Bufo gargarizans (Asiatic toad): 122942380
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Entry
122942380 CDS
T07965
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03440
Homologous recombination
bgar03460
Fanconi anemia pathway
bgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122942380 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
122942380 (BRCA1)
03460 Fanconi anemia pathway
122942380 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bgar01009
]
122942380 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122942380 (BRCA1)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122942380 (BRCA1)
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122942380 (BRCA1)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122942380 (BRCA1)
Protein phosphatases and associated proteins [BR:
bgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122942380 (BRCA1)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122942380 (BRCA1)
Multi subunit type E3
BRCC complex
122942380 (BRCA1)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122942380 (BRCA1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122942380 (BRCA1)
BRCA1-A complex
122942380 (BRCA1)
BRCA1-B complex
122942380 (BRCA1)
BRCA1-C complex
122942380 (BRCA1)
BRCA complex
122942380 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
122942380 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_assoc
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-Nse
RING_XB3-XBAT31
BRCT_2
zf-RING_10
zf-RING_6
zf-ANAPC11
zf-MIZ
Prok-RING_4
DUF2018
Sina_RING
Motif
Other DBs
NCBI-GeneID:
122942380
NCBI-ProteinID:
XP_044155892
LinkDB
All DBs
Position
6:complement(105829923..105964850)
Genome browser
AA seq
1651 aa
AA seq
DB search
MTCATMDVEDIHNVLSVMQKNLECPICLDLMKEPVATRCDHIFCRFCMLQLLGKKKKGRA
ECPLCKKEVTKRSLQDSPRFKLLVNGLLKIINAFELDSGYKFFPSQDYASTVAASHKETL
KKDDQPVVQSTGYRNRTRRGILNGGPYEDHLSLLETSADTPLARDADTWNCKQPKRQKKD
TKQLITDLVSDSSEDDLFKRAGSLGSFAGEPNMSCEPLVSLDSEKKEDSPMANEATDQVP
SKLESEDVAASDLAEYGFSERDLESLRSNLLSIEGVRTLRESPSEKSAVVRDPLLSDKDF
CQKVGEQGSHRKLDENVGSSKLTEHNARMQMERQPSSESQTLKIAIDFQYDREDSTPENM
GSTQGSPRDASCAVSRERVKKSIKKVNEWLLKTDDLLYNSRDVELLTDVSQIEDPDASDK
ASNVSDETEIMAVSHRHVVADAVEKSMVSAEDRIFGRVYKREKKPSLVGKVTCVADVHVD
GVGGSLKVNEVPKIATLKPKRSAGLLPEHFIKRVDEKEGNDDSIVSGAVVVDDFGLDVEI
SQLKASNALLDADKIEVIGPDLETFSDAQSNKPKKQKKPLKRKSEKTKRTQMIQTLHLTK
GTDVDSCQQQSPHLSEVKIDSYPSSTELGHEVNQKNVRRSKRLNLFKENDFPFCSNQMVA
VMNIKDNRAEGPPIQNPPDNMPTLVNCEEPCLDSAVLEDPGPQINGKSPDAVQNGTIVVN
GSSHMKCDSPHVAREMCNGSSPMPKQDAEPVVNAVDVEDSDLDTQLLLKTFKSAKRMSFK
LDPVTETANNDNCDLMDICEINTSLTNKQGKNEKCKSEENQCNGQEIQPEHSRKLRSKKN
SRLSSKHNGMSSAENTESVIVLTTKTIKADDVEPLENCNPAKNAAVSKIKGSPLLLETET
ISLYPIVTHQNSAAAKRGDTRSRTAQGENEQAKNDCYQNCSFDEEQANQITSSNSSQGSW
TGKLLGHAVSHNRSPEVDSETPDGLLGSVDGLQKDTSYCAVAEKSFVFGADKKSQLLDRP
VSPVIQSQVVRSRKRRVQKLESSEEESSGDEELPCLNILFGNASTVADPKNTSASSSPKQ
QGGGVLAMFSSCSTSSKTQTSFNLPRNALVCSQESQCSVNLFSSQSNTSDHSMNGATGTH
NQHRTQESSPKRARVEVYGNEDKMTNLENEGEEMTIVENDCEDPCQEHNLGDVSGCDSEA
SHTGDSSGLSSQCEILNTQQREAMRNNLDNLQREMAALEAVLEQRGSQSPASGRKQASTV
EHVTKRPQEAQEKQADDEAYQSPDAIPETAQGAASGRQSTEHPPPVGIRSRSPTPPLSLP
QMPSRKETPEKICASFNVFKELKESTLTDDESMGQKGDVLHAHESVPDCAPPASSLKNSK
SPKRSLRSKLQAANSHSTFSRGSTRQSPQQSSKQPSSTPRSSSPTFSSPLRSKVAPSVKS
PVVSRKRNYCLVTSGLSQGEVILVQKFARKTQSIFSSQMSELTTHVIMKTDEHLVCERTL
KYFLGVAGRKWVVSYEWIEQSFREGRILDEYDFEVKGDVINGKNHRGPRRSRLGSDGLLL
TDFEICCLGSFKDMARDDLECMVSLCGASVARDPSQFEHKSGMTSLVVVQPDKETDYPAM
RKKYRCLVITREWVLDSVSSYKLQAFDSYLM
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtgccaccatggatgttgaggacattcacaatgtcctgtccgtcatgcagaag
aacttggaatgtcccatttgcttggacctgatgaaggagcctgtggccaccagatgtgat
catatattttgcaggttttgcatgttgcagcttctcggcaagaagaagaaaggtcgggcc
gagtgtcctctgtgcaagaaagaagttactaaaagaagtctccaagatagtcctaggttc
aagctcctggttaatggtctgctgaaaattataaacgcctttgagctggactctgggtac
aaattttttccaagtcaggactatgccagtactgtcgcagcaagccataaagagacactg
aaaaaagatgaccaacctgtggtgcagagcactgggtacaggaaccgaaccaggagggga
atattgaatggaggaccttatgaagaccacttgtccttgctggaaaccagcgctgacacg
ccgctcgcgagggacgcagacacgtggaactgtaagcagcctaagcggcagaagaaagac
accaagcagctaatcacagacttggtgtctgactcctccgaagatgatctattcaagaga
gcaggcagcttgggaagttttgctggtgaaccaaacatgtcatgtgagcccctagtatcc
ctggattctgagaaaaaagaagactccccgatggccaatgaagcaactgatcaggttcct
tctaagctggagtcagaagatgtggcagcatcggatctagctgaatatggattttctgaa
agagaccttgagagccttagaagcaatttattgtccattgagggcgtccgaacccttaga
gagtcgcccagtgaaaagtctgcagtagttagagaccctttattatctgataaagacttt
tgccaaaaagtgggcgaacaaggctcacacagaaaactcgatgagaatgtaggaagctca
aaactcacagagcacaatgccagaatgcagatggaaaggcaaccgtccagtgaaagtcag
actttgaaaattgcaattgattttcaatatgatcgagaagactctacccctgaaaacatg
ggtagcactcagggtagtccaagggatgcctcatgtgcagtgtccagagaaagggttaag
aaaagtattaaaaaagtcaatgagtggctactgaagacagatgatcttttgtataattca
agggatgttgagttgctaactgatgtctctcagattgaagatccggatgcttctgacaaa
gcttccaatgtgtctgatgagacagaaattatggctgtgtctcatcgtcatgttgtggcg
gatgctgttgaaaagagtatggttagtgctgaggataggatattcggtcgagtgtacaaa
cgggagaaaaagccaagcctagtaggtaaagtgacatgcgttgctgatgtccacgtagat
ggtgttggggggtccttaaaagtaaatgaggttcccaaaattgccactttaaagccaaaa
aggagtgctggtcttctgcctgaacactttatcaagagagttgacgaaaaggaagggaat
gacgatagtattgtcagtggggcagtggttgtggacgattttgggttggatgtggaaatc
agtcagctgaaagcctcaaatgccttattggatgctgataaaatagaggtgataggtcca
gatttggaaaccttttcggatgctcagtcaaataaaccaaagaagcagaagaagcccttg
aaaaggaagtctgagaagaccaaacgcacgcagatgatccagactctccatttgactaaa
ggaacagatgtagactcatgccaacagcaaagtcctcatttatctgaagtaaaaattgac
agctatccaagtagcactgaactgggacatgaagttaaccagaaaaacgttaggcggagt
aaaagacttaatttgttcaaagaaaatgattttcccttctgttcaaatcagatggtggca
gttatgaatattaaagacaatagggctgaggggccgcctatccaaaatcctccagacaac
atgcctaccctagtcaactgtgaagagccatgtttagattctgctgtgttagaagaccca
ggaccccaaattaatggcaagtcaccagatgcagtccaaaatgggaccattgtagtaaat
ggaagttcacacatgaagtgtgattctcctcatgtggcaagagagatgtgcaatggatcc
tctccaatgccaaagcaggatgcagaacctgtggtaaacgcagtggatgtggaagactct
gaccttgacacacaactcctgttaaagacattcaaaagtgccaaaaggatgtccttcaaa
ctagatccagttactgaaactgctaataatgataattgtgacttaatggacatctgtgaa
attaacaccagcttaacaaataaacagggtaaaaatgaaaagtgcaaatctgaggaaaac
caatgtaatggtcaagaaatccagccggagcactcaagaaagctgagatctaaaaaaaat
tccagattatcttctaaacacaatgggatgagttcagctgagaacacagaaagcgtaata
gtacttacgactaagactataaaagcagatgacgtggagccccttgaaaactgtaatcct
gctaaaaatgctgctgtaagtaagattaagggatcgccgttgcttttagaaaccgaaacg
atctctctgtaccctatagttactcatcaaaattctgctgcagccaagcgaggagacact
agaagtaggaccgctcaaggagaaaatgagcaagcaaagaacgattgttatcagaactgc
agttttgatgaagagcaggcaaatcaaattacttcttctaatagttctcaggggtcgtgg
acagggaaactactaggccatgcagtgtctcataatagaagtcctgaagttgactcagag
acgcctgatggattgttgggtagcgttgacggacttcaaaaagatacaagttactgtgct
gtagctgaaaagtcatttgtctttggagccgacaagaagtcacaattgcttgaccgcccc
gtgtctcctgtcatccagtcacaagttgtaagaagtcgaaaacgtagagtgcaaaagtta
gaatcttccgaagaagagtcaagtggagatgaggagttgccttgtttaaacatattattt
ggcaacgcctcaactgttgctgacccgaaaaatacatctgccagttcctcacccaagcag
caaggtggcggtgtcctggcaatgtttagtagctgcagcactagtagcaaaactcagact
agcttcaatctcccacgtaacgctttggtatgtagtcaggaatctcagtgttctgtgaat
ttgttctcttctcagtcaaacacatctgatcactctatgaatggagccacaggtacacac
aaccagcataggactcaggagagtagtccaaaaagagcaagggtggaagtgtatggtaat
gaggacaaaatgacgaacttggagaatgagggagaagaaatgactattgtggagaatgat
tgtgaagacccatgccaagaacataatttaggtgacgtctctggatgcgatagcgaggcc
agtcacacgggggactcttctgggctgtcttctcagtgtgaaatcctcaatacacagcag
cgggaggccatgcgaaacaatttagataaccttcagagggaaatggctgccctggaagcg
gttttggaacagcgtggtagccagagtcctgcttctgggaggaagcaagcatccacagtg
gagcatgtcaccaagagaccacaggaggcccaggagaaacaagcagacgatgaagcttat
caatctcctgatgcgatccccgagacggcacagggtgcggcatctggacgacaaagcacc
gaacatccacctccagtaggaatccggtcaaggtcaccgactccaccccttagccttcct
cagatgccatcaaggaaagagactccagagaaaatctgtgcttctttcaatgtgttcaaa
gagctgaaggaatccaccctaacagatgacgaatcaatgggtcagaaaggagatgttctc
catgctcatgagtcagttccagattgtgcaccgcctgcatccagcctgaaaaattccaag
tctcccaaacgaagcctgaggagtaaactgcaagcagcaaatagccatagcactttcagt
agaggaagcactagacaatcgccgcagcaatcaagcaagcaaccgagtagcactccgaga
agctcgtcgcccacattttcatcacccttaaggagtaaagtagctccttcagtcaagagt
cctgtagtttctaggaaaagaaactattgtcttgtgacatccggcttgagtcaaggtgaa
gtgattctggttcagaagtttgcacggaaaacccaaagcatcttttccagccaaatgtca
gaattgaccactcacgtcatcatgaaaacagatgaacatcttgtgtgtgaaaggactttg
aaatattttctgggagttgccggtagaaaatgggtggttagctatgaatggattgaacag
tcgttccgagaggggagaattcttgatgagtatgactttgaagtgaagggagacgtgatc
aatggaaaaaatcatagaggtcccagaagatcaagactaggatcagatggactgctgctg
acagactttgagatttgctgtcttggttctttcaaagatatggctagagatgatttggag
tgcatggtttcattgtgcggggcatctgtggcacgtgacccatcacagtttgaacataaa
tcagggatgacatctctagtggtggtccagccagataaagagacagactatccagccatg
aggaagaagtaccgttgtcttgtgattactcgtgaatgggtgctggacagcgtgtcaagt
tataaacttcaggcattcgacagttaccttatgtga
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integrated database retrieval system
