcagcagttgtagtggaatcg
attggagccagaaggttcggagaaggtttttcagaagaggactacactcagtgtgacctg
atgatttatgctgttgatccacaaactaaccgagcaatatcccgtaatgaactttttaaa
tttttagatggcaaagttctcgacataaataaagagttccagaactatattggccttgga
gggcgtatcttggagatccggaccccggatgtagtagccaatgttaagaagcaagctcaa
gctgtaggctacacggaaggagctttgcttgcactggctattattatcatcctctgctgt
ataccggcgatattaattgtgatggtcagctacagacagtttaaagagaggcaagctgag
tgcgcaaagacagcaaggatccagatggcactgccagcaggaaaaccatcgactcccgct
gccaataatctgtatgaagagttgggtgacagcactatgtttcatctttttcttctctac
cattttcaacaaagcaggggaaaaaaaacagttttacaagaaggtgaccgacaaaggctc
ataagcaatatggcttcccgtgccattgaagctcacaaacagtcttgtataagtggatgt
ttaaacaataaccttccaaagtcatcaagtaatattacctttctttctgatacaaaccca
ctaactactcagaaccctttatatatagaaggtggaagccagagctctgttaatctcggg
ttactgtggaaaaataaatttgctttagacaagtcttcacctcgaagaagactgctaaaa
gatccaacagtcaaaggcagtttaaaaggactgcatcgttcttggacacttccttcacgg
tttgtcaagaaaaatatttacgaagtacttgagagtcctgttattatggatccagttcag
tatcaagcagggtgtggaacagatgaagccttgaaaaacaaagaatattttaaaacatct
ctagacacctcaccaaatggtaaactaagtgtgaaggaacaggcgaggcagtttgagcaa
aatgcatttggtgatgtgaagacaggaaaaccttgggaatttaaagaaattgaattgtca
tgtaataatgatgattgcacagacaaaaatgtgcaacttttgacagaaattgatcaggca
tgtcattcttcatcactgacacagaattcacacatggcttcaacatgccaaatgtccctt
tttccttccattctagtcactccctcagaattacctgaagaaatctctcctccaccaaca
cgaaagccaacaccaccattattcagaaaaaatacaacagcttgccatgaatttcaagct
gctgaatgtgaacaggcgattccagatattattcctgatccaccaaatattcctcctcca
tctccaccacctaaaaaatctcagtcgcaatcccccatacaatcctcacttcatctttct
gtcccaacaagcccttcttgctctacaccacctcctccaccccttcctgctccatctctc
ccaccttcattttcaccatttcccactttaccaactccaccaccacttccagagaagctt
ctctctccaagccaatcttacccatctatagctacaatatcccctctaccattaagcagt
gccagggaaaagcttataccaataaaaatgccaccaccggaagcctcccattcagatgct
ggccctagacgagaattaaagggaattcttaaaaatttacataacttagcagatattgaa
aaatctgtagctaacatgtatagtcaaattgacaaaggaaatgcattatcaaagcaagga
accaaacccaaatcacctgtaccaacagacattcaaaatgcagacaatgtacgtacgcat
gaaaggcttaatggaaacctaagttgtgttgttggggagttagaaaaaagatttccttct
caatccacagcactgagaggatatgcacatcaagagcaacagcaattgctgagaccatct
cttctgaagcctgaggaattgtctatggagtctggaattgatcctggccaagaatattac
ggacaagactattatagctatgagcatgggtatgaattgccacaatatggaagtcgacga
aggttactatcaccatctggaatgtatgacgactatggagaagttgttgttgagaatgat
gaagaacaaagtgaagaatctatggctagaaagaagagaatcaaatttgttgtggatcga
gaatatgaaactagctccactggagaagacagcgctcctgaatcccaacggaatcgtctg
aaccagccgaacattcaaaacaatgtcaatgggaatatttacatagcccaaaatgggtct
gttgttagaaccagacgttcttgtttcacaaataatttaaaaatggcatccccttcaagg
cttgggaagcattttaagaaactagaaaagcttggagtaacacacgaggaaaacatccaa
ctgaacacattatctaaaggagcctctatcaaacataacactaggccatctagtatatca
ctggcctctagcactggagtgaccaaaaatataatatccaagattggggacaataagtta
aaaagcacagatgaacaggaatcagttgtcgataatgaagacatcaaagagccattggaa
ttccacagtgaccagacgcagtcagatgaagaggagctctggatggggccgtggaacaat
cttcacataccaatgacaaaactatga
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integrated database retrieval system
